Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3274
Experiment: m.b. Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,879,142 | - | Echvi_3274 | 0.15 | -0.6 | |
3,879,142 | - | Echvi_3274 | 0.15 | -0.1 | |
3,879,142 | - | Echvi_3274 | 0.15 | -0.8 | |
3,879,213 | - | Echvi_3274 | 0.26 | -0.3 | |
3,879,213 | - | Echvi_3274 | 0.26 | -1.0 | |
3,879,291 | - | Echvi_3274 | 0.37 | -0.2 | |
3,879,363 | - | Echvi_3274 | 0.48 | -0.6 | |
3,879,374 | - | Echvi_3274 | 0.50 | -0.3 | |
3,879,392 | - | Echvi_3274 | 0.52 | -1.4 | |
3,879,414 | - | Echvi_3274 | 0.56 | -1.7 | |
3,879,419 | - | Echvi_3274 | 0.56 | -0.5 | |
3,879,447 | - | Echvi_3274 | 0.61 | -0.4 | |
3,879,447 | - | Echvi_3274 | 0.61 | -0.5 | |
3,879,524 | - | Echvi_3274 | 0.72 | -0.4 | |
3,879,526 | - | Echvi_3274 | 0.72 | +0.5 | |
3,879,526 | - | Echvi_3274 | 0.72 | +0.3 | |
3,879,526 | - | Echvi_3274 | 0.72 | -1.5 | |
3,879,629 | - | Echvi_3274 | 0.88 | +0.3 | |
3,879,690 | - | +0.5 |
Or see this region's nucleotide sequence