Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4583

Experiment: m.b. Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.001 mg/ml
5,488,392	+		Echvi_4582	0.83	+1.4
5,488,394	-		Echvi_4582	0.83	+0.2
5,488,465	+				-1.7
5,488,466	-				-0.1
5,488,466	-				-1.3
5,488,467	+				-0.8
5,488,530	+				-0.3
5,488,535	+				-0.1
5,488,536	-				-0.3
5,488,612	+				+0.3
5,488,678	+				-1.2
5,488,689	+				+1.6
5,488,689	+				+0.3
5,488,690	-				+1.7
5,488,690	-				-0.4
5,488,751	+				-1.6
5,488,751	+				-0.0
5,488,751	+				-0.4
5,488,776	-				+0.7
5,488,797	+				-0.2
5,488,797	+				+1.3
5,488,797	+				+0.5
5,488,797	+				+1.1
5,488,797	+				-0.8
5,488,797	+				+0.5
5,488,798	-				-0.1
5,488,798	-				-0.4
5,488,798	-				+1.0
5,488,798	-				-0.8
5,488,798	-				-0.7
5,488,800	-				-0.1
5,488,800	-				-0.3
5,488,801	+				+1.9
5,488,802	-				+1.1
5,488,927	+				+0.0
5,488,928	-				-0.4
5,488,950	-				-0.4
5,488,985	-				-0.7
5,489,040	-				-0.1
5,489,253	-				+0.5
5,489,321	+				-0.6
5,489,321	+				+0.5
5,489,322	-				-0.1
5,489,327	+				-0.7
5,489,328	-				-1.3
5,489,422	+				+0.4
5,489,424	+				+0.8
5,489,424	+				-1.9
5,489,425	-				+0.5
5,489,705	-		Echvi_4583	0.27	+0.1
5,489,705	-		Echvi_4583	0.27	+0.6
5,489,722	+		Echvi_4583	0.28	+0.6
5,490,141	+		Echvi_4583	0.60	-1.5
5,490,142	-		Echvi_4583	0.60	-2.7
5,490,194	-		Echvi_4583	0.64	-0.4
5,490,217	+		Echvi_4583	0.65	-0.6
5,490,218	-		Echvi_4583	0.65	-0.5
5,490,225	+		Echvi_4583	0.66	-0.1
5,490,226	-		Echvi_4583	0.66	-0.3
5,490,228	-		Echvi_4583	0.66	-0.3
5,490,375	+		Echvi_4583	0.77	-0.9
5,490,376	-		Echvi_4583	0.77	+1.1
5,490,439	+		Echvi_4583	0.82	-0.7
5,490,439	+		Echvi_4583	0.82	+0.7
5,490,439	+		Echvi_4583	0.82	-0.4
5,490,516	+		Echvi_4583	0.88	-0.3
5,490,517	-		Echvi_4583	0.88	-0.7
5,490,517	-		Echvi_4583	0.88	-1.1
5,490,517	-		Echvi_4583	0.88	-1.1
5,490,517	-		Echvi_4583	0.88	-1.2
5,490,517	-		Echvi_4583	0.88	-0.6
5,490,597	+				+0.0
5,490,598	-				-0.9
5,490,645	+				+1.7
5,490,645	+				-0.8
5,490,646	-				-0.2
5,490,668	+				+0.2
5,490,729	-				-0.9
5,490,980	-		Echvi_4584	0.22	-0.9
5,490,983	+		Echvi_4584	0.23	+0.2
5,490,983	+		Echvi_4584	0.23	-0.7
5,491,005	-		Echvi_4584	0.24	-0.6
5,491,028	+		Echvi_4584	0.26	+1.5
5,491,029	-		Echvi_4584	0.26	+0.3
5,491,208	-		Echvi_4584	0.39	-0.1
5,491,240	-		Echvi_4584	0.41	+0.4