Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1625

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
1,876,202	+		Echvi_1624	0.88	+1.1
1,876,203	-		Echvi_1624	0.88	-0.7
1,876,203	-		Echvi_1624	0.88	-2.3
1,876,251	+		Echvi_1624	0.90	+0.8
1,876,260	+		Echvi_1624	0.90	-0.6
1,876,260	+		Echvi_1624	0.90	-0.8
1,876,325	+				-0.5
1,876,358	+				-0.4
1,876,369	+				+0.2
1,876,492	+				-1.3
1,876,554	-				-1.3
1,876,569	-				-1.6
1,876,569	-				-0.4
1,876,569	-				-0.1
1,876,744	+				-0.1
1,876,744	+				+0.1
1,876,745	-				+0.5
1,876,781	+				+0.1
1,876,781	+				-0.9
1,876,782	-				-0.4
1,876,782	-				+0.2
1,876,782	-				+0.1
1,876,797	-				-0.9
1,876,846	+				+0.0
1,876,852	-				-0.2
1,876,864	+				+0.3
1,876,865	-				-1.3
1,876,869	+				+0.2
1,876,870	-				+0.3
1,876,903	-				-1.7
1,876,903	-				+0.7
1,876,903	-				+0.7
1,876,916	+				+0.1
1,876,917	-				+0.2
1,876,917	-				+0.7
1,876,922	+				-0.4
1,876,922	+				-0.3
1,876,923	-				+0.6
1,876,975	-				-0.1
1,877,086	+				-0.3
1,877,087	-				-0.1
1,877,087	-				+1.2
1,877,111	+				-3.2
1,877,119	+				+0.1
1,877,137	+				-1.0
1,877,216	+				-0.4
1,877,263	+		Echvi_1625	0.11	+0.8
1,877,373	-		Echvi_1625	0.18	+0.2
1,877,406	+		Echvi_1625	0.21	+0.4
1,877,407	-		Echvi_1625	0.21	+0.5
1,877,504	-		Echvi_1625	0.28	+1.2
1,877,612	-		Echvi_1625	0.35	+0.2
1,877,669	+		Echvi_1625	0.39	+1.1
1,877,669	+		Echvi_1625	0.39	-0.6
1,877,669	+		Echvi_1625	0.39	-0.3
1,877,669	+		Echvi_1625	0.39	+0.8
1,877,671	+		Echvi_1625	0.39	-0.1
1,877,724	+		Echvi_1625	0.43	-0.7
1,877,912	-		Echvi_1625	0.56	+1.2
1,878,081	-		Echvi_1625	0.68	+0.2
1,878,105	-		Echvi_1625	0.70	-0.0
1,878,105	-		Echvi_1625	0.70	-0.3
1,878,239	+		Echvi_1625	0.79	+0.3
1,878,240	-		Echvi_1625	0.79	-0.1
1,878,240	-		Echvi_1625	0.79	+0.3
1,878,262	+				+0.9
1,878,325	-		Echvi_1625	0.85	-1.3
1,878,332	+		Echvi_1625	0.86	+2.2
1,878,332	+		Echvi_1625	0.86	+1.4
1,878,333	-		Echvi_1625	0.86	-0.5
1,878,333	-		Echvi_1625	0.86	+0.2
1,878,333	-		Echvi_1625	0.86	-1.1
1,878,333	-		Echvi_1625	0.86	+0.2
1,878,341	+		Echvi_1625	0.86	-0.8
1,878,341	+		Echvi_1625	0.86	+0.9
1,878,341	+		Echvi_1625	0.86	+1.0
1,878,341	+		Echvi_1625	0.86	-1.1
1,878,342	-		Echvi_1625	0.86	-0.4
1,878,342	-		Echvi_1625	0.86	+0.4
1,878,342	-		Echvi_1625	0.86	-2.0
1,878,342	-		Echvi_1625	0.86	+0.2
1,878,342	-		Echvi_1625	0.86	-1.1
1,878,342	-		Echvi_1625	0.86	-0.7
1,878,342	-		Echvi_1625	0.86	+0.4
1,878,342	-		Echvi_1625	0.86	-0.1
1,878,344	+		Echvi_1625	0.87	+1.0
1,878,392	+				+1.0
1,878,415	+				+0.4
1,878,416	-				-0.3
1,878,433	-				-0.8
1,878,525	-				+0.9
1,878,526	+				-1.2
1,878,527	-				+0.2
1,878,527	-				-0.7
1,878,527	-				+1.6
1,878,527	-				-0.1
1,878,527	-				+0.6
1,878,540	+				+0.4
1,878,540	+				+1.4
1,878,540	+				-0.6
1,878,540	+				-0.6
1,878,541	-				+0.1
1,878,547	+				-1.4
1,878,564	+				-1.6
1,878,565	-				-0.6
1,878,572	-				-0.2
1,878,572	-				+0.9
1,878,579	-				+0.9
1,878,579	-				+0.3
1,878,579	-				-1.7
1,878,585	+				-0.4
1,878,588	+				-1.2
1,878,589	-				+0.5
1,878,589	-				-0.4
1,878,873	+				+0.4
1,878,873	+				+1.9
1,878,929	-		Echvi_1626	0.15	-0.4
1,879,081	+		Echvi_1626	0.29	+3.5
1,879,167	+		Echvi_1626	0.37	-0.5
1,879,168	-		Echvi_1626	0.37	-1.0
1,879,214	+		Echvi_1626	0.42	-0.4
1,879,215	-		Echvi_1626	0.42	+0.4
1,879,215	-		Echvi_1626	0.42	-0.6
1,879,215	-		Echvi_1626	0.42	-0.7
1,879,235	+		Echvi_1626	0.44	+0.8
1,879,236	-		Echvi_1626	0.44	-0.8
1,879,243	+		Echvi_1626	0.44	-0.1
1,879,244	-		Echvi_1626	0.45	-0.9
1,879,263	+		Echvi_1626	0.46	+0.5
1,879,264	-		Echvi_1626	0.46	-1.6
1,879,266	+		Echvi_1626	0.47	+0.6
1,879,267	-		Echvi_1626	0.47	-0.4
1,879,365	+		Echvi_1626	0.56	-2.5
1,879,366	-		Echvi_1626	0.56	-0.7
1,879,478	-		Echvi_1626	0.66	-0.0