Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3868

Experiment: m.b. Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.001 mg/ml
4,623,284	+		Echvi_3866	0.78	+0.3
4,623,284	+		Echvi_3866	0.78	+0.7
4,623,359	+		Echvi_3866	0.84	+0.0
4,623,359	+		Echvi_3866	0.84	-0.1
4,623,360	-		Echvi_3866	0.84	+0.5
4,623,424	-		Echvi_3866	0.89	+0.1
4,623,446	+				+0.9
4,623,447	-				+0.4
4,623,453	-				+0.4
4,623,500	+				+0.7
4,623,500	+				+0.5
4,623,500	+				-0.4
4,623,500	+				+1.9
4,623,500	+				+1.9
4,623,501	-				+0.9
4,623,501	-				+0.5
4,623,501	-				-0.1
4,623,509	+				+1.6
4,623,556	-				-0.4
4,623,556	-				+1.3
4,623,580	-				-0.0
4,623,581	+				-0.4
4,623,586	+				-0.6
4,623,586	+				-0.7
4,623,586	+				+0.3
4,623,587	-				-0.6
4,623,606	-				-0.0
4,623,608	-				-1.5
4,623,655	+				-1.3
4,623,655	+				-0.2
4,623,656	-				-0.7
4,623,719	+		Echvi_3867	0.21	+0.8
4,623,719	+		Echvi_3867	0.21	+0.2
4,623,719	+		Echvi_3867	0.21	-0.4
4,623,720	-		Echvi_3867	0.21	+0.6
4,623,726	+		Echvi_3867	0.22	-0.6
4,623,727	-		Echvi_3867	0.22	+0.1
4,623,763	-		Echvi_3867	0.31	+2.3
4,623,796	+		Echvi_3867	0.38	-0.4
4,623,796	+		Echvi_3867	0.38	+0.3
4,623,796	+		Echvi_3867	0.38	-2.0
4,623,797	-		Echvi_3867	0.38	+0.4
4,623,946	+		Echvi_3867	0.72	+0.4
4,624,030	+				-0.7
4,624,030	+				-0.4
4,624,031	-				+0.1
4,624,069	-				-1.0
4,624,082	+				-0.0
4,624,082	+				-0.2
4,624,232	+				-0.0
4,624,232	+				+0.2
4,624,237	+				-0.1
4,624,288	+				+0.2
4,624,370	-				+0.2
4,624,426	+				-0.9
4,624,427	-				+0.2
4,624,457	+				-0.0
4,624,547	-		Echvi_3868	0.11	-1.5
4,624,547	-		Echvi_3868	0.11	-0.8
4,624,564	+		Echvi_3868	0.11	+1.1
4,624,565	-		Echvi_3868	0.11	+0.6
4,624,565	-		Echvi_3868	0.11	-0.9
4,624,565	-		Echvi_3868	0.11	-1.6
4,624,567	+		Echvi_3868	0.11	-0.2
4,624,568	-		Echvi_3868	0.11	-0.4
4,624,573	+		Echvi_3868	0.11	+0.3
4,624,573	+		Echvi_3868	0.11	-0.4
4,624,708	+		Echvi_3868	0.17	+0.6
4,624,709	-		Echvi_3868	0.17	-2.1
4,624,724	-		Echvi_3868	0.17	-0.4
4,624,725	+		Echvi_3868	0.17	-1.1
4,624,726	-		Echvi_3868	0.17	-1.3
4,624,858	+		Echvi_3868	0.22	-0.9
4,624,861	-		Echvi_3868	0.22	-0.2
4,624,861	-		Echvi_3868	0.22	-0.3
4,624,903	-		Echvi_3868	0.24	+1.0
4,624,922	+		Echvi_3868	0.25	-0.1
4,624,923	-		Echvi_3868	0.25	-0.0
4,624,923	-		Echvi_3868	0.25	-0.0
4,624,923	-		Echvi_3868	0.25	+0.2
4,624,923	-		Echvi_3868	0.25	-1.0
4,624,926	+		Echvi_3868	0.25	+2.4
4,624,946	+		Echvi_3868	0.26	-0.6
4,624,953	-		Echvi_3868	0.26	-0.4
4,624,995	-		Echvi_3868	0.27	-0.2
4,625,019	+		Echvi_3868	0.28	+1.0
4,625,051	+		Echvi_3868	0.30	-0.5
4,625,051	+		Echvi_3868	0.30	-0.9
4,625,051	+		Echvi_3868	0.30	+0.3
4,625,085	+		Echvi_3868	0.31	-0.8
4,625,086	-		Echvi_3868	0.31	-1.2
4,625,086	-		Echvi_3868	0.31	-0.7
4,625,086	-		Echvi_3868	0.31	-0.8
4,625,086	-		Echvi_3868	0.31	+0.7
4,625,123	+		Echvi_3868	0.32	-0.1
4,625,124	-		Echvi_3868	0.32	+1.3
4,625,124	-		Echvi_3868	0.32	-0.2
4,625,154	-		Echvi_3868	0.34	-1.0
4,625,168	+		Echvi_3868	0.34	+0.3
4,625,317	-		Echvi_3868	0.40	+0.9
4,625,416	+		Echvi_3868	0.43	-1.2
4,625,454	+		Echvi_3868	0.45	-0.1
4,625,504	-		Echvi_3868	0.47	-1.2
4,625,737	-		Echvi_3868	0.56	-1.1
4,625,751	-		Echvi_3868	0.56	-0.2
4,626,028	-		Echvi_3868	0.67	-0.0
4,626,034	+		Echvi_3868	0.67	+0.7
4,626,035	-		Echvi_3868	0.67	+0.6
4,626,035	-		Echvi_3868	0.67	-0.2
4,626,035	-		Echvi_3868	0.67	+0.6
4,626,039	+		Echvi_3868	0.67	+0.4
4,626,039	+		Echvi_3868	0.67	+0.2
4,626,039	+		Echvi_3868	0.67	+0.2
4,626,040	-		Echvi_3868	0.67	+0.1
4,626,040	-		Echvi_3868	0.67	+1.1
4,626,040	-		Echvi_3868	0.67	-0.0
4,626,040	-		Echvi_3868	0.67	+0.8
4,626,043	+		Echvi_3868	0.67	-1.1
4,626,044	-		Echvi_3868	0.67	-0.3
4,626,045	+		Echvi_3868	0.67	+0.4
4,626,046	-		Echvi_3868	0.67	-0.8
4,626,046	-		Echvi_3868	0.67	-0.0
4,626,053	-		Echvi_3868	0.68	+1.6
4,626,053	-		Echvi_3868	0.68	-1.5
4,626,123	-		Echvi_3868	0.70	-1.2
4,626,127	+		Echvi_3868	0.70	+0.6
4,626,128	-		Echvi_3868	0.70	-1.3
4,626,128	-		Echvi_3868	0.70	-0.1
4,626,128	-		Echvi_3868	0.70	-0.4
4,626,128	-		Echvi_3868	0.70	+0.2
4,626,128	-		Echvi_3868	0.70	+0.8
4,626,159	+		Echvi_3868	0.72	-0.9
4,626,168	+		Echvi_3868	0.72	-2.1
4,626,168	+		Echvi_3868	0.72	-0.3
4,626,169	-		Echvi_3868	0.72	+0.3
4,626,169	-		Echvi_3868	0.72	-2.0
4,626,184	-		Echvi_3868	0.73	-0.7
4,626,195	+		Echvi_3868	0.73	-0.2
4,626,195	+		Echvi_3868	0.73	+1.9
4,626,195	+		Echvi_3868	0.73	+1.1
4,626,196	-		Echvi_3868	0.73	-0.2
4,626,196	-		Echvi_3868	0.73	-0.6
4,626,196	-		Echvi_3868	0.73	-0.2
4,626,196	-		Echvi_3868	0.73	+0.2
4,626,196	-		Echvi_3868	0.73	+0.1
4,626,198	-		Echvi_3868	0.73	+0.3
4,626,198	-		Echvi_3868	0.73	+1.6
4,626,241	+		Echvi_3868	0.75	-0.0
4,626,242	-		Echvi_3868	0.75	+0.7
4,626,242	-		Echvi_3868	0.75	-0.8
4,626,247	+		Echvi_3868	0.75	-1.9
4,626,250	+		Echvi_3868	0.75	-0.4
4,626,313	+		Echvi_3868	0.77	-1.6
4,626,313	+		Echvi_3868	0.77	-0.0
4,626,313	+		Echvi_3868	0.77	-2.0
4,626,313	+		Echvi_3868	0.77	-0.0
4,626,313	+		Echvi_3868	0.77	+0.2
4,626,314	-		Echvi_3868	0.78	-0.4
4,626,314	-		Echvi_3868	0.78	-0.2
4,626,314	-		Echvi_3868	0.78	-0.7
4,626,557	+		Echvi_3868	0.87	-0.6
4,626,669	-				+0.2
4,626,669	-				+3.1
4,626,675	-				+0.3
4,626,675	-				-0.8
4,626,826	+				+0.6
4,626,826	+				+0.8
4,626,899	+				-0.4
4,626,900	-				-0.4
4,626,900	-				+0.3
4,626,904	+				-0.9
4,626,905	-				+0.3
4,626,907	+				+0.6
4,626,907	+				-0.3
4,626,907	+				-0.1
4,627,086	+				-0.4
4,627,086	+				-1.4
4,627,086	+				+1.0
4,627,087	-				+0.3
4,627,087	-				+0.1
4,627,215	+		Echvi_3869	0.24	-0.0
4,627,216	-		Echvi_3869	0.24	+0.5
4,627,223	+		Echvi_3869	0.25	-0.0
4,627,249	+		Echvi_3869	0.28	+0.5
4,627,250	-		Echvi_3869	0.28	-0.2
4,627,323	-		Echvi_3869	0.38	-0.9
4,627,359	+		Echvi_3869	0.43	+0.7
4,627,405	-		Echvi_3869	0.49	+3.1
4,627,431	+		Echvi_3869	0.52	-1.5
4,627,431	+		Echvi_3869	0.52	+1.4
4,627,432	-		Echvi_3869	0.52	+1.9
4,627,433	+		Echvi_3869	0.52	-0.7
4,627,434	-		Echvi_3869	0.52	+0.7
4,627,434	-		Echvi_3869	0.52	+0.8
4,627,435	-		Echvi_3869	0.53	-0.5
4,627,438	+		Echvi_3869	0.53	-0.5
4,627,439	-		Echvi_3869	0.53	+1.0
4,627,439	-		Echvi_3869	0.53	-2.8
4,627,487	-		Echvi_3869	0.59	-0.1
4,627,541	+		Echvi_3869	0.67	-0.4
4,627,585	-		Echvi_3869	0.72	+0.8
4,627,619	+		Echvi_3869	0.77	+1.2
4,627,619	+		Echvi_3869	0.77	+0.3
4,627,620	-		Echvi_3869	0.77	-0.3
4,627,621	+		Echvi_3869	0.77	+0.4
4,627,621	+		Echvi_3869	0.77	+0.2
4,627,622	-		Echvi_3869	0.77	+0.4
4,627,622	-		Echvi_3869	0.77	+0.7
4,627,623	+		Echvi_3869	0.77	-0.6
4,627,623	+		Echvi_3869	0.77	+0.1
4,627,623	+		Echvi_3869	0.77	-1.0
4,627,624	-		Echvi_3869	0.77	+0.1
4,627,624	-		Echvi_3869	0.77	-0.7
4,627,898	-		Echvi_3870	0.87	-1.4