Experiment: m.b. Chloramphenicol 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0274 and Echvi_0275 are separated by 48 nucleotides Echvi_0275 and Echvi_0276 are separated by 100 nucleotides Echvi_0276 and Echvi_0277 are separated by 12 nucleotides
Echvi_0274: Echvi_0274 - Aminopeptidase N, at 276,586 to 279,156
_0274
Echvi_0275: Echvi_0275 - Acetyl/propionyl-CoA carboxylase, alpha subunit, at 279,205 to 279,699
_0275
Echvi_0276: Echvi_0276 - uridylate kinase, at 279,800 to 280,510
_0276
Echvi_0277: Echvi_0277 - ribosome recycling factor, at 280,523 to 281,083
_0277
Position (kb) 279
280 Strain fitness (log2 ratio) -2
-1
0
1 at 278.210 kb on + strand, within Echvi_0274 at 278.210 kb on + strand, within Echvi_0274 at 278.211 kb on - strand, within Echvi_0274 at 278.318 kb on + strand, within Echvi_0274 at 278.319 kb on - strand, within Echvi_0274 at 278.319 kb on - strand, within Echvi_0274 at 278.322 kb on - strand, within Echvi_0274 at 278.322 kb on - strand, within Echvi_0274 at 278.590 kb on + strand, within Echvi_0274 at 278.633 kb on + strand, within Echvi_0274 at 278.676 kb on + strand, within Echvi_0274 at 278.677 kb on - strand, within Echvi_0274 at 278.721 kb on + strand, within Echvi_0274 at 278.739 kb on + strand, within Echvi_0274 at 278.740 kb on - strand, within Echvi_0274 at 278.759 kb on - strand, within Echvi_0274 at 278.775 kb on - strand, within Echvi_0274 at 278.778 kb on + strand, within Echvi_0274 at 278.944 kb on - strand at 278.944 kb on - strand at 278.944 kb on - strand at 278.944 kb on - strand at 278.980 kb on - strand at 279.011 kb on - strand at 279.055 kb on + strand at 279.067 kb on - strand at 279.100 kb on - strand at 279.181 kb on - strand at 279.237 kb on + strand at 279.297 kb on - strand, within Echvi_0275 at 279.328 kb on - strand, within Echvi_0275 at 279.613 kb on - strand, within Echvi_0275 at 279.648 kb on - strand, within Echvi_0275 at 279.698 kb on - strand at 279.712 kb on - strand at 279.752 kb on + strand at 279.785 kb on + strand at 280.512 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.001 mg/ml remove 278,210 + Echvi_0274 0.63 -1.6 278,210 + Echvi_0274 0.63 +0.7 278,211 - Echvi_0274 0.63 +0.2 278,318 + Echvi_0274 0.67 +0.4 278,319 - Echvi_0274 0.67 -0.3 278,319 - Echvi_0274 0.67 +1.1 278,322 - Echvi_0274 0.68 -0.2 278,322 - Echvi_0274 0.68 -1.4 278,590 + Echvi_0274 0.78 +0.8 278,633 + Echvi_0274 0.80 -1.2 278,676 + Echvi_0274 0.81 -1.9 278,677 - Echvi_0274 0.81 -1.0 278,721 + Echvi_0274 0.83 -0.1 278,739 + Echvi_0274 0.84 +0.8 278,740 - Echvi_0274 0.84 +0.4 278,759 - Echvi_0274 0.85 +0.1 278,775 - Echvi_0274 0.85 +0.9 278,778 + Echvi_0274 0.85 -0.1 278,944 - -0.8 278,944 - +0.6 278,944 - -0.2 278,944 - +0.6 278,980 - -0.1 279,011 - -0.4 279,055 + +0.2 279,067 - -0.8 279,100 - +0.6 279,181 - -0.3 279,237 + -0.5 279,297 - Echvi_0275 0.19 -0.2 279,328 - Echvi_0275 0.25 -0.1 279,613 - Echvi_0275 0.82 -0.1 279,648 - Echvi_0275 0.89 -1.0 279,698 - +0.3 279,712 - -0.3 279,752 + +0.5 279,785 + -1.4 280,512 + +0.1
Or see this region's nucleotide sequence