Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4125

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
4,937,470	-				+0.8
4,937,491	+				-0.4
4,937,569	+				+1.8
4,937,572	+				+1.2
4,937,742	-		Echvi_4123	0.29	-0.3
4,937,776	+		Echvi_4123	0.35	+0.8
4,937,845	+		Echvi_4123	0.46	+0.1
4,937,846	-		Echvi_4123	0.46	-0.1
4,937,846	-		Echvi_4123	0.46	-2.5
4,937,846	-		Echvi_4123	0.46	+0.7
4,937,849	+		Echvi_4123	0.47	-0.3
4,937,852	+		Echvi_4123	0.47	+0.6
4,937,852	+		Echvi_4123	0.47	-1.2
4,937,853	-		Echvi_4123	0.47	+1.5
4,937,867	-		Echvi_4123	0.50	-0.9
4,937,867	-		Echvi_4123	0.50	-0.4
4,937,948	+		Echvi_4123	0.63	+1.9
4,937,949	-		Echvi_4123	0.63	+0.8
4,937,957	+		Echvi_4123	0.64	-1.4
4,938,025	+		Echvi_4123	0.76	-0.4
4,938,037	-		Echvi_4123	0.78	-0.8
4,938,079	-		Echvi_4123	0.85	+0.6
4,938,079	-		Echvi_4123	0.85	+0.8
4,938,144	-				+1.2
4,938,144	-				-0.5
4,938,194	+				-0.1
4,938,196	+				+1.0
4,938,205	+				+1.2
4,938,206	-				-0.9
4,938,217	+				-0.1
4,938,246	-		Echvi_4124	0.22	+1.1
4,938,308	-		Echvi_4124	0.51	-0.0
4,938,379	+		Echvi_4124	0.85	+0.3
4,938,380	-		Echvi_4124	0.86	-0.5
4,938,404	-				-1.1
4,938,412	+				-1.0
4,938,452	+				-0.2
4,938,473	+				-0.2
4,938,553	+				+0.5
4,938,555	+				-0.3
4,938,555	+				-0.3
4,938,556	-				-0.2
4,938,556	-				-0.2
4,938,572	+				-0.2
4,938,572	+				+0.7
4,938,579	-				+0.8
4,938,582	+				+0.1
4,938,585	+				+0.2
4,938,585	+				-0.4
4,938,585	+				-0.4
4,938,585	+				+0.4
4,938,585	+				+2.1
4,938,586	-				-0.8
4,938,586	-				-1.9
4,938,586	-				+0.5
4,938,586	-				+0.8
4,938,597	-				-0.8
4,938,710	+		Echvi_4125	0.12	+0.8
4,938,710	+		Echvi_4125	0.12	-0.5
4,938,711	-		Echvi_4125	0.12	-1.7
4,938,711	-		Echvi_4125	0.12	-0.8
4,938,714	+		Echvi_4125	0.12	-0.0
4,938,714	+		Echvi_4125	0.12	+0.0
4,938,714	+		Echvi_4125	0.12	+0.5
4,938,714	+		Echvi_4125	0.12	+0.5
4,938,714	+		Echvi_4125	0.12	-0.0
4,938,715	-		Echvi_4125	0.12	+0.1
4,938,715	-		Echvi_4125	0.12	-1.9
4,938,715	-		Echvi_4125	0.12	-0.1
4,938,715	-		Echvi_4125	0.12	-1.8
4,938,715	-		Echvi_4125	0.12	-0.8
4,938,741	-		Echvi_4125	0.13	-0.5
4,938,741	-		Echvi_4125	0.13	-0.8
4,938,741	-		Echvi_4125	0.13	-1.2
4,938,741	-		Echvi_4125	0.13	+0.1
4,938,932	+		Echvi_4125	0.22	-0.3
4,938,932	+		Echvi_4125	0.22	-0.5
4,938,932	+		Echvi_4125	0.22	+0.7
4,938,933	-		Echvi_4125	0.22	-0.6
4,938,934	+		Echvi_4125	0.22	-0.8
4,938,942	+		Echvi_4125	0.22	-0.2
4,938,949	-		Echvi_4125	0.23	-1.6
4,938,990	+		Echvi_4125	0.24	+0.5
4,938,991	-		Echvi_4125	0.24	-2.8
4,938,995	+		Echvi_4125	0.25	-0.3
4,938,995	+		Echvi_4125	0.25	-0.2
4,939,003	-		Echvi_4125	0.25	-0.1
4,939,026	+		Echvi_4125	0.26	-0.5
4,939,026	+		Echvi_4125	0.26	-0.2
4,939,107	+		Echvi_4125	0.30	+0.2
4,939,107	+		Echvi_4125	0.30	+0.1
4,939,108	-		Echvi_4125	0.30	+0.3
4,939,108	-		Echvi_4125	0.30	-0.5
4,939,108	-		Echvi_4125	0.30	-2.2
4,939,136	+		Echvi_4125	0.31	-0.7
4,939,142	+		Echvi_4125	0.31	-0.4
4,939,142	+		Echvi_4125	0.31	+0.2
4,939,144	+		Echvi_4125	0.31	-1.2
4,939,144	+		Echvi_4125	0.31	-0.2
4,939,144	+		Echvi_4125	0.31	+0.6
4,939,144	+		Echvi_4125	0.31	-0.1
4,939,144	+		Echvi_4125	0.31	-1.9
4,939,144	+		Echvi_4125	0.31	-1.5
4,939,144	+		Echvi_4125	0.31	-0.1
4,939,144	+		Echvi_4125	0.31	+0.6
4,939,145	-		Echvi_4125	0.31	-2.4
4,939,147	+		Echvi_4125	0.31	+0.4
4,939,148	-		Echvi_4125	0.31	-0.8
4,939,154	+		Echvi_4125	0.32	+0.2
4,939,154	+		Echvi_4125	0.32	-0.8
4,939,155	-		Echvi_4125	0.32	+1.4
4,939,163	+		Echvi_4125	0.32	-0.2
4,939,209	+		Echvi_4125	0.34	+0.2
4,939,210	-		Echvi_4125	0.34	-1.1
4,939,239	+		Echvi_4125	0.36	-0.2
4,939,312	+		Echvi_4125	0.39	+0.6
4,939,340	-		Echvi_4125	0.40	-0.5
4,939,361	+		Echvi_4125	0.41	-3.3
4,939,362	-		Echvi_4125	0.41	+0.3
4,939,392	+		Echvi_4125	0.42	+0.0
4,939,393	-		Echvi_4125	0.42	-0.2
4,939,393	-		Echvi_4125	0.42	-0.5
4,939,393	-		Echvi_4125	0.42	+0.2
4,939,397	+		Echvi_4125	0.43	-0.5
4,939,397	+		Echvi_4125	0.43	-1.4
4,939,398	-		Echvi_4125	0.43	-2.1
4,939,398	-		Echvi_4125	0.43	-0.3
4,939,398	-		Echvi_4125	0.43	-0.0
4,939,398	-		Echvi_4125	0.43	-0.2
4,939,403	+		Echvi_4125	0.43	-0.7
4,939,477	-		Echvi_4125	0.46	-0.2
4,939,481	+		Echvi_4125	0.46	-1.3
4,939,594	-		Echvi_4125	0.51	+0.1
4,939,599	-		Echvi_4125	0.52	-0.1
4,939,605	-		Echvi_4125	0.52	-1.4
4,939,638	+		Echvi_4125	0.53	-0.9
4,939,851	+		Echvi_4125	0.63	+0.1
4,939,851	+		Echvi_4125	0.63	+0.8
4,939,852	-		Echvi_4125	0.63	+1.0
4,939,852	-		Echvi_4125	0.63	+0.2
4,939,852	-		Echvi_4125	0.63	+0.6
4,939,852	-		Echvi_4125	0.63	+0.7
4,939,852	-		Echvi_4125	0.63	-0.1
4,939,852	-		Echvi_4125	0.63	+0.2
4,939,854	-		Echvi_4125	0.63	-0.3
4,939,854	-		Echvi_4125	0.63	-0.5
4,939,855	+		Echvi_4125	0.63	+0.3
4,939,855	+		Echvi_4125	0.63	+0.2
4,940,076	-		Echvi_4125	0.73	-0.2
4,940,082	-		Echvi_4125	0.73	+0.2
4,940,098	+		Echvi_4125	0.74	-1.4
4,940,098	+		Echvi_4125	0.74	-0.0
4,940,099	-		Echvi_4125	0.74	-0.1
4,940,101	+		Echvi_4125	0.74	-0.6
4,940,101	+		Echvi_4125	0.74	-2.1
4,940,101	+		Echvi_4125	0.74	-0.7
4,940,102	-		Echvi_4125	0.74	+0.2
4,940,177	+		Echvi_4125	0.77	+0.4
4,940,177	+		Echvi_4125	0.77	-1.2
4,940,177	+		Echvi_4125	0.77	-1.8
4,940,177	+		Echvi_4125	0.77	-0.9
4,940,178	-		Echvi_4125	0.77	+1.0
4,940,183	+		Echvi_4125	0.78	-1.0
4,940,183	+		Echvi_4125	0.78	-0.5
4,940,187	+		Echvi_4125	0.78	-1.6
4,940,187	+		Echvi_4125	0.78	-0.3
4,940,188	-		Echvi_4125	0.78	+0.2
4,940,188	-		Echvi_4125	0.78	+0.7
4,940,188	-		Echvi_4125	0.78	-0.4
4,940,188	-		Echvi_4125	0.78	+1.5
4,940,188	-		Echvi_4125	0.78	+0.3
4,940,243	+		Echvi_4125	0.80	+0.3
4,940,247	-		Echvi_4125	0.81	-1.1
4,940,266	+		Echvi_4125	0.81	-1.0
4,940,285	+		Echvi_4125	0.82	-0.6
4,940,285	+		Echvi_4125	0.82	+0.7
4,940,286	-		Echvi_4125	0.82	-0.3
4,940,342	+		Echvi_4125	0.85	-0.3
4,940,347	-		Echvi_4125	0.85	-0.0
4,940,453	+		Echvi_4125	0.90	+0.1
4,940,454	-		Echvi_4125	0.90	+0.4
4,940,462	-				+0.4
4,940,501	+				-0.4
4,940,520	+				+0.0
4,940,521	-				-1.2
4,940,580	+				-1.0
4,940,650	-				+0.6
4,940,703	+				-1.0
4,940,828	+				+1.1
4,940,866	-		Echvi_4126	0.16	+1.2
4,940,870	-				+0.2
4,940,870	-		Echvi_4126	0.17	+0.7
4,940,877	-		Echvi_4126	0.18	-0.2
4,940,884	+		Echvi_4126	0.19	+1.8
4,940,885	-		Echvi_4126	0.19	-0.5
4,940,927	-		Echvi_4126	0.27	+0.4
4,940,969	+		Echvi_4126	0.34	+1.8
4,941,025	+		Echvi_4126	0.44	-0.1
4,941,037	-		Echvi_4126	0.46	-1.0
4,941,037	-		Echvi_4126	0.46	-0.3
4,941,042	-		Echvi_4126	0.47	-0.2
4,941,042	-		Echvi_4126	0.47	-0.4
4,941,086	+		Echvi_4126	0.55	-0.1
4,941,191	+		Echvi_4126	0.73	-1.0
4,941,191	+		Echvi_4126	0.73	+0.2
4,941,192	-		Echvi_4126	0.73	+1.2
4,941,192	-		Echvi_4126	0.73	+1.4
4,941,229	-		Echvi_4126	0.80	-0.5
4,941,237	+		Echvi_4126	0.81	-0.4
4,941,237	+		Echvi_4126	0.81	-1.2
4,941,238	-		Echvi_4126	0.81	+0.1
4,941,243	+		Echvi_4126	0.82	-0.1
4,941,243	+		Echvi_4126	0.82	+0.8
4,941,244	-		Echvi_4126	0.82	-0.8
4,941,296	+				-0.7
4,941,320	+				-0.7
4,941,321	-				-0.1
4,941,324	-				+1.1
4,941,333	+				+3.8
4,941,334	-				-0.9
4,941,334	-				-0.5
4,941,334	-				+0.7
4,941,334	-				-0.1
4,941,338	+				-0.4
4,941,338	+				-0.4
4,941,338	+				-0.3
4,941,360	+				-0.4
4,941,361	-				-0.2
4,941,367	+				-0.8
4,941,367	+				+0.4
4,941,367	+				-0.2
4,941,367	+				+1.8
4,941,368	-				-0.3
4,941,368	-				+1.1
4,941,368	-				+0.8
4,941,368	-				-0.1
4,941,370	+				-2.0
4,941,370	+				-1.9
4,941,371	-				+0.1
4,941,371	-				+0.7
4,941,371	-				-0.0
4,941,371	-				-1.8
4,941,371	-				-0.2
4,941,378	-				-0.1
4,941,379	+				+0.1
4,941,379	+				+0.2
4,941,380	-				-0.6
4,941,387	+				-1.7
4,941,391	+				+0.3
4,941,391	+				-0.6
4,941,391	+				+0.4
4,941,440	-				-0.4
4,941,440	-				+1.4
4,941,461	+				+1.2
4,941,461	+				+0.6
4,941,462	-				-1.0
4,941,473	+				-0.6
4,941,532	-				+0.1
4,941,532	-				-1.2
4,941,532	-				+0.4
4,941,547	+				+1.8
4,941,547	+				+1.0
4,941,547	+				-0.4
4,941,547	+				+0.2
4,941,548	-				+1.4
4,941,548	-				+1.0
4,941,548	-				-0.5
4,941,566	-				-0.2
4,941,568	+				+0.8
4,941,570	+				+0.9
4,941,570	+				+0.2
4,941,571	-				+0.3
4,941,632	-		Echvi_4127	0.12	+0.8
4,941,632	-		Echvi_4127	0.12	+0.4
4,941,654	-		Echvi_4127	0.13	+0.2