Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3515

Experiment: m.b. Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.001 mg/ml
4,164,236	+				-0.0
4,164,237	-				-0.5
4,164,246	-				-0.3
4,164,246	-				+0.0
4,164,336	+		Echvi_3514	0.10	+2.5
4,164,336	+		Echvi_3514	0.10	+1.3
4,164,337	-		Echvi_3514	0.10	-2.2
4,164,337	-		Echvi_3514	0.10	+0.6
4,164,368	+		Echvi_3514	0.14	-1.0
4,164,369	-		Echvi_3514	0.14	+0.1
4,164,381	-		Echvi_3514	0.15	+1.5
4,164,403	+		Echvi_3514	0.18	-1.3
4,164,404	-		Echvi_3514	0.18	+0.8
4,164,404	-		Echvi_3514	0.18	-0.1
4,164,404	-		Echvi_3514	0.18	+0.1
4,164,499	-		Echvi_3514	0.29	+0.7
4,164,499	-		Echvi_3514	0.29	+0.2
4,164,510	-		Echvi_3514	0.30	-0.2
4,164,510	-		Echvi_3514	0.30	+2.5
4,164,510	-		Echvi_3514	0.30	+0.7
4,164,574	+		Echvi_3514	0.38	-0.1
4,164,681	+		Echvi_3514	0.50	-0.2
4,164,682	-		Echvi_3514	0.50	-0.0
4,164,684	+		Echvi_3514	0.50	+0.9
4,164,691	+		Echvi_3514	0.51	-0.6
4,164,705	+		Echvi_3514	0.53	-0.2
4,164,757	-		Echvi_3514	0.59	+0.5
4,164,785	+		Echvi_3514	0.62	-1.5
4,164,785	+		Echvi_3514	0.62	-0.5
4,164,786	-		Echvi_3514	0.62	+0.3
4,164,786	-		Echvi_3514	0.62	+0.5
4,164,786	-		Echvi_3514	0.62	-0.2
4,164,789	+		Echvi_3514	0.62	-0.4
4,164,789	+		Echvi_3514	0.62	+1.0
4,164,789	+		Echvi_3514	0.62	-0.4
4,164,790	-		Echvi_3514	0.63	-0.4
4,164,790	-		Echvi_3514	0.63	-0.9
4,164,790	-		Echvi_3514	0.63	+0.8
4,164,790	-		Echvi_3514	0.63	-0.9
4,164,790	-		Echvi_3514	0.63	-0.5
4,164,935	+		Echvi_3514	0.79	+0.5
4,164,935	+		Echvi_3514	0.79	+0.1
4,164,980	-		Echvi_3514	0.85	+0.7
4,164,980	-		Echvi_3514	0.85	-0.3
4,165,058	+				+0.7
4,165,124	-				-0.4
4,165,254	+		Echvi_3515	0.12	+1.3
4,165,254	+		Echvi_3515	0.12	+0.9
4,165,261	+		Echvi_3515	0.14	+0.2
4,165,262	-		Echvi_3515	0.14	-0.4
4,165,306	-		Echvi_3515	0.27	+0.0
4,165,406	+		Echvi_3515	0.56	+0.1
4,165,406	+		Echvi_3515	0.56	-0.0
4,165,407	-		Echvi_3515	0.56	-0.3
4,165,436	-		Echvi_3515	0.64	+2.1
4,165,664	+				+0.3
4,165,665	-				+0.6
4,165,665	-				-0.5
4,165,713	-		Echvi_3516	0.14	+2.0
4,165,740	+		Echvi_3516	0.16	-0.4
4,165,741	-		Echvi_3516	0.16	-0.3
4,165,741	-		Echvi_3516	0.16	-0.6
4,165,741	-		Echvi_3516	0.16	-0.9
4,165,813	-		Echvi_3516	0.23	+0.8
4,165,845	+		Echvi_3516	0.25	-0.8
4,166,002	+		Echvi_3516	0.39	-0.8
4,166,003	-		Echvi_3516	0.39	+0.3
4,166,003	-		Echvi_3516	0.39	+0.5
4,166,022	-		Echvi_3516	0.40	-0.4
4,166,135	+		Echvi_3516	0.50	-0.3
4,166,136	-		Echvi_3516	0.50	+0.7
4,166,136	-		Echvi_3516	0.50	-1.8
4,166,179	+		Echvi_3516	0.54	+1.2
4,166,180	-		Echvi_3516	0.54	-0.3
4,166,180	-		Echvi_3516	0.54	+0.3
4,166,224	-		Echvi_3516	0.57	+1.1
4,166,294	+		Echvi_3516	0.63	-1.5
4,166,305	-		Echvi_3516	0.64	+0.2
4,166,416	+		Echvi_3516	0.74	+0.4
4,166,507	+		Echvi_3516	0.82	+0.3