Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3522

Experiment: m.b. Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.001 mg/ml
4,170,876	-				-0.1
4,170,885	+				-1.0
4,170,887	+				-0.6
4,170,887	+				-0.2
4,170,888	-				-0.3
4,171,043	-				+0.6
4,171,048	+				+0.2
4,171,051	+				+0.2
4,171,052	-				+0.1
4,171,075	-				+0.1
4,171,340	+				+0.6
4,171,389	+				-0.3
4,171,396	+				-0.1
4,171,396	+				+0.4
4,171,427	+				-0.2
4,171,434	+				-0.3
4,171,434	+				+0.2
4,171,434	+				+0.1
4,171,435	-				+0.5
4,171,438	+				-0.7
4,171,439	-				+0.8
4,171,459	+				+0.5
4,171,460	-				-0.8
4,171,493	+				-0.6
4,171,494	-				+0.3
4,171,494	-				-1.4
4,171,495	+				-0.3
4,171,495	+				-0.3
4,171,496	-				-1.1
4,171,498	-				-1.1
4,171,498	-				-0.5
4,171,515	+				-0.9
4,171,518	-				-0.5
4,171,524	-				-0.4
4,171,527	+				-0.5
4,171,528	-				+0.6
4,171,540	+				-0.2
4,171,602	+				-1.3
4,171,602	+				+0.2
4,171,603	-				+0.4
4,171,626	+				-1.6
4,171,665	-				+0.1
4,171,754	-				+1.0
4,171,792	-				+1.5
4,171,835	+				-0.1
4,171,841	-				-2.3
4,171,914	+				+0.5
4,171,914	+				-0.3
4,171,914	+				-1.5
4,171,914	+				-0.0
4,171,948	+		Echvi_3522	0.14	-0.5
4,172,007	+		Echvi_3522	0.22	-0.5
4,172,031	+		Echvi_3522	0.25	+0.5
4,172,031	+		Echvi_3522	0.25	+1.5
4,172,032	-		Echvi_3522	0.25	+1.1
4,172,032	-		Echvi_3522	0.25	-0.1
4,172,070	+		Echvi_3522	0.30	-1.2
4,172,070	+		Echvi_3522	0.30	+0.8
4,172,071	-		Echvi_3522	0.30	+0.6
4,172,071	-		Echvi_3522	0.30	-1.8
4,172,071	-		Echvi_3522	0.30	+0.2
4,172,184	-		Echvi_3522	0.45	-0.4
4,172,211	-		Echvi_3522	0.48	-0.5
4,172,211	-		Echvi_3522	0.48	-0.1
4,172,211	-		Echvi_3522	0.48	-0.0
4,172,214	+		Echvi_3522	0.48	+1.3
4,172,215	-		Echvi_3522	0.49	+1.9
4,172,261	+		Echvi_3522	0.55	-0.2
4,172,300	+		Echvi_3522	0.60	+0.9
4,172,308	+		Echvi_3522	0.61	-0.4
4,172,309	-		Echvi_3522	0.61	-1.1
4,172,361	-		Echvi_3522	0.67	+0.1
4,172,519	+		Echvi_3522	0.88	+1.1
4,172,521	+		Echvi_3522	0.88	+0.2
4,172,521	+		Echvi_3522	0.88	-0.3
4,172,536	-				+0.7
4,172,586	+				+0.1
4,172,587	-				-0.1
4,172,632	-				-0.6
4,172,632	-				+0.3
4,172,632	-				-0.1
4,172,812	+		Echvi_3523	0.16	+1.2
4,172,876	-		Echvi_3523	0.24	-0.8
4,172,878	-		Echvi_3523	0.25	-0.2
4,172,878	-		Echvi_3523	0.25	+1.1
4,172,939	+		Echvi_3523	0.32	-0.3
4,172,939	+		Echvi_3523	0.32	-0.3
4,172,939	+		Echvi_3523	0.32	-0.4
4,172,987	+		Echvi_3523	0.39	-0.8
4,172,987	+		Echvi_3523	0.39	-0.3
4,172,987	+		Echvi_3523	0.39	+0.0
4,172,988	-		Echvi_3523	0.39	-1.5
4,173,020	+		Echvi_3523	0.43	+0.4
4,173,020	+		Echvi_3523	0.43	-0.1
4,173,020	+		Echvi_3523	0.43	-1.1
4,173,020	+		Echvi_3523	0.43	-0.5
4,173,021	-		Echvi_3523	0.43	-0.8
4,173,021	-		Echvi_3523	0.43	-0.1
4,173,062	+		Echvi_3523	0.48	-0.7
4,173,063	-		Echvi_3523	0.48	-0.5
4,173,063	-		Echvi_3523	0.48	+0.5
4,173,087	+		Echvi_3523	0.51	+0.2
4,173,097	-		Echvi_3523	0.53	+1.1
4,173,097	-		Echvi_3523	0.53	+0.7
4,173,245	+		Echvi_3523	0.72	-0.3
4,173,245	+		Echvi_3523	0.72	-1.3
4,173,245	+		Echvi_3523	0.72	-1.3
4,173,281	-		Echvi_3523	0.76	+0.8
4,173,341	+		Echvi_3523	0.84	+0.6
4,173,384	+		Echvi_3523	0.90	-0.4
4,173,384	+		Echvi_3523	0.90	+0.7
4,173,385	-		Echvi_3523	0.90	+3.3
4,173,385	-		Echvi_3523	0.90	+0.2
4,173,389	+				+1.2
4,173,389	+				-1.0
4,173,389	+				-0.2
4,173,390	-				+0.0
4,173,390	-				-1.7
4,173,394	+				+0.4
4,173,395	-				-0.2
4,173,396	+				-1.3
4,173,396	+				-0.4
4,173,396	+				+0.7
4,173,397	-				-0.1
4,173,410	+				+0.5
4,173,458	+				-0.0
4,173,487	+				-1.4
4,173,488	-				+0.6
4,173,500	+				-0.1
4,173,508	+				-0.1
4,173,508	+				+0.4
4,173,533	+				+1.1
4,173,533	+				-1.0
4,173,533	+				-2.5
4,173,575	-				-0.7