Experiment: m.b. Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0660 and Echvi_0661 are separated by 64 nucleotides Echvi_0661 and Echvi_0662 are separated by 102 nucleotides Echvi_0662 and Echvi_0663 are separated by 143 nucleotides Echvi_0663 and Echvi_0664 are separated by 104 nucleotides
Echvi_0660: Echvi_0660 - Uncharacterized conserved protein, at 744,012 to 744,458
_0660
Echvi_0661: Echvi_0661 - pyridoxine 5'-phosphate synthase, at 744,523 to 745,248
_0661
Echvi_0662: Echvi_0662 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 745,351 to 746,112
_0662
Echvi_0663: Echvi_0663 - Predicted methyltransferases, at 746,256 to 746,969
_0663
Echvi_0664: Echvi_0664 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 747,074 to 747,772
_0664
Position (kb)
745
746
747 Strain fitness (log2 ratio)
-2
-1
0
1 at 744.359 kb on + strand, within Echvi_0660 at 744.359 kb on + strand, within Echvi_0660 at 744.360 kb on - strand, within Echvi_0660 at 744.365 kb on + strand, within Echvi_0660 at 744.439 kb on - strand at 744.511 kb on + strand at 744.511 kb on + strand at 744.511 kb on + strand at 744.512 kb on - strand at 745.247 kb on - strand at 745.254 kb on - strand at 745.306 kb on + strand at 745.359 kb on - strand at 745.366 kb on - strand at 745.462 kb on + strand, within Echvi_0662 at 745.525 kb on + strand, within Echvi_0662 at 745.557 kb on + strand, within Echvi_0662 at 745.585 kb on + strand, within Echvi_0662 at 745.585 kb on + strand, within Echvi_0662 at 745.588 kb on - strand, within Echvi_0662 at 745.634 kb on + strand, within Echvi_0662 at 745.634 kb on + strand, within Echvi_0662 at 745.635 kb on - strand, within Echvi_0662 at 745.930 kb on + strand, within Echvi_0662 at 745.930 kb on + strand, within Echvi_0662 at 745.973 kb on - strand, within Echvi_0662 at 745.973 kb on - strand, within Echvi_0662 at 745.973 kb on - strand, within Echvi_0662 at 745.974 kb on + strand, within Echvi_0662 at 745.975 kb on - strand, within Echvi_0662 at 746.020 kb on + strand, within Echvi_0662 at 746.208 kb on - strand at 746.274 kb on + strand at 746.274 kb on + strand at 746.361 kb on + strand, within Echvi_0663 at 746.362 kb on - strand, within Echvi_0663 at 746.397 kb on - strand, within Echvi_0663 at 746.454 kb on - strand, within Echvi_0663 at 746.723 kb on + strand, within Echvi_0663 at 746.723 kb on + strand, within Echvi_0663 at 746.723 kb on + strand, within Echvi_0663 at 746.991 kb on - strand at 747.003 kb on + strand at 747.003 kb on + strand at 747.004 kb on - strand at 747.007 kb on + strand at 747.007 kb on + strand at 747.008 kb on - strand at 747.008 kb on - strand at 747.051 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.001 mg/ml remove 744,359 + Echvi_0660 0.78 +0.4 744,359 + Echvi_0660 0.78 -1.2 744,360 - Echvi_0660 0.78 -0.5 744,365 + Echvi_0660 0.79 -0.2 744,439 - +0.3 744,511 + -0.2 744,511 + -0.2 744,511 + +0.0 744,512 - -2.7 745,247 - -1.1 745,254 - -0.0 745,306 + +1.5 745,359 - -0.7 745,366 - -0.6 745,462 + Echvi_0662 0.15 -0.9 745,525 + Echvi_0662 0.23 -1.4 745,557 + Echvi_0662 0.27 +1.2 745,585 + Echvi_0662 0.31 -0.7 745,585 + Echvi_0662 0.31 -1.3 745,588 - Echvi_0662 0.31 +0.9 745,634 + Echvi_0662 0.37 +0.3 745,634 + Echvi_0662 0.37 -2.7 745,635 - Echvi_0662 0.37 -0.9 745,930 + Echvi_0662 0.76 -1.6 745,930 + Echvi_0662 0.76 -0.7 745,973 - Echvi_0662 0.82 -1.5 745,973 - Echvi_0662 0.82 -0.6 745,973 - Echvi_0662 0.82 +0.6 745,974 + Echvi_0662 0.82 -0.6 745,975 - Echvi_0662 0.82 -0.1 746,020 + Echvi_0662 0.88 +1.3 746,208 - +0.2 746,274 + +0.4 746,274 + -0.9 746,361 + Echvi_0663 0.15 -0.8 746,362 - Echvi_0663 0.15 +1.1 746,397 - Echvi_0663 0.20 -0.1 746,454 - Echvi_0663 0.28 +0.6 746,723 + Echvi_0663 0.65 -0.6 746,723 + Echvi_0663 0.65 +0.4 746,723 + Echvi_0663 0.65 +0.6 746,991 - +1.6 747,003 + -1.7 747,003 + +0.9 747,004 - -0.3 747,007 + -0.3 747,007 + -1.3 747,008 - +0.6 747,008 - +0.1 747,051 + -1.4
Or see this region's nucleotide sequence