Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4274

Experiment: m.b. Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.001 mg/ml
5,123,080	+		Echvi_4271	0.72	+0.8
5,123,105	-		Echvi_4271	0.79	+1.0
5,123,112	-		Echvi_4271	0.81	+0.7
5,123,138	-		Echvi_4271	0.88	-0.7
5,123,154	-				-0.3
5,123,240	-		Echvi_4272	0.17	-1.3
5,123,244	+		Echvi_4272	0.18	+0.5
5,123,268	+		Echvi_4272	0.24	+1.2
5,123,274	+		Echvi_4272	0.26	-0.2
5,123,275	-		Echvi_4272	0.26	+1.2
5,123,305	-		Echvi_4272	0.34	-0.3
5,123,305	-		Echvi_4272	0.34	-1.1
5,123,305	-		Echvi_4272	0.34	+0.3
5,123,336	+		Echvi_4272	0.42	-0.1
5,123,371	-		Echvi_4272	0.51	+2.7
5,123,371	-		Echvi_4272	0.51	-1.2
5,123,437	+		Echvi_4272	0.68	-0.6
5,123,437	+		Echvi_4272	0.68	-0.1
5,123,438	-		Echvi_4272	0.68	+0.0
5,123,438	-		Echvi_4272	0.68	+0.3
5,123,449	-		Echvi_4272	0.71	-0.7
5,123,523	+				+1.5
5,123,523	+				-0.3
5,123,523	+				-0.4
5,123,524	-				+0.9
5,123,527	+				+0.1
5,123,528	-				+0.4
5,123,567	+				-0.6
5,123,686	+		Echvi_4273	0.26	+0.3
5,123,737	+		Echvi_4273	0.37	-0.0
5,123,737	+		Echvi_4273	0.37	+1.3
5,123,799	+		Echvi_4273	0.50	-0.7
5,123,799	+		Echvi_4273	0.50	+0.3
5,123,821	-		Echvi_4273	0.55	-0.3
5,123,827	+		Echvi_4273	0.56	+0.4
5,123,858	+		Echvi_4273	0.63	+0.2
5,123,859	-		Echvi_4273	0.63	-0.6
5,123,859	-		Echvi_4273	0.63	+0.6
5,123,898	+		Echvi_4273	0.71	-0.9
5,123,934	-		Echvi_4273	0.79	+1.2
5,123,934	-		Echvi_4273	0.79	+0.4
5,123,943	-		Echvi_4273	0.81	+0.2
5,123,944	+		Echvi_4273	0.81	-1.5
5,123,974	+		Echvi_4273	0.88	-0.0
5,123,975	-		Echvi_4273	0.88	-0.3
5,123,976	+		Echvi_4273	0.88	+0.2
5,123,976	+		Echvi_4273	0.88	-0.2
5,123,976	+		Echvi_4273	0.88	+0.0
5,123,977	-		Echvi_4273	0.88	-1.0
5,124,030	+				+1.7
5,124,030	+				-0.3
5,124,030	+				-0.5
5,124,031	-				-1.3
5,124,041	+				-0.6
5,124,065	-				+0.2
5,124,127	+		Echvi_4274	0.27	-1.0
5,124,161	+		Echvi_4274	0.38	-0.4
5,124,300	+		Echvi_4274	0.81	-0.3
5,124,304	+		Echvi_4274	0.82	-0.9
5,124,420	+				+1.0
5,124,420	+				-0.4
5,124,425	+				-0.2
5,124,425	+				-0.3
5,124,425	+				-0.7
5,124,425	+				+0.3
5,124,426	-				+0.4
5,124,426	-				-0.9
5,124,449	+				-0.2
5,124,556	+		Echvi_4275	0.19	+0.1
5,124,641	+		Echvi_4275	0.39	-0.8
5,124,648	+		Echvi_4275	0.41	-0.3
5,124,649	-		Echvi_4275	0.41	-0.7
5,124,661	+		Echvi_4275	0.44	+0.0
5,124,675	+				+3.2
5,124,797	+		Echvi_4275	0.76	+0.3
5,124,822	+		Echvi_4275	0.81	-1.3
5,124,900	-				-0.5
5,124,924	+				-0.5
5,124,925	-				+0.6
5,124,925	-				-1.3
5,124,925	-				+0.1
5,124,927	+				+0.7
5,124,932	+				+1.0
5,124,948	-				-0.3
5,124,961	+		Echvi_4276	0.14	+0.2
5,124,970	+		Echvi_4276	0.18	-0.2
5,124,983	+		Echvi_4276	0.23	-0.7
5,124,983	+		Echvi_4276	0.23	+0.5
5,124,991	+		Echvi_4276	0.27	-0.5
5,124,991	+		Echvi_4276	0.27	+0.2
5,124,991	+		Echvi_4276	0.27	+1.0
5,124,992	-		Echvi_4276	0.27	-0.3
5,124,992	-		Echvi_4276	0.27	-0.0
5,125,021	+		Echvi_4276	0.39	+1.7
5,125,049	-		Echvi_4276	0.51	-1.8
5,125,194	+				-0.6
5,125,195	-				-0.0
5,125,348	-		Echvi_4277	0.46	+0.3
5,125,348	-		Echvi_4277	0.46	-0.2
5,125,350	-		Echvi_4277	0.47	+1.2
5,125,355	+		Echvi_4277	0.48	+1.3
5,125,356	-		Echvi_4277	0.48	-0.5
5,125,356	-		Echvi_4277	0.48	+0.0
5,125,356	-		Echvi_4277	0.48	-0.2
5,125,356	-		Echvi_4277	0.48	-1.5
5,125,356	-		Echvi_4277	0.48	+0.1
5,125,356	-		Echvi_4277	0.48	+1.2
5,125,358	+		Echvi_4277	0.49	-0.3
5,125,358	+		Echvi_4277	0.49	+0.0
5,125,358	+		Echvi_4277	0.49	-0.3
5,125,359	-		Echvi_4277	0.49	+0.9