Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1424

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
1,635,141	+				-1.5
1,635,195	+		Echvi_1422	0.10	+0.5
1,635,196	-		Echvi_1422	0.11	+0.1
1,635,269	-		Echvi_1422	0.25	+0.1
1,635,338	+		Echvi_1422	0.38	+0.2
1,635,511	-		Echvi_1422	0.71	+1.4
1,635,511	-		Echvi_1422	0.71	+0.8
1,635,669	-				+0.2
1,635,813	+		Echvi_1423	0.34	-0.7
1,635,844	-		Echvi_1423	0.41	-0.3
1,635,845	+		Echvi_1423	0.41	-1.8
1,635,996	-		Echvi_1423	0.78	-1.7
1,636,027	+		Echvi_1423	0.85	-0.4
1,636,030	+		Echvi_1423	0.86	+0.0
1,636,030	+		Echvi_1423	0.86	-1.0
1,636,077	+				+1.2
1,636,115	-				-0.0
1,636,164	+		Echvi_1424	0.17	-0.4
1,636,164	+		Echvi_1424	0.17	+1.0
1,636,164	+		Echvi_1424	0.17	+0.5
1,636,172	+		Echvi_1424	0.19	+0.1
1,636,172	+		Echvi_1424	0.19	-0.6
1,636,172	+		Echvi_1424	0.19	+2.0
1,636,361	+		Echvi_1424	0.65	+0.3
1,636,362	-		Echvi_1424	0.65	+0.1
1,636,365	+		Echvi_1424	0.66	-0.1
1,636,365	+		Echvi_1424	0.66	-0.1
1,636,365	+		Echvi_1424	0.66	+0.4
1,636,365	+		Echvi_1424	0.66	+0.4
1,636,366	-		Echvi_1424	0.66	+0.2
1,636,366	-		Echvi_1424	0.66	-0.5
1,636,366	-		Echvi_1424	0.66	-1.5
1,636,478	-				+1.5
1,636,484	-				-1.7
1,636,523	+				-0.6
1,636,524	-				+0.7
1,636,525	+				-1.4
1,636,526	-				-0.5
1,636,527	+				-0.2
1,636,536	-				-0.8
1,636,536	-				-0.3
1,636,536	-				-0.6
1,636,543	+				+2.3
1,636,548	+				+0.5
1,636,568	+				+0.5
1,636,568	+				-0.8
1,636,568	+				+0.1
1,636,569	-				-1.1
1,636,608	+				+1.5
1,636,630	+				-1.0
1,636,630	+				-0.5
1,636,659	-				+1.7
1,636,673	-				-1.4
1,636,673	-				+1.4
1,636,673	-				-0.8
1,636,747	+		Echvi_1425	0.13	-0.4
1,636,748	-		Echvi_1425	0.13	-0.6
1,636,757	-		Echvi_1425	0.14	-1.7
1,636,833	-		Echvi_1425	0.21	-1.4
1,636,917	-		Echvi_1425	0.30	-0.8
1,636,928	+		Echvi_1425	0.31	+0.0
1,636,929	-		Echvi_1425	0.31	-0.8
1,637,103	+		Echvi_1425	0.48	+0.4
1,637,103	+		Echvi_1425	0.48	+0.2
1,637,104	-		Echvi_1425	0.49	-0.0
1,637,146	-		Echvi_1425	0.53	+0.1
1,637,202	-		Echvi_1425	0.58	-1.6
1,637,210	+		Echvi_1425	0.59	+0.6
1,637,278	+		Echvi_1425	0.66	+0.0
1,637,298	-		Echvi_1425	0.68	+1.6
1,637,298	-		Echvi_1425	0.68	+1.1
1,637,319	-		Echvi_1425	0.70	-0.1
1,637,363	+		Echvi_1425	0.75	-0.1
1,637,402	+		Echvi_1425	0.79	-0.6
1,637,402	+		Echvi_1425	0.79	+0.5
1,637,403	-		Echvi_1425	0.79	-0.0
1,637,417	+		Echvi_1425	0.80	+0.4
1,637,417	+		Echvi_1425	0.80	+0.3
1,637,417	+		Echvi_1425	0.80	-0.5
1,637,418	-		Echvi_1425	0.80	-1.0
1,637,418	-		Echvi_1425	0.80	-0.8
1,637,418	-		Echvi_1425	0.80	+0.5
1,637,418	-		Echvi_1425	0.80	-1.2
1,637,418	-		Echvi_1425	0.80	+1.2
1,637,485	+		Echvi_1425	0.87	-0.7
1,637,485	+				-0.0
1,637,485	+		Echvi_1425	0.87	+0.4
1,637,490	+		Echvi_1425	0.87	+0.3
1,637,491	-		Echvi_1425	0.87	+0.2
1,637,491	-		Echvi_1425	0.87	-0.4
1,637,503	-		Echvi_1425	0.89	+1.0