Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1800

Experiment: m.b. Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.001 mg/ml
2,115,874	+				+0.0
2,115,881	+				-0.2
2,115,882	-				-1.7
2,115,884	-				-0.4
2,116,101	+		Echvi_1799	0.29	-1.2
2,116,114	-		Echvi_1799	0.30	+0.6
2,116,118	+		Echvi_1799	0.31	-1.4
2,116,133	-		Echvi_1799	0.32	-0.1
2,116,179	-		Echvi_1799	0.37	-0.6
2,116,179	-		Echvi_1799	0.37	-0.2
2,116,179	-		Echvi_1799	0.37	-0.4
2,116,225	-		Echvi_1799	0.42	-0.2
2,116,231	+		Echvi_1799	0.42	+3.5
2,116,231	+		Echvi_1799	0.42	+1.0
2,116,232	-		Echvi_1799	0.42	-0.8
2,116,254	-		Echvi_1799	0.45	+0.6
2,116,271	-		Echvi_1799	0.46	+0.9
2,116,374	+		Echvi_1799	0.57	-0.9
2,116,404	+		Echvi_1799	0.60	+0.8
2,116,431	+		Echvi_1799	0.62	-0.7
2,116,474	-		Echvi_1799	0.67	-0.3
2,116,521	+		Echvi_1799	0.72	-0.6
2,116,527	+		Echvi_1799	0.72	-0.9
2,116,527	+		Echvi_1799	0.72	-1.3
2,116,527	+		Echvi_1799	0.72	+0.2
2,116,528	-		Echvi_1799	0.72	+1.5
2,116,528	-		Echvi_1799	0.72	+0.1
2,116,567	-		Echvi_1799	0.76	-0.6
2,116,619	-		Echvi_1799	0.82	+0.8
2,116,732	+				+0.4
2,116,733	-				-0.0
2,116,769	-				-0.3
2,116,774	-				+0.2
2,116,803	+				-1.3
2,116,803	+				-0.8
2,116,803	+				-0.7
2,116,804	-				-1.5
2,116,804	-				+3.4
2,116,804	-				+1.1
2,116,850	-				+0.5
2,116,862	+				-0.4
2,116,909	+				+0.2
2,116,910	-				+1.0
2,117,047	+		Echvi_1800	0.29	-1.7
2,117,048	-		Echvi_1800	0.29	-1.5
2,117,071	-		Echvi_1800	0.33	+0.6
2,117,137	+		Echvi_1800	0.43	+1.6
2,117,144	-		Echvi_1800	0.44	-0.9
2,117,196	-		Echvi_1800	0.53	-0.8
2,117,206	-		Echvi_1800	0.54	-0.3
2,117,245	+		Echvi_1800	0.60	-1.2
2,117,246	-		Echvi_1800	0.61	+0.5
2,117,290	+		Echvi_1800	0.67	+1.2
2,117,291	-		Echvi_1800	0.68	-1.2
2,117,323	+				+1.8
2,117,418	+		Echvi_1800	0.88	+0.8
2,117,477	-				-0.3
2,117,477	-				-0.6
2,117,478	+				+1.2
2,117,479	-				+0.3
2,117,479	-				+0.8
2,117,479	-				-0.7
2,117,570	+				-0.2
2,117,571	-				+0.0
2,117,616	+				-0.4
2,117,617	-				+0.1
2,117,617	-				+0.3
2,117,617	-				-0.1
2,117,647	+				-0.4
2,117,693	+		Echvi_1801	0.11	-3.1
2,117,693	+		Echvi_1801	0.11	+0.1
2,117,770	-		Echvi_1801	0.17	+1.6
2,117,785	-		Echvi_1801	0.18	-0.0
2,117,785	-		Echvi_1801	0.18	-0.5
2,117,813	+		Echvi_1801	0.20	-0.2
2,117,813	+		Echvi_1801	0.20	-0.3
2,117,822	+		Echvi_1801	0.21	-0.2
2,117,822	+		Echvi_1801	0.21	-0.2
2,117,869	+		Echvi_1801	0.25	+0.4
2,117,880	+		Echvi_1801	0.25	-0.2
2,117,881	-		Echvi_1801	0.25	+0.6
2,117,886	+		Echvi_1801	0.26	-1.4
2,117,886	+		Echvi_1801	0.26	-0.7
2,117,927	-		Echvi_1801	0.29	-0.4
2,117,936	+		Echvi_1801	0.30	-0.2
2,117,937	-		Echvi_1801	0.30	-0.0
2,117,991	-		Echvi_1801	0.34	+0.6
2,117,991	-		Echvi_1801	0.34	-0.4
2,117,991	-		Echvi_1801	0.34	+0.6
2,117,991	-		Echvi_1801	0.34	+1.1
2,118,014	+		Echvi_1801	0.36	+1.0
2,118,014	+		Echvi_1801	0.36	-0.7
2,118,015	-		Echvi_1801	0.36	+0.2
2,118,015	-		Echvi_1801	0.36	-0.8
2,118,024	+		Echvi_1801	0.37	+0.5
2,118,024	+		Echvi_1801	0.37	+0.4
2,118,025	-		Echvi_1801	0.37	+0.2
2,118,109	-		Echvi_1801	0.43	+0.1
2,118,122	-		Echvi_1801	0.44	+0.8
2,118,303	+		Echvi_1801	0.58	+0.9
2,118,303	+		Echvi_1801	0.58	-0.7
2,118,303	+		Echvi_1801	0.58	-0.1
2,118,303	+		Echvi_1801	0.58	-0.4
2,118,304	-		Echvi_1801	0.58	+1.2
2,118,304	-		Echvi_1801	0.58	+1.1
2,118,309	-		Echvi_1801	0.59	-0.5
2,118,410	+		Echvi_1801	0.66	+1.1
2,118,480	+		Echvi_1801	0.72	+0.4
2,118,480	+		Echvi_1801	0.72	+0.4
2,118,481	-		Echvi_1801	0.72	-0.1
2,118,481	-		Echvi_1801	0.72	-1.1
2,118,488	+		Echvi_1801	0.72	-0.7
2,118,488	+		Echvi_1801	0.72	+0.1
2,118,491	+		Echvi_1801	0.73	-0.3
2,118,491	+		Echvi_1801	0.73	+0.2
2,118,492	-		Echvi_1801	0.73	+0.5
2,118,492	-		Echvi_1801	0.73	+1.3
2,118,492	-		Echvi_1801	0.73	-0.7