Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0699
Experiment: m.b. Chloramphenicol 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.005 mg/ml |
---|---|---|---|---|---|
remove | |||||
789,520 | + | Echvi_0698 | 0.72 | -0.4 | |
789,617 | + | Echvi_0698 | 0.82 | -0.4 | |
789,655 | + | Echvi_0698 | 0.86 | -1.1 | |
789,750 | - | +0.8 | |||
789,750 | - | +0.4 | |||
789,750 | - | +0.2 | |||
789,782 | + | +0.6 | |||
789,827 | + | +1.0 | |||
789,827 | + | -0.4 | |||
789,829 | + | +0.3 | |||
789,829 | + | +1.0 | |||
789,830 | - | +0.8 | |||
789,901 | + | -0.5 | |||
789,901 | + | +1.1 | |||
789,951 | - | -0.1 | |||
789,983 | - | -0.5 | |||
790,017 | + | +1.0 | |||
790,018 | - | +2.0 | |||
790,116 | - | +0.7 | |||
790,168 | + | -0.7 | |||
790,186 | - | +0.4 | |||
790,186 | - | -0.3 | |||
790,186 | - | +0.8 | |||
790,202 | - | -0.5 | |||
791,600 | + | +0.1 | |||
791,646 | + | +0.1 | |||
791,647 | - | +0.3 | |||
791,647 | - | -0.5 | |||
791,691 | + | -1.0 | |||
791,759 | - | -1.1 | |||
791,759 | - | +1.2 | |||
791,814 | - | -0.6 | |||
791,835 | - | +0.5 | |||
791,874 | + | -1.4 | |||
791,953 | + | +2.0 |
Or see this region's nucleotide sequence