Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4112

Experiment: m.b. Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.001 mg/ml
4,925,592	+				-1.2
4,925,593	-				-0.2
4,925,597	-				-0.8
4,925,647	+				+0.1
4,925,648	-				+0.2
4,925,705	+				+0.0
4,925,750	+				+0.4
4,925,757	+				-0.7
4,925,757	+				-0.3
4,925,758	-				-0.3
4,925,776	+				-0.2
4,925,782	+				-0.6
4,925,790	-				-0.7
4,925,790	-				-0.4
4,925,793	+				+0.2
4,925,809	+		Echvi_4111	0.11	-0.9
4,925,809	+		Echvi_4111	0.11	+0.1
4,925,810	-		Echvi_4111	0.11	-0.9
4,925,814	+		Echvi_4111	0.12	-0.8
4,925,814	+		Echvi_4111	0.12	+0.2
4,925,815	-		Echvi_4111	0.12	-0.8
4,925,837	+		Echvi_4111	0.15	+0.4
4,925,838	-		Echvi_4111	0.15	-0.8
4,925,838	-		Echvi_4111	0.15	+0.2
4,925,850	+		Echvi_4111	0.16	+0.0
4,925,863	+		Echvi_4111	0.18	-0.8
4,925,864	-		Echvi_4111	0.18	-1.4
4,925,919	-		Echvi_4111	0.25	-0.8
4,925,941	-		Echvi_4111	0.28	-1.8
4,925,987	-		Echvi_4111	0.33	-0.5
4,926,032	-		Echvi_4111	0.39	+0.4
4,926,051	-		Echvi_4111	0.41	-0.0
4,926,051	-		Echvi_4111	0.41	-0.7
4,926,051	-		Echvi_4111	0.41	+0.2
4,926,054	+		Echvi_4111	0.42	-0.5
4,926,055	-		Echvi_4111	0.42	-0.1
4,926,055	-		Echvi_4111	0.42	-0.4
4,926,055	-		Echvi_4111	0.42	-2.0
4,926,086	+		Echvi_4111	0.46	+0.0
4,926,164	+		Echvi_4111	0.55	+0.2
4,926,164	+		Echvi_4111	0.55	+1.4
4,926,164	+		Echvi_4111	0.55	+1.3
4,926,178	+		Echvi_4111	0.57	+0.5
4,926,250	+		Echvi_4111	0.66	+1.0
4,926,250	+		Echvi_4111	0.66	+0.5
4,926,250	+		Echvi_4111	0.66	-0.3
4,926,250	+		Echvi_4111	0.66	+0.7
4,926,251	-		Echvi_4111	0.66	+0.0
4,926,251	-		Echvi_4111	0.66	-0.6
4,926,296	-		Echvi_4111	0.71	-0.0
4,926,313	+		Echvi_4111	0.74	+0.4
4,926,313	+		Echvi_4111	0.74	-0.7
4,926,313	+		Echvi_4111	0.74	+0.6
4,926,316	+		Echvi_4111	0.74	-0.4
4,926,316	+		Echvi_4111	0.74	-1.4
4,926,326	+		Echvi_4111	0.75	-0.2
4,926,326	+		Echvi_4111	0.75	-1.6
4,926,327	-		Echvi_4111	0.75	+0.1
4,926,446	-				+0.4
4,926,446	-				-0.7
4,926,446	-				-0.4
4,926,529	+				-0.1
4,926,530	-				+0.1
4,926,532	+				+0.5
4,926,532	+				+0.2
4,926,533	-				-0.5
4,926,567	+				+1.0
4,926,644	+		Echvi_4112	0.26	-0.4
4,926,693	+		Echvi_4112	0.38	+0.0
4,926,693	+		Echvi_4112	0.38	+0.2
4,926,705	-		Echvi_4112	0.41	-0.2
4,926,727	+		Echvi_4112	0.46	-1.6
4,926,727	+		Echvi_4112	0.46	-0.1
4,926,727	+		Echvi_4112	0.46	-0.7
4,926,753	+		Echvi_4112	0.52	-1.1
4,926,754	-		Echvi_4112	0.52	-0.6
4,926,754	-		Echvi_4112	0.52	+0.1
4,926,755	+		Echvi_4112	0.52	+0.3
4,926,755	+		Echvi_4112	0.52	+0.3
4,926,755	+		Echvi_4112	0.52	-0.3
4,926,756	-		Echvi_4112	0.52	-0.4
4,926,762	+		Echvi_4112	0.54	-0.1
4,926,763	-		Echvi_4112	0.54	-1.2
4,926,763	-		Echvi_4112	0.54	+0.7
4,926,789	+		Echvi_4112	0.60	+1.9
4,926,799	+		Echvi_4112	0.62	-1.7
4,926,800	-		Echvi_4112	0.63	-0.4
4,926,822	+		Echvi_4112	0.68	-1.1
4,926,823	-		Echvi_4112	0.68	-0.9
4,926,836	-		Echvi_4112	0.71	-0.4
4,926,924	+				-0.3
4,926,972	+				-0.0
4,926,976	+				+2.2
4,926,976	+				+0.2
4,926,979	+				-0.2
4,926,979	+				-1.2
4,926,979	+				+1.1
4,926,979	+				-0.5
4,926,980	-				-1.4
4,926,980	-				-0.7
4,926,980	-				-2.2
4,927,000	+				-0.7
4,927,001	-				+0.0
4,927,011	+				-0.4
4,927,011	+				-0.7
4,927,012	-				-0.4
4,927,181	+		Echvi_4113	0.45	-0.3
4,927,200	+		Echvi_4113	0.49	+1.2
4,927,276	+		Echvi_4113	0.65	-0.8
4,927,344	+		Echvi_4113	0.80	-0.3
4,927,345	-		Echvi_4113	0.80	-0.1
4,927,350	-		Echvi_4113	0.81	+0.1
4,927,361	+		Echvi_4113	0.83	-0.3
4,927,391	+		Echvi_4113	0.90	-0.1
4,927,391	+		Echvi_4113	0.90	+0.7
4,927,391	+		Echvi_4113	0.90	-0.2
4,927,392	-		Echvi_4113	0.90	-0.6
4,927,440	+				-0.6
4,927,470	+		Echvi_4114	0.12	-1.8
4,927,470	+		Echvi_4114	0.12	-0.2
4,927,487	+		Echvi_4114	0.19	-0.1
4,927,489	+		Echvi_4114	0.20	+1.0
4,927,520	+		Echvi_4114	0.33	+0.3
4,927,607	+		Echvi_4114	0.70	+0.3
4,927,607	+		Echvi_4114	0.70	+0.1
4,927,611	+		Echvi_4114	0.71	-1.2
4,927,653	+		Echvi_4114	0.89	+0.3
4,927,654	-		Echvi_4114	0.89	-0.4
4,927,658	+				-0.8
4,927,659	-				-1.6
4,927,659	-				-1.2
4,927,679	-				+1.5
4,927,706	+				+0.8
4,927,752	+		Echvi_4115	0.19	+0.7
4,927,753	-		Echvi_4115	0.20	+0.9
4,927,756	+		Echvi_4115	0.20	+0.2
4,927,756	+		Echvi_4115	0.20	+0.4
4,927,757	-		Echvi_4115	0.21	+0.4
4,927,757	-		Echvi_4115	0.21	+0.3
4,927,757	-		Echvi_4115	0.21	+0.3
4,927,760	+		Echvi_4115	0.22	+0.1
4,927,793	+		Echvi_4115	0.31	+0.5
4,927,794	-		Echvi_4115	0.32	-0.6
4,927,815	+		Echvi_4115	0.38	+0.3
4,927,816	-		Echvi_4115	0.38	-0.8
4,927,816	-		Echvi_4115	0.38	-1.2
4,927,816	-		Echvi_4115	0.38	+0.9
4,927,816	-		Echvi_4115	0.38	+0.3
4,927,816	-		Echvi_4115	0.38	-0.3