Experiment: m.b. Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3273 and Echvi_3274 overlap by 4 nucleotides Echvi_3274 and Echvi_3275 are separated by 1 nucleotides Echvi_3275 and Echvi_3276 are separated by 0 nucleotides
Echvi_3273: Echvi_3273 - riboflavin kinase/FMN adenylyltransferase, at 3,878,112 to 3,879,041
_3273
Echvi_3274: Echvi_3274 - tRNA pseudouridine 55 synthase, at 3,879,038 to 3,879,712
_3274
Echvi_3275: Echvi_3275 - Uncharacterized bacitracin resistance protein, at 3,879,714 to 3,880,511
_3275
Echvi_3276: Echvi_3276 - Protein of unknown function (DUF3098)., at 3,880,512 to 3,880,679
_3276
Position (kb)
3879
3880 Strain fitness (log2 ratio)
-1
0
1 at 3879.142 kb on - strand, within Echvi_3274 at 3879.142 kb on - strand, within Echvi_3274 at 3879.142 kb on - strand, within Echvi_3274 at 3879.213 kb on - strand, within Echvi_3274 at 3879.213 kb on - strand, within Echvi_3274 at 3879.291 kb on - strand, within Echvi_3274 at 3879.363 kb on - strand, within Echvi_3274 at 3879.374 kb on - strand, within Echvi_3274 at 3879.392 kb on - strand, within Echvi_3274 at 3879.414 kb on - strand, within Echvi_3274 at 3879.419 kb on - strand, within Echvi_3274 at 3879.447 kb on - strand, within Echvi_3274 at 3879.447 kb on - strand, within Echvi_3274 at 3879.524 kb on - strand, within Echvi_3274 at 3879.526 kb on - strand, within Echvi_3274 at 3879.526 kb on - strand, within Echvi_3274 at 3879.526 kb on - strand, within Echvi_3274 at 3879.629 kb on - strand, within Echvi_3274 at 3879.690 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.001 mg/ml remove 3,879,142 - Echvi_3274 0.15 -0.6 3,879,142 - Echvi_3274 0.15 -0.1 3,879,142 - Echvi_3274 0.15 -0.8 3,879,213 - Echvi_3274 0.26 -0.3 3,879,213 - Echvi_3274 0.26 -1.0 3,879,291 - Echvi_3274 0.37 -0.2 3,879,363 - Echvi_3274 0.48 -0.6 3,879,374 - Echvi_3274 0.50 -0.3 3,879,392 - Echvi_3274 0.52 -1.4 3,879,414 - Echvi_3274 0.56 -1.7 3,879,419 - Echvi_3274 0.56 -0.5 3,879,447 - Echvi_3274 0.61 -0.4 3,879,447 - Echvi_3274 0.61 -0.5 3,879,524 - Echvi_3274 0.72 -0.4 3,879,526 - Echvi_3274 0.72 +0.5 3,879,526 - Echvi_3274 0.72 +0.3 3,879,526 - Echvi_3274 0.72 -1.5 3,879,629 - Echvi_3274 0.88 +0.3 3,879,690 - +0.5
Or see this region's nucleotide sequence