Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3819

Experiment: m.b. Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.001 mg/ml
4,561,871	+		Echvi_3818	0.12	-1.4
4,562,070	-		Echvi_3818	0.37	-2.3
4,562,070	-				-0.0
4,562,070	-		Echvi_3818	0.37	-1.1
4,562,070	-		Echvi_3818	0.37	-1.2
4,562,070	-		Echvi_3818	0.37	-2.4
4,562,255	-		Echvi_3818	0.60	-1.0
4,562,583	+				-0.8
4,562,583	+				-0.4
4,562,583	+				-0.9
4,562,607	+				-0.5
4,562,637	+				-1.0
4,562,674	+				-0.6
4,562,674	+				-0.9
4,562,674	+				-0.0
4,562,693	-				-0.4
4,562,736	-				+0.2
4,562,813	-				+0.2
4,562,814	+				-0.4
4,562,814	+				-0.2
4,562,814	+				-1.3
4,562,815	-				-0.0
4,562,815	-				-0.3
4,562,846	-				+1.2
4,562,846	-				+0.1
4,562,868	-				+0.6
4,562,879	+				-0.1
4,562,988	+		Echvi_3819	0.20	-0.1
4,562,989	-		Echvi_3819	0.20	-0.4
4,562,990	+		Echvi_3819	0.21	-0.9
4,562,991	-		Echvi_3819	0.21	-1.6
4,563,179	+		Echvi_3819	0.46	-1.1
4,563,180	-		Echvi_3819	0.46	-1.9
4,563,381	+		Echvi_3819	0.74	-0.0
4,563,381	+		Echvi_3819	0.74	-0.0
4,563,459	+		Echvi_3819	0.84	+0.2
4,563,460	-		Echvi_3819	0.84	-0.7
4,563,546	-				-0.1
4,563,563	+				+0.5
4,563,580	-				-0.9
4,563,610	-				-0.2
4,563,637	+				-0.0
4,563,641	+				-2.4
4,563,642	-				-0.3
4,563,747	+		Echvi_3820	0.27	+0.8
4,563,782	-		Echvi_3820	0.33	-0.7
4,563,782	-		Echvi_3820	0.33	-2.0
4,563,787	+		Echvi_3820	0.34	-0.5
4,563,787	+		Echvi_3820	0.34	-0.2
4,563,793	+		Echvi_3820	0.35	-1.8
4,563,805	+		Echvi_3820	0.38	+0.6
4,563,877	+		Echvi_3820	0.52	-0.4
4,563,877	+		Echvi_3820	0.52	+0.1
4,563,878	-		Echvi_3820	0.52	+0.1
4,563,878	-		Echvi_3820	0.52	+0.4
4,563,881	+		Echvi_3820	0.53	+0.2
4,563,881	+		Echvi_3820	0.53	-0.2
4,563,881	+		Echvi_3820	0.53	-0.0
4,563,882	-		Echvi_3820	0.53	+0.3
4,563,882	-		Echvi_3820	0.53	-0.2
4,563,978	-		Echvi_3820	0.72	+0.1
4,564,084	+				-1.8
4,564,084	+				-0.1
4,564,085	-				+0.2
4,564,087	-				-0.1
4,564,123	+				+0.6
4,564,123	+				+0.2
4,564,124	-				-0.2
4,564,141	-				-0.4
4,564,142	+				-0.2
4,564,143	-				-1.2
4,564,244	-				-0.3
4,564,244	-				-0.6
4,564,249	+				-0.1
4,564,250	-				+0.1
4,564,250	-				-0.6
4,564,269	+				+0.5
4,564,332	-				+0.9
4,564,361	-				-0.5
4,564,371	+				-0.1
4,564,371	+				-0.9
4,564,381	-				+0.4
4,564,381	-				-1.6
4,564,381	-				-0.0
4,564,381	-				-0.1
4,564,385	+				-0.3
4,564,385	+				-2.2
4,564,386	-				-0.0
4,564,422	-				-1.0
4,564,431	-				-0.4
4,564,431	-				+0.4
4,564,437	-				+0.3
4,564,437	-				+1.8
4,564,437	-				+0.1
4,564,437	-				+0.3
4,564,437	-				+0.9