Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0069

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
69,288	-				+0.6
69,360	+				+0.8
69,361	-				+0.2
69,379	+				-0.2
69,388	-				-0.6
69,388	-				-0.0
69,392	-				-1.1
69,535	-				+0.4
69,565	+		Echvi_0068	0.10	+1.1
69,603	+		Echvi_0068	0.15	-0.9
69,622	+		Echvi_0068	0.18	-0.2
69,623	-		Echvi_0068	0.18	+0.6
69,730	+		Echvi_0068	0.32	-0.8
69,731	-		Echvi_0068	0.33	-0.3
69,760	-		Echvi_0068	0.36	-0.0
69,792	+		Echvi_0068	0.41	+0.0
69,792	+		Echvi_0068	0.41	+0.0
69,796	-		Echvi_0068	0.41	+0.1
69,863	-		Echvi_0068	0.50	-0.7
69,896	+		Echvi_0068	0.55	+0.8
69,897	-		Echvi_0068	0.55	+0.3
69,897	-		Echvi_0068	0.55	+0.4
69,897	-		Echvi_0068	0.55	+0.4
70,004	-		Echvi_0068	0.70	+1.8
70,004	-		Echvi_0068	0.70	-0.3
70,016	+		Echvi_0068	0.71	+1.5
70,094	+		Echvi_0068	0.82	+0.4
70,095	-		Echvi_0068	0.82	+0.9
70,095	-		Echvi_0068	0.82	+0.8
70,096	+		Echvi_0068	0.82	+0.8
70,134	-		Echvi_0068	0.87	-0.1
70,331	-				+0.6
70,457	+		Echvi_0069	0.23	-0.2
70,458	-		Echvi_0069	0.23	-0.4
70,461	+		Echvi_0069	0.23	+0.8
70,462	-		Echvi_0069	0.24	-2.9
70,462	-		Echvi_0069	0.24	-0.1
70,462	-		Echvi_0069	0.24	-0.3
70,462	-		Echvi_0069	0.24	+0.3
70,474	-		Echvi_0069	0.25	-0.6
70,508	+		Echvi_0069	0.30	+0.4
70,510	+		Echvi_0069	0.30	-0.8
70,510	+		Echvi_0069	0.30	+0.3
70,517	-		Echvi_0069	0.31	-0.2
70,521	-		Echvi_0069	0.31	-0.2
70,530	-		Echvi_0069	0.32	+0.1
70,552	-		Echvi_0069	0.35	-0.2
70,553	+		Echvi_0069	0.35	-0.5
70,553	+		Echvi_0069	0.35	-1.0
70,553	+		Echvi_0069	0.35	+1.1
70,554	-		Echvi_0069	0.35	-0.5
70,568	-		Echvi_0069	0.37	-0.5
70,599	-		Echvi_0069	0.41	+0.3
70,618	-		Echvi_0069	0.44	+0.3
70,690	+		Echvi_0069	0.53	-2.4
70,694	+		Echvi_0069	0.53	+0.3
70,784	+		Echvi_0069	0.65	-1.1
70,784	+		Echvi_0069	0.65	+0.1
70,784	+		Echvi_0069	0.65	-1.7
70,801	-		Echvi_0069	0.67	+1.4
70,801	-		Echvi_0069	0.67	+2.8
70,801	-		Echvi_0069	0.67	-1.7
70,984	+				+1.5
71,047	-				-0.1
71,050	+				+0.1
71,050	+				+0.5
71,050	+				-0.6
71,050	+				+0.7
71,050	+				+0.6
71,050	+				-0.5
71,051	-				+0.2
71,051	-				+0.0
71,051	-				-0.5
71,051	-				+1.4
71,051	-				-0.0
71,052	+				+1.1
71,053	-				+0.7
71,153	+		Echvi_0070	0.14	+0.1
71,153	+		Echvi_0070	0.14	-0.8
71,154	-		Echvi_0070	0.14	-0.2
71,186	+		Echvi_0070	0.19	+0.7
71,187	-		Echvi_0070	0.19	+0.1
71,189	+		Echvi_0070	0.20	-1.3
71,192	+		Echvi_0070	0.20	-0.1
71,193	-		Echvi_0070	0.20	+1.1
71,211	+		Echvi_0070	0.23	+1.4
71,211	+		Echvi_0070	0.23	+1.1
71,357	-		Echvi_0070	0.47	-0.9
71,363	+		Echvi_0070	0.48	-1.7
71,363	+		Echvi_0070	0.48	-1.0
71,364	-		Echvi_0070	0.48	-1.9
71,392	-		Echvi_0070	0.52	+0.5
71,392	-		Echvi_0070	0.52	-0.2
71,400	+		Echvi_0070	0.54	-0.4
71,411	+		Echvi_0070	0.56	-0.2
71,414	-		Echvi_0070	0.56	+0.5
71,415	+		Echvi_0070	0.56	+2.6
71,416	-		Echvi_0070	0.56	+1.0
71,426	+		Echvi_0070	0.58	+1.8
71,426	+		Echvi_0070	0.58	+0.3
71,426	+		Echvi_0070	0.58	+0.6
71,492	-		Echvi_0070	0.69	+0.5
71,492	-		Echvi_0070	0.69	+0.3
71,492	-		Echvi_0070	0.69	+0.3
71,493	+		Echvi_0070	0.69	-0.0
71,493	+		Echvi_0070	0.69	+1.0
71,494	-		Echvi_0070	0.69	+0.2
71,494	-		Echvi_0070	0.69	+0.6
71,508	-		Echvi_0070	0.71	-0.1
71,508	-		Echvi_0070	0.71	+1.0
71,508	-		Echvi_0070	0.71	+0.4
71,513	+		Echvi_0070	0.72	+0.3
71,514	-		Echvi_0070	0.72	+0.3
71,514	-		Echvi_0070	0.72	-1.2
71,514	-		Echvi_0070	0.72	+0.5
71,621	+		Echvi_0070	0.89	+0.0
71,665	+				-0.3
71,666	-				+0.5
71,666	-				-0.2
71,687	+				+1.1
71,687	+				-1.2