Experiment: m.b. Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0742 and Echvi_0743 are separated by 57 nucleotides Echvi_0743 and Echvi_0744 are separated by 226 nucleotides Echvi_0744 and Echvi_0745 are separated by 360 nucleotides
Echvi_0742: Echvi_0742 - hypothetical protein, at 831,018 to 831,356
_0742
Echvi_0743: Echvi_0743 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 831,414 to 831,995
_0743
Echvi_0744: Echvi_0744 - glycine dehydrogenase (decarboxylating), at 832,222 to 835,122
_0744
Echvi_0745: Echvi_0745 - Predicted aminopeptidases, at 835,483 to 836,979
_0745
Position (kb) 832
833
834
835
836 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 831.226 kb on + strand, within Echvi_0742 at 831.227 kb on - strand, within Echvi_0742 at 831.228 kb on + strand, within Echvi_0742 at 831.229 kb on - strand, within Echvi_0742 at 831.229 kb on - strand, within Echvi_0742 at 831.248 kb on - strand, within Echvi_0742 at 831.248 kb on - strand, within Echvi_0742 at 831.268 kb on + strand, within Echvi_0742 at 831.273 kb on + strand, within Echvi_0742 at 831.339 kb on + strand at 831.340 kb on - strand at 831.408 kb on + strand at 831.409 kb on - strand at 831.410 kb on + strand at 831.410 kb on + strand at 831.411 kb on - strand at 831.411 kb on - strand at 831.472 kb on + strand at 831.473 kb on - strand, within Echvi_0743 at 831.519 kb on + strand, within Echvi_0743 at 831.520 kb on - strand, within Echvi_0743 at 831.535 kb on + strand, within Echvi_0743 at 831.536 kb on - strand, within Echvi_0743 at 831.569 kb on + strand, within Echvi_0743 at 831.640 kb on + strand, within Echvi_0743 at 831.665 kb on + strand, within Echvi_0743 at 831.666 kb on - strand, within Echvi_0743 at 831.712 kb on + strand, within Echvi_0743 at 831.712 kb on + strand, within Echvi_0743 at 831.713 kb on - strand, within Echvi_0743 at 831.713 kb on - strand, within Echvi_0743 at 831.744 kb on + strand, within Echvi_0743 at 831.745 kb on - strand, within Echvi_0743 at 831.811 kb on + strand, within Echvi_0743 at 831.812 kb on - strand, within Echvi_0743 at 831.812 kb on - strand, within Echvi_0743 at 831.814 kb on + strand, within Echvi_0743 at 831.834 kb on + strand, within Echvi_0743 at 831.879 kb on + strand, within Echvi_0743 at 831.880 kb on - strand, within Echvi_0743 at 831.912 kb on - strand, within Echvi_0743 at 831.955 kb on + strand at 831.956 kb on - strand at 831.956 kb on - strand at 832.004 kb on + strand at 832.043 kb on - strand at 832.058 kb on + strand at 832.058 kb on + strand at 832.058 kb on + strand at 832.058 kb on + strand at 832.058 kb on + strand at 832.058 kb on + strand at 832.059 kb on - strand at 832.059 kb on - strand at 832.059 kb on - strand at 832.060 kb on + strand at 832.061 kb on - strand at 832.061 kb on - strand at 832.092 kb on - strand at 832.168 kb on + strand at 832.220 kb on + strand at 832.221 kb on - strand at 832.223 kb on + strand at 832.223 kb on + strand at 832.223 kb on + strand at 832.224 kb on - strand at 832.247 kb on + strand at 832.293 kb on - strand at 832.343 kb on + strand at 832.709 kb on + strand, within Echvi_0744 at 832.758 kb on + strand, within Echvi_0744 at 832.758 kb on + strand, within Echvi_0744 at 833.051 kb on - strand, within Echvi_0744 at 833.064 kb on + strand, within Echvi_0744 at 833.064 kb on + strand, within Echvi_0744 at 833.081 kb on + strand, within Echvi_0744 at 833.081 kb on + strand, within Echvi_0744 at 833.081 kb on + strand, within Echvi_0744 at 833.081 kb on + strand, within Echvi_0744 at 833.082 kb on - strand, within Echvi_0744 at 833.152 kb on - strand, within Echvi_0744 at 833.230 kb on - strand, within Echvi_0744 at 833.480 kb on + strand, within Echvi_0744 at 833.480 kb on + strand, within Echvi_0744 at 833.481 kb on - strand, within Echvi_0744 at 833.481 kb on - strand, within Echvi_0744 at 833.481 kb on - strand, within Echvi_0744 at 833.767 kb on + strand, within Echvi_0744 at 833.858 kb on + strand, within Echvi_0744 at 833.858 kb on + strand, within Echvi_0744 at 833.864 kb on + strand, within Echvi_0744 at 833.963 kb on + strand, within Echvi_0744 at 834.018 kb on + strand, within Echvi_0744 at 834.072 kb on - strand, within Echvi_0744 at 834.081 kb on - strand, within Echvi_0744 at 834.106 kb on + strand, within Echvi_0744 at 834.106 kb on + strand, within Echvi_0744 at 834.107 kb on - strand, within Echvi_0744 at 834.201 kb on + strand, within Echvi_0744 at 834.245 kb on + strand, within Echvi_0744 at 834.246 kb on - strand, within Echvi_0744 at 834.246 kb on - strand, within Echvi_0744 at 834.405 kb on + strand, within Echvi_0744 at 834.405 kb on + strand, within Echvi_0744 at 834.405 kb on + strand, within Echvi_0744 at 834.435 kb on + strand, within Echvi_0744 at 834.435 kb on + strand, within Echvi_0744 at 834.436 kb on - strand, within Echvi_0744 at 834.679 kb on - strand, within Echvi_0744 at 834.789 kb on - strand, within Echvi_0744 at 834.795 kb on + strand, within Echvi_0744 at 834.807 kb on - strand, within Echvi_0744 at 834.807 kb on - strand, within Echvi_0744 at 834.840 kb on + strand at 834.840 kb on + strand at 834.841 kb on - strand at 834.863 kb on + strand at 834.880 kb on - strand at 834.880 kb on - strand at 835.139 kb on - strand at 835.142 kb on - strand at 835.143 kb on + strand at 835.143 kb on + strand at 835.144 kb on - strand at 835.144 kb on - strand at 835.154 kb on + strand at 835.155 kb on - strand at 835.155 kb on - strand at 835.293 kb on - strand at 835.294 kb on + strand at 835.295 kb on - strand at 835.295 kb on - strand at 835.378 kb on + strand at 835.429 kb on - strand at 835.439 kb on - strand at 835.439 kb on - strand at 835.442 kb on + strand at 835.443 kb on - strand at 835.443 kb on - strand at 835.448 kb on + strand at 835.448 kb on + strand at 835.465 kb on + strand at 835.466 kb on - strand at 835.476 kb on + strand at 835.476 kb on + strand at 835.476 kb on + strand at 835.477 kb on - strand at 835.478 kb on + strand at 835.495 kb on + strand at 835.496 kb on - strand at 835.521 kb on - strand at 835.607 kb on - strand at 835.607 kb on - strand at 835.616 kb on - strand at 835.725 kb on - strand, within Echvi_0745 at 835.735 kb on + strand, within Echvi_0745 at 835.735 kb on + strand, within Echvi_0745 at 835.736 kb on - strand, within Echvi_0745 at 835.855 kb on + strand, within Echvi_0745 at 836.057 kb on - strand, within Echvi_0745
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.001 mg/ml remove 831,226 + Echvi_0742 0.61 +0.6 831,227 - Echvi_0742 0.62 +0.1 831,228 + Echvi_0742 0.62 +0.3 831,229 - Echvi_0742 0.62 +0.6 831,229 - Echvi_0742 0.62 -0.5 831,248 - Echvi_0742 0.68 +0.1 831,248 - Echvi_0742 0.68 +0.5 831,268 + Echvi_0742 0.74 -0.2 831,273 + Echvi_0742 0.75 +0.4 831,339 + -0.8 831,340 - +1.2 831,408 + -0.0 831,409 - -0.5 831,410 + +0.0 831,410 + -0.9 831,411 - -0.2 831,411 - +0.6 831,472 + -0.3 831,473 - Echvi_0743 0.10 -0.1 831,519 + Echvi_0743 0.18 -0.3 831,520 - Echvi_0743 0.18 -0.1 831,535 + Echvi_0743 0.21 -3.1 831,536 - Echvi_0743 0.21 -0.2 831,569 + Echvi_0743 0.27 +0.2 831,640 + Echvi_0743 0.39 -0.0 831,665 + Echvi_0743 0.43 +0.2 831,666 - Echvi_0743 0.43 +1.1 831,712 + Echvi_0743 0.51 -0.7 831,712 + Echvi_0743 0.51 -0.3 831,713 - Echvi_0743 0.51 -0.6 831,713 - Echvi_0743 0.51 +0.1 831,744 + Echvi_0743 0.57 +0.6 831,745 - Echvi_0743 0.57 +0.8 831,811 + Echvi_0743 0.68 +0.6 831,812 - Echvi_0743 0.68 -0.3 831,812 - Echvi_0743 0.68 -1.5 831,814 + Echvi_0743 0.69 -0.0 831,834 + Echvi_0743 0.72 +1.5 831,879 + Echvi_0743 0.80 -0.0 831,880 - Echvi_0743 0.80 -1.3 831,912 - Echvi_0743 0.86 -0.3 831,955 + -0.4 831,956 - -0.3 831,956 - -0.1 832,004 + -0.1 832,043 - -0.6 832,058 + -0.0 832,058 + +0.4 832,058 + -0.2 832,058 + -0.4 832,058 + -1.2 832,058 + +1.3 832,059 - +1.0 832,059 - +0.7 832,059 - -0.5 832,060 + +0.9 832,061 - -0.7 832,061 - +0.9 832,092 - +0.3 832,168 + +0.6 832,220 + -1.7 832,221 - -0.6 832,223 + +1.2 832,223 + +0.0 832,223 + +0.1 832,224 - -0.1 832,247 + +2.3 832,293 - +0.9 832,343 + -1.4 832,709 + Echvi_0744 0.17 +1.3 832,758 + Echvi_0744 0.18 +0.1 832,758 + Echvi_0744 0.18 -2.1 833,051 - Echvi_0744 0.29 -0.3 833,064 + Echvi_0744 0.29 -0.3 833,064 + Echvi_0744 0.29 -1.2 833,081 + Echvi_0744 0.30 +1.1 833,081 + Echvi_0744 0.30 +0.1 833,081 + Echvi_0744 0.30 -0.4 833,081 + Echvi_0744 0.30 -1.9 833,082 - Echvi_0744 0.30 -0.1 833,152 - Echvi_0744 0.32 +0.6 833,230 - Echvi_0744 0.35 +0.3 833,480 + Echvi_0744 0.43 +0.0 833,480 + Echvi_0744 0.43 +0.9 833,481 - Echvi_0744 0.43 +0.6 833,481 - Echvi_0744 0.43 -0.9 833,481 - Echvi_0744 0.43 -0.2 833,767 + Echvi_0744 0.53 +1.2 833,858 + Echvi_0744 0.56 -0.2 833,858 + Echvi_0744 0.56 -1.7 833,864 + Echvi_0744 0.57 +0.5 833,963 + Echvi_0744 0.60 -1.1 834,018 + Echvi_0744 0.62 -1.0 834,072 - Echvi_0744 0.64 +1.9 834,081 - Echvi_0744 0.64 -1.3 834,106 + Echvi_0744 0.65 +1.9 834,106 + Echvi_0744 0.65 +0.3 834,107 - Echvi_0744 0.65 -0.2 834,201 + Echvi_0744 0.68 -0.4 834,245 + Echvi_0744 0.70 +0.5 834,246 - Echvi_0744 0.70 -2.1 834,246 - Echvi_0744 0.70 -0.7 834,405 + Echvi_0744 0.75 +0.3 834,405 + Echvi_0744 0.75 -2.1 834,405 + Echvi_0744 0.75 +1.2 834,435 + Echvi_0744 0.76 -0.7 834,435 + Echvi_0744 0.76 -0.5 834,436 - Echvi_0744 0.76 -1.9 834,679 - Echvi_0744 0.85 -0.9 834,789 - Echvi_0744 0.88 -0.7 834,795 + Echvi_0744 0.89 -1.0 834,807 - Echvi_0744 0.89 -0.4 834,807 - Echvi_0744 0.89 +0.2 834,840 + +0.9 834,840 + -1.5 834,841 - +1.4 834,863 + -0.8 834,880 - +1.1 834,880 - +1.0 835,139 - -0.1 835,142 - +0.9 835,143 + +0.3 835,143 + +0.5 835,144 - -1.5 835,144 - -1.4 835,154 + -1.1 835,155 - +1.5 835,155 - -0.8 835,293 - +1.0 835,294 + -0.1 835,295 - -0.4 835,295 - -0.7 835,378 + +0.5 835,429 - -0.4 835,439 - -0.6 835,439 - +0.7 835,442 + +0.8 835,443 - -0.1 835,443 - -0.0 835,448 + +0.9 835,448 + -0.0 835,465 + -0.6 835,466 - -0.3 835,476 + +0.9 835,476 + -2.3 835,476 + +1.0 835,477 - -0.2 835,478 + +0.7 835,495 + -0.4 835,496 - -0.0 835,521 - +1.1 835,607 - +0.4 835,607 - -0.0 835,616 - +0.1 835,725 - Echvi_0745 0.16 +0.8 835,735 + Echvi_0745 0.17 -1.2 835,735 + Echvi_0745 0.17 -0.8 835,736 - Echvi_0745 0.17 -0.1 835,855 + Echvi_0745 0.25 +0.2 836,057 - Echvi_0745 0.38 +0.4
Or see this region's nucleotide sequence