Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2277

Experiment: m.b. Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.001 mg/ml
2,696,541	+		Echvi_2275	0.88	+2.2
2,696,570	-		Echvi_2275	0.89	+1.9
2,696,630	+				+1.7
2,696,692	+				-1.2
2,696,693	-				-0.5
2,696,705	+				+0.5
2,696,764	-				+0.1
2,696,786	+				+0.7
2,696,787	-				-0.5
2,696,880	-				-0.6
2,696,880	-				+0.4
2,696,911	-				-0.6
2,696,911	-				-0.5
2,696,911	-				-0.1
2,696,933	-				-0.3
2,697,043	+		Echvi_2276	0.10	+0.7
2,697,043	+		Echvi_2276	0.10	-1.0
2,697,043	+		Echvi_2276	0.10	-0.1
2,697,044	-		Echvi_2276	0.10	-0.3
2,697,047	+		Echvi_2276	0.11	+1.1
2,697,048	-		Echvi_2276	0.11	-0.1
2,697,048	-		Echvi_2276	0.11	-0.6
2,697,106	-		Echvi_2276	0.22	-2.6
2,697,133	+		Echvi_2276	0.28	-0.1
2,697,259	+		Echvi_2276	0.52	-1.4
2,697,260	-		Echvi_2276	0.52	-0.2
2,697,290	+		Echvi_2276	0.58	-1.8
2,697,291	-		Echvi_2276	0.58	+0.7
2,697,305	+		Echvi_2276	0.61	-1.4
2,697,306	-		Echvi_2276	0.61	-2.8
2,697,314	+		Echvi_2276	0.63	-1.5
2,697,359	-		Echvi_2276	0.72	-1.6
2,697,392	+		Echvi_2276	0.78	-1.7
2,697,418	+		Echvi_2276	0.83	-0.6
2,697,461	+				-0.3
2,697,461	+				-1.6
2,697,462	-				+0.7
2,697,465	+				-2.2
2,697,468	-				-1.1
2,697,468	-				+0.1
2,697,488	+				+0.7
2,697,496	+				-1.0
2,697,496	+				+1.0
2,697,506	+				-2.2
2,697,541	-				+0.8
2,697,541	-				+0.2
2,697,569	+				+0.2
2,697,686	+		Echvi_2277	0.10	+0.5
2,697,687	-		Echvi_2277	0.10	-0.5
2,697,687	-		Echvi_2277	0.10	-0.9
2,697,751	+		Echvi_2277	0.15	-1.0
2,697,754	+		Echvi_2277	0.15	-1.3
2,697,755	-		Echvi_2277	0.15	+0.1
2,697,799	-		Echvi_2277	0.18	-1.5
2,697,871	-		Echvi_2277	0.22	+0.1
2,697,937	-		Echvi_2277	0.27	+0.3
2,697,937	-		Echvi_2277	0.27	-0.2
2,697,961	+		Echvi_2277	0.28	-1.1
2,697,962	-		Echvi_2277	0.28	+0.6
2,698,003	+		Echvi_2277	0.31	-0.4
2,698,148	+		Echvi_2277	0.40	-1.4
2,698,148	+		Echvi_2277	0.40	-0.5
2,698,149	-		Echvi_2277	0.40	-0.1
2,698,149	-		Echvi_2277	0.40	-0.9
2,698,149	-		Echvi_2277	0.40	-0.9
2,698,172	-		Echvi_2277	0.42	-1.6
2,698,177	-		Echvi_2277	0.42	+0.2
2,698,177	-		Echvi_2277	0.42	+0.2
2,698,194	+		Echvi_2277	0.43	-0.5
2,698,302	-		Echvi_2277	0.50	-0.7
2,698,377	-		Echvi_2277	0.55	+1.7
2,698,409	+		Echvi_2277	0.57	+1.3
2,698,410	-		Echvi_2277	0.57	-0.1
2,698,410	-		Echvi_2277	0.57	+0.5
2,698,410	-		Echvi_2277	0.57	-0.5
2,698,415	+		Echvi_2277	0.58	-0.2
2,698,416	-		Echvi_2277	0.58	+1.0
2,698,479	-		Echvi_2277	0.62	-0.6
2,698,538	-		Echvi_2277	0.66	-0.6
2,698,550	+		Echvi_2277	0.66	-1.2
2,698,551	-		Echvi_2277	0.67	-0.4
2,698,562	-		Echvi_2277	0.67	-0.8
2,698,562	-		Echvi_2277	0.67	-0.4
2,698,563	+		Echvi_2277	0.67	-2.2
2,698,564	-		Echvi_2277	0.67	+0.4
2,698,564	-		Echvi_2277	0.67	-0.8
2,698,564	-		Echvi_2277	0.67	+1.7
2,698,564	-		Echvi_2277	0.67	-1.3
2,698,702	-		Echvi_2277	0.76	-0.3
2,698,703	+		Echvi_2277	0.76	-0.2
2,698,703	+		Echvi_2277	0.76	-1.1
2,698,703	+		Echvi_2277	0.76	+0.7
2,698,703	+		Echvi_2277	0.76	-2.0
2,698,703	+		Echvi_2277	0.76	-1.6
2,698,703	+		Echvi_2277	0.76	-0.6
2,698,704	-		Echvi_2277	0.76	+0.1
2,698,704	-		Echvi_2277	0.76	-0.7
2,698,704	-		Echvi_2277	0.76	-0.4
2,698,704	-		Echvi_2277	0.76	+1.2
2,698,704	-		Echvi_2277	0.76	-0.0
2,698,704	-		Echvi_2277	0.76	-0.1
2,698,704	-		Echvi_2277	0.76	-1.7
2,698,708	-		Echvi_2277	0.77	+2.2
2,698,830	-		Echvi_2277	0.85	-1.1
2,698,830	-		Echvi_2277	0.85	-0.4
2,698,899	-		Echvi_2277	0.89	-0.7
2,698,996	+				-1.3
2,699,055	-				+0.7
2,699,199	+				-0.2
2,699,199	+				-1.6
2,699,242	-				-0.3
2,699,270	-				+0.6
2,699,329	-				-0.1
2,699,329	-				-0.2
2,699,329	-				-0.2
2,699,330	+				+2.0
2,699,330	+				-0.6
2,699,353	+		Echvi_2278	0.11	-2.0
2,699,353	+		Echvi_2278	0.11	+0.2
2,699,353	+		Echvi_2278	0.11	-0.8
2,699,353	+		Echvi_2278	0.11	+1.7
2,699,354	-		Echvi_2278	0.11	+0.0
2,699,354	-		Echvi_2278	0.11	+1.2
2,699,357	+		Echvi_2278	0.12	+1.4
2,699,357	+		Echvi_2278	0.12	-0.4
2,699,358	-		Echvi_2278	0.12	+0.1
2,699,384	+		Echvi_2278	0.14	+0.0
2,699,493	-		Echvi_2278	0.25	+0.5
2,699,516	+		Echvi_2278	0.27	-0.3
2,699,536	+		Echvi_2278	0.29	-0.6
2,699,580	+		Echvi_2278	0.33	+0.1
2,699,580	+		Echvi_2278	0.33	-2.2
2,699,596	+		Echvi_2278	0.35	-0.2
2,699,597	-		Echvi_2278	0.35	-0.3
2,699,652	+		Echvi_2278	0.40	+0.4
2,699,745	+		Echvi_2278	0.49	+0.2
2,699,746	-		Echvi_2278	0.49	+1.1
2,699,903	-		Echvi_2278	0.64	-1.2
2,699,908	+		Echvi_2278	0.64	+0.7
2,699,909	-		Echvi_2278	0.64	+0.4
2,699,909	-		Echvi_2278	0.64	+0.9
2,699,909	-		Echvi_2278	0.64	-0.2
2,699,909	-		Echvi_2278	0.64	+0.1
2,699,960	-		Echvi_2278	0.69	+0.4
2,700,016	-		Echvi_2278	0.75	-0.6