Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3743

Experiment: m.b. Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.001 mg/ml
4,457,696	-		Echvi_3742	0.34	-1.8
4,457,702	-		Echvi_3742	0.34	-1.1
4,457,718	-		Echvi_3742	0.35	-1.2
4,457,725	+		Echvi_3742	0.36	-0.9
4,457,725	+		Echvi_3742	0.36	+0.2
4,457,726	-		Echvi_3742	0.36	-0.9
4,457,726	-		Echvi_3742	0.36	-0.3
4,457,726	-		Echvi_3742	0.36	-1.4
4,457,825	+		Echvi_3742	0.43	-1.4
4,457,856	+		Echvi_3742	0.46	-0.8
4,457,856	+		Echvi_3742	0.46	-0.4
4,457,856	+		Echvi_3742	0.46	-3.0
4,457,863	+		Echvi_3742	0.46	+0.5
4,457,863	+		Echvi_3742	0.46	-1.0
4,457,864	-		Echvi_3742	0.46	-0.3
4,457,915	-		Echvi_3742	0.50	+0.3
4,457,954	+		Echvi_3742	0.53	-1.8
4,457,955	-		Echvi_3742	0.53	+1.3
4,458,046	+		Echvi_3742	0.60	-0.9
4,458,047	-		Echvi_3742	0.60	-1.6
4,458,116	-		Echvi_3742	0.65	-1.1
4,458,116	-		Echvi_3742	0.65	-0.1
4,458,116	-		Echvi_3742	0.65	+0.9
4,458,190	+		Echvi_3742	0.71	-3.3
4,458,190	+		Echvi_3742	0.71	-1.3
4,458,213	+		Echvi_3742	0.72	-2.5
4,458,214	-		Echvi_3742	0.72	-0.7
4,458,243	+		Echvi_3742	0.75	-1.1
4,458,267	-		Echvi_3742	0.76	+0.2
4,458,285	-		Echvi_3742	0.78	-2.1
4,458,316	-		Echvi_3742	0.80	-0.3
4,458,316	-		Echvi_3742	0.80	-0.1
4,458,451	+				-1.4
4,458,452	-				+0.6
4,458,458	+				-3.0
4,458,458	+				-1.9
4,458,458	+				-2.5
4,458,480	+				-2.2
4,458,514	+				-1.3
4,458,535	-				-1.5
4,458,555	+				-2.4
4,458,555	+				-1.4
4,458,555	+				-2.2
4,458,605	-				-0.4
4,458,605	-				+0.3
4,458,608	+				-1.6
4,458,609	-				-0.3
4,458,616	+				-0.5
4,458,617	-				-0.4
4,458,617	-				-0.7
4,458,620	+				-0.9
4,458,706	+				-2.4
4,458,707	-				+0.1
4,458,785	+		Echvi_3743	0.16	-0.8
4,458,785	+		Echvi_3743	0.16	-1.1
4,458,870	-		Echvi_3743	0.31	-0.7
4,458,996	+		Echvi_3743	0.53	-1.3
4,459,094	+		Echvi_3743	0.70	-1.2
4,459,098	+		Echvi_3743	0.71	-0.8
4,459,098	+		Echvi_3743	0.71	-0.3
4,459,098	+		Echvi_3743	0.71	-2.2
4,459,098	+		Echvi_3743	0.71	-1.0
4,459,098	+		Echvi_3743	0.71	-0.2
4,459,098	+		Echvi_3743	0.71	-0.1
4,459,098	+		Echvi_3743	0.71	-2.1
4,459,098	+		Echvi_3743	0.71	-0.1
4,459,098	+		Echvi_3743	0.71	-2.6
4,459,098	+		Echvi_3743	0.71	-3.1
4,459,099	-		Echvi_3743	0.71	-0.5
4,459,099	-		Echvi_3743	0.71	+0.1
4,459,099	-		Echvi_3743	0.71	-0.5
4,459,099	-		Echvi_3743	0.71	-0.5
4,459,099	-		Echvi_3743	0.71	-0.7
4,459,099	-		Echvi_3743	0.71	-0.2
4,459,244	+				-0.8
4,459,258	+				-1.5
4,459,259	-				-0.3
4,459,346	-				-0.0
4,459,365	+				+0.1
4,459,414	-				-0.5
4,459,416	-				-0.3
4,459,445	+				-1.6
4,459,446	-				-0.4
4,459,471	+				-0.3
4,459,484	-				-0.4
4,459,535	+				-0.1
4,459,548	+				-1.3
4,459,549	-				-0.1
4,459,549	-				-0.3
4,459,549	-				-0.1
4,459,557	+				-0.8
4,459,557	+				-0.2
4,459,558	-				-0.0
4,459,558	-				-0.1
4,459,578	+				-0.1
4,459,579	-				-0.2
4,459,579	-				-0.4
4,459,579	-				-0.4
4,459,680	-				-0.0
4,459,741	+				-0.8
4,459,742	-				-0.2
4,459,742	-				+0.1
4,459,749	+				+0.2
4,459,794	+				+0.9
4,459,795	-				-0.8
4,459,817	-				-0.5
4,459,817	-				+0.6
4,459,830	+				-0.1
4,459,830	+				+0.3
4,459,830	+				+0.2
4,459,831	-				+0.0
4,459,835	-				-0.1
4,459,905	-				+0.8
4,459,946	-				-0.0
4,459,965	+		Echvi_3744	0.15	-0.5
4,459,965	+		Echvi_3744	0.15	+0.2
4,459,992	-		Echvi_3744	0.25	-0.0
4,460,053	+		Echvi_3744	0.49	-0.1
4,460,053	+		Echvi_3744	0.49	-0.5
4,460,054	-		Echvi_3744	0.49	-0.8
4,460,141	-				-0.5
4,460,141	-		Echvi_3744	0.84	-0.1
4,460,145	-		Echvi_3744	0.85	-0.4
4,460,175	-				-0.9
4,460,175	-				+1.1
4,460,178	-				-0.2
4,460,178	-				+0.3
4,460,193	+				-1.1
4,460,226	-				+0.3
4,460,233	-				+0.6