Experiment: m.b. Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0367 and Echvi_0368 are separated by 61 nucleotides Echvi_0368 and Echvi_0369 are separated by 79 nucleotides
Echvi_0367: Echvi_0367 - hypothetical protein, at 395,055 to 395,969
_0367
Echvi_0368: Echvi_0368 - hypothetical protein, at 396,031 to 396,132
_0368
Echvi_0369: Echvi_0369 - ATPases with chaperone activity, ATP-binding subunit, at 396,212 to 398,740
_0369
Position (kb) 396
397 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 395.065 kb on + strand at 395.069 kb on - strand at 395.108 kb on + strand at 395.173 kb on + strand, within Echvi_0367 at 395.174 kb on - strand, within Echvi_0367 at 395.242 kb on + strand, within Echvi_0367 at 395.267 kb on + strand, within Echvi_0367 at 395.292 kb on - strand, within Echvi_0367 at 395.328 kb on + strand, within Echvi_0367 at 395.338 kb on - strand, within Echvi_0367 at 395.359 kb on - strand, within Echvi_0367 at 395.381 kb on - strand, within Echvi_0367 at 395.388 kb on - strand, within Echvi_0367 at 395.406 kb on - strand, within Echvi_0367 at 395.414 kb on + strand, within Echvi_0367 at 395.415 kb on - strand, within Echvi_0367 at 395.416 kb on + strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.417 kb on - strand, within Echvi_0367 at 395.502 kb on + strand at 395.563 kb on + strand, within Echvi_0367 at 395.576 kb on + strand, within Echvi_0367 at 395.596 kb on + strand, within Echvi_0367 at 395.596 kb on + strand, within Echvi_0367 at 395.596 kb on + strand, within Echvi_0367 at 395.596 kb on + strand, within Echvi_0367 at 395.596 kb on + strand, within Echvi_0367 at 395.597 kb on - strand, within Echvi_0367 at 395.597 kb on - strand, within Echvi_0367 at 395.602 kb on + strand, within Echvi_0367 at 395.640 kb on - strand, within Echvi_0367 at 395.659 kb on + strand, within Echvi_0367 at 395.659 kb on + strand, within Echvi_0367 at 395.660 kb on - strand, within Echvi_0367 at 395.660 kb on - strand, within Echvi_0367 at 395.712 kb on - strand, within Echvi_0367 at 395.713 kb on + strand, within Echvi_0367 at 395.713 kb on + strand, within Echvi_0367 at 395.713 kb on + strand, within Echvi_0367 at 395.714 kb on - strand, within Echvi_0367 at 395.750 kb on - strand, within Echvi_0367 at 395.759 kb on + strand, within Echvi_0367 at 395.759 kb on + strand, within Echvi_0367 at 395.760 kb on - strand, within Echvi_0367 at 395.891 kb on - strand at 395.891 kb on - strand at 395.892 kb on + strand at 395.893 kb on - strand at 395.912 kb on - strand at 395.936 kb on + strand at 395.948 kb on + strand at 396.015 kb on + strand at 396.027 kb on + strand at 396.032 kb on + strand at 396.032 kb on + strand at 396.032 kb on + strand at 396.053 kb on + strand, within Echvi_0368 at 396.053 kb on + strand, within Echvi_0368 at 396.053 kb on + strand, within Echvi_0368 at 396.090 kb on + strand, within Echvi_0368 at 396.091 kb on - strand, within Echvi_0368 at 396.094 kb on - strand, within Echvi_0368 at 396.094 kb on - strand, within Echvi_0368 at 396.094 kb on - strand, within Echvi_0368 at 396.203 kb on + strand at 396.204 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.001 mg/ml remove 395,065 + +1.2 395,069 - +1.0 395,108 + -1.0 395,173 + Echvi_0367 0.13 +0.3 395,174 - Echvi_0367 0.13 -0.2 395,242 + Echvi_0367 0.20 -1.3 395,267 + Echvi_0367 0.23 -0.8 395,292 - Echvi_0367 0.26 +0.2 395,328 + Echvi_0367 0.30 +0.2 395,338 - Echvi_0367 0.31 +1.1 395,359 - Echvi_0367 0.33 -1.0 395,381 - Echvi_0367 0.36 -0.5 395,388 - Echvi_0367 0.36 +0.8 395,406 - Echvi_0367 0.38 +0.1 395,414 + Echvi_0367 0.39 -0.3 395,415 - Echvi_0367 0.39 +1.0 395,416 + Echvi_0367 0.39 -1.0 395,417 - Echvi_0367 0.40 -0.2 395,417 - Echvi_0367 0.40 +0.5 395,417 - Echvi_0367 0.40 +0.0 395,417 - Echvi_0367 0.40 +2.8 395,417 - Echvi_0367 0.40 -1.5 395,417 - Echvi_0367 0.40 +0.7 395,502 + +0.8 395,563 + Echvi_0367 0.56 +0.3 395,576 + Echvi_0367 0.57 -0.3 395,596 + Echvi_0367 0.59 -1.2 395,596 + Echvi_0367 0.59 -0.3 395,596 + Echvi_0367 0.59 +0.9 395,596 + Echvi_0367 0.59 -1.5 395,596 + Echvi_0367 0.59 +0.7 395,597 - Echvi_0367 0.59 +0.1 395,597 - Echvi_0367 0.59 +0.5 395,602 + Echvi_0367 0.60 +0.9 395,640 - Echvi_0367 0.64 -0.0 395,659 + Echvi_0367 0.66 -0.3 395,659 + Echvi_0367 0.66 -1.7 395,660 - Echvi_0367 0.66 +0.0 395,660 - Echvi_0367 0.66 -1.5 395,712 - Echvi_0367 0.72 -1.0 395,713 + Echvi_0367 0.72 +0.0 395,713 + Echvi_0367 0.72 +0.5 395,713 + Echvi_0367 0.72 -1.1 395,714 - Echvi_0367 0.72 -0.2 395,750 - Echvi_0367 0.76 +0.8 395,759 + Echvi_0367 0.77 -0.8 395,759 + Echvi_0367 0.77 -0.7 395,760 - Echvi_0367 0.77 +0.1 395,891 - +0.8 395,891 - -1.3 395,892 + +0.2 395,893 - +0.4 395,912 - +0.2 395,936 + -0.3 395,948 + +1.2 396,015 + +0.6 396,027 + +0.0 396,032 + +0.5 396,032 + +0.7 396,032 + -0.4 396,053 + Echvi_0368 0.22 +0.2 396,053 + Echvi_0368 0.22 -1.6 396,053 + Echvi_0368 0.22 +0.8 396,090 + Echvi_0368 0.58 -0.6 396,091 - Echvi_0368 0.59 -2.1 396,094 - Echvi_0368 0.62 +0.1 396,094 - Echvi_0368 0.62 -0.9 396,094 - Echvi_0368 0.62 +0.4 396,203 + -0.3 396,204 - +1.8
Or see this region's nucleotide sequence