Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3129

Experiment: m.b. Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.001 mg/ml
3,741,667	-		Echvi_3128	0.69	+0.3
3,741,734	-		Echvi_3128	0.73	-0.5
3,741,748	+		Echvi_3128	0.74	+0.2
3,741,769	+		Echvi_3128	0.75	-0.1
3,741,770	-		Echvi_3128	0.75	+0.5
3,741,770	-		Echvi_3128	0.75	+3.1
3,741,800	+		Echvi_3128	0.77	+1.3
3,741,800	+		Echvi_3128	0.77	+0.5
3,741,800	+		Echvi_3128	0.77	-1.9
3,741,801	-		Echvi_3128	0.77	+2.5
3,741,801	-		Echvi_3128	0.77	-0.3
3,741,801	-		Echvi_3128	0.77	-0.4
3,741,826	-		Echvi_3128	0.79	+0.3
3,741,864	-		Echvi_3128	0.81	-0.3
3,741,864	-		Echvi_3128	0.81	-0.0
3,741,887	-		Echvi_3128	0.83	-0.0
3,741,888	+		Echvi_3128	0.83	-0.5
3,741,889	-		Echvi_3128	0.83	-0.0
3,741,895	+		Echvi_3128	0.83	-0.3
3,741,899	+		Echvi_3128	0.83	-1.3
3,741,899	+		Echvi_3128	0.83	-1.3
3,741,900	-		Echvi_3128	0.83	-1.3
3,741,900	-		Echvi_3128	0.83	+0.1
3,741,900	-		Echvi_3128	0.83	+0.8
3,741,900	-		Echvi_3128	0.83	+0.7
3,741,992	+		Echvi_3128	0.89	-1.0
3,742,056	+				+1.1
3,742,057	-				+1.3
3,742,057	-				-0.7
3,742,074	+				-0.6
3,742,074	+				+0.6
3,742,124	+				+1.1
3,742,125	-				-0.1
3,742,125	-				+0.1
3,742,159	+				-0.9
3,742,160	-				-0.8
3,742,162	+				+0.1
3,742,163	-				-0.4
3,742,163	-				+0.1
3,742,206	-				+0.2
3,742,211	+				-1.3
3,742,290	-				-0.0
3,742,303	-				+0.2
3,742,307	+				+0.0
3,742,332	+				-0.2
3,742,362	+				-0.1
3,742,362	+				-0.4
3,742,382	-				+1.2
3,742,382	-				-0.4
3,742,383	+				-0.4
3,742,383	+				+0.7
3,742,423	+				-0.6
3,742,423	+				-0.0
3,742,423	+				-0.3
3,742,424	-				+1.5
3,742,424	-				+0.1
3,742,424	-				+0.3
3,742,424	-				+0.5
3,742,426	+				-0.1
3,742,517	-				-0.3
3,742,523	+				-0.4
3,742,523	+				+1.2
3,742,524	-				-0.0
3,742,526	-				-0.5
3,742,587	+				-0.8
3,742,699	+		Echvi_3129	0.33	-0.9
3,742,719	+		Echvi_3129	0.46	-0.3
3,742,773	+		Echvi_3129	0.81	-0.8
3,742,773	+		Echvi_3129	0.81	-0.7
3,742,773	+		Echvi_3129	0.81	-1.2
3,742,773	+		Echvi_3129	0.81	+0.4
3,742,773	+		Echvi_3129	0.81	-0.5
3,742,774	-		Echvi_3129	0.82	+0.1
3,742,774	-		Echvi_3129	0.82	-0.8
3,742,775	+		Echvi_3129	0.82	+0.1
3,742,861	+				-1.5
3,742,863	+				-0.5
3,742,863	+				+1.1
3,742,863	+				+0.6
3,742,863	+				+1.0
3,742,863	+				-0.6
3,742,863	+				+0.5
3,742,863	+				-0.8
3,742,864	-				+0.6
3,742,864	-				+0.9
3,742,864	-				-0.5
3,742,924	-				-0.3
3,742,929	+				-0.2
3,742,930	-				-0.0
3,742,930	-				-0.2
3,742,975	-				-0.5
3,743,104	+				-0.4
3,743,105	-				-0.3
3,743,111	-				-0.0
3,743,111	-				-2.0
3,743,146	+				+1.2
3,743,147	-				+1.0
3,743,155	-				-0.7
3,743,155	-				+0.4
3,743,157	+				+0.6
3,743,339	+				-0.5
3,743,340	-				+0.8
3,743,376	+				-1.2
3,743,377	-				-0.3
3,743,435	-				+0.5
3,743,453	-				+0.2
3,743,490	-				+0.1
3,743,527	+				-0.9
3,743,528	-				+0.2
3,743,534	+				+0.5
3,743,566	+				-0.0
3,743,586	-		Echvi_3131	0.10	-2.4
3,743,692	+		Echvi_3131	0.20	-1.9
3,743,735	-		Echvi_3131	0.24	-1.0
3,743,735	-		Echvi_3131	0.24	-1.2
3,743,765	+		Echvi_3131	0.27	-2.1