Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3916

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
4,686,243	+		Echvi_3915	0.42	-0.5
4,686,314	+		Echvi_3915	0.46	+0.2
4,686,340	+		Echvi_3915	0.48	-1.5
4,686,351	+		Echvi_3915	0.49	-2.1
4,686,351	+		Echvi_3915	0.49	-1.8
4,686,352	-		Echvi_3915	0.49	-0.3
4,686,352	-		Echvi_3915	0.49	-1.3
4,686,352	-		Echvi_3915	0.49	-0.3
4,686,362	-		Echvi_3915	0.49	+0.7
4,686,497	-		Echvi_3915	0.58	-0.9
4,686,537	-		Echvi_3915	0.60	-1.3
4,686,572	+		Echvi_3915	0.62	-0.0
4,686,573	-		Echvi_3915	0.63	+0.6
4,686,573	-		Echvi_3915	0.63	-0.6
4,686,573	-		Echvi_3915	0.63	+0.9
4,686,653	+		Echvi_3915	0.68	-1.0
4,686,653	+		Echvi_3915	0.68	+1.1
4,686,674	+		Echvi_3915	0.69	+0.3
4,686,675	-		Echvi_3915	0.69	+1.3
4,686,717	+		Echvi_3915	0.72	-0.6
4,686,719	+		Echvi_3915	0.72	+2.7
4,686,734	+		Echvi_3915	0.73	-0.2
4,686,735	-		Echvi_3915	0.73	-1.0
4,686,735	-		Echvi_3915	0.73	-0.3
4,686,885	+		Echvi_3915	0.82	-0.3
4,686,885	+		Echvi_3915	0.82	-2.7
4,686,886	-		Echvi_3915	0.82	-0.6
4,686,886	-		Echvi_3915	0.82	-0.9
4,686,908	+		Echvi_3915	0.83	+1.3
4,686,908	+		Echvi_3915	0.83	+2.3
4,686,909	-		Echvi_3915	0.83	+0.2
4,686,909	-		Echvi_3915	0.83	+0.1
4,686,909	-		Echvi_3915	0.83	-0.7
4,686,929	+		Echvi_3915	0.85	+0.9
4,686,976	-		Echvi_3915	0.88	+0.0
4,687,028	+				-0.3
4,687,029	-				-0.4
4,687,136	-				-0.7
4,687,159	+				-1.2
4,687,160	-				-0.5
4,687,160	-				-1.1
4,687,200	-				+0.5
4,687,247	+				-1.6
4,687,247	+				-0.8
4,687,247	+				-0.3
4,687,249	+				-0.8
4,687,249	+				+1.7
4,687,249	+				-0.1
4,687,361	+				-2.3
4,687,471	+				+0.1
4,687,472	-				-0.4
4,687,474	+				+0.1
4,687,475	-				+0.3
4,687,475	-				+0.1
4,687,511	+		Echvi_3916	0.11	-0.9
4,687,512	-		Echvi_3916	0.11	-0.1
4,687,541	+		Echvi_3916	0.12	+0.1
4,687,564	+		Echvi_3916	0.13	-0.4
4,687,565	-		Echvi_3916	0.13	-0.6
4,687,590	-		Echvi_3916	0.13	+0.1
4,687,590	-		Echvi_3916	0.13	-0.8
4,687,601	+		Echvi_3916	0.14	+0.8
4,687,601	+		Echvi_3916	0.14	-0.1
4,687,602	-		Echvi_3916	0.14	+0.5
4,687,603	+		Echvi_3916	0.14	-1.1
4,687,636	+		Echvi_3916	0.15	-0.1
4,687,636	+		Echvi_3916	0.15	-0.5
4,687,637	-		Echvi_3916	0.15	-0.2
4,687,637	-		Echvi_3916	0.15	+0.0
4,687,663	+		Echvi_3916	0.16	+0.3
4,687,664	-		Echvi_3916	0.16	-1.7
4,687,751	+		Echvi_3916	0.19	+0.0
4,687,753	+		Echvi_3916	0.19	-0.6
4,687,753	+		Echvi_3916	0.19	-1.4
4,687,754	-		Echvi_3916	0.19	+0.9
4,687,754	-		Echvi_3916	0.19	-1.5
4,687,760	-		Echvi_3916	0.19	-0.8
4,687,765	+		Echvi_3916	0.19	-0.4
4,687,766	-		Echvi_3916	0.19	-2.0
4,687,822	-		Echvi_3916	0.21	+1.1
4,687,827	-		Echvi_3916	0.21	-0.5
4,687,847	+		Echvi_3916	0.22	-0.8
4,687,847	+		Echvi_3916	0.22	-1.0
4,687,850	+		Echvi_3916	0.22	-0.6
4,687,851	-		Echvi_3916	0.22	-0.1
4,687,851	-		Echvi_3916	0.22	-1.1
4,687,856	+		Echvi_3916	0.22	+0.3
4,687,857	-		Echvi_3916	0.22	+0.2
4,687,871	+		Echvi_3916	0.22	-0.3
4,688,009	+		Echvi_3916	0.27	+1.1
4,688,010	-		Echvi_3916	0.27	-0.7
4,688,021	+		Echvi_3916	0.27	-0.1
4,688,022	-		Echvi_3916	0.27	+1.7
4,688,022	-		Echvi_3916	0.27	-0.6
4,688,029	+		Echvi_3916	0.27	-0.2
4,688,066	+		Echvi_3916	0.29	+0.5
4,688,071	+		Echvi_3916	0.29	-1.1
4,688,250	-		Echvi_3916	0.35	-0.6
4,688,360	+		Echvi_3916	0.38	-1.2
4,688,361	-		Echvi_3916	0.38	+1.1
4,688,366	+		Echvi_3916	0.38	+0.2
4,688,366	+		Echvi_3916	0.38	-0.8
4,688,367	-		Echvi_3916	0.38	-1.5
4,688,367	-		Echvi_3916	0.38	+0.2
4,688,384	+		Echvi_3916	0.39	-0.5
4,688,384	+		Echvi_3916	0.39	-0.3
4,688,389	+		Echvi_3916	0.39	+0.4
4,688,389	+		Echvi_3916	0.39	-1.9
4,688,398	+		Echvi_3916	0.39	-0.2
4,688,452	+		Echvi_3916	0.41	-1.2
4,688,453	-		Echvi_3916	0.41	-0.7
4,688,482	+		Echvi_3916	0.42	-0.2
4,688,483	-		Echvi_3916	0.42	-2.3
4,688,492	+		Echvi_3916	0.42	-0.3
4,688,493	-		Echvi_3916	0.42	+0.2
4,688,493	-		Echvi_3916	0.42	+0.7
4,688,495	+		Echvi_3916	0.43	-0.4
4,688,495	+		Echvi_3916	0.43	+0.0
4,688,496	-		Echvi_3916	0.43	+1.1
4,688,522	+		Echvi_3916	0.43	-0.5
4,688,523	-		Echvi_3916	0.43	-1.6
4,688,524	+		Echvi_3916	0.43	-0.2
4,688,533	+		Echvi_3916	0.44	-0.2
4,688,533	+		Echvi_3916	0.44	+0.3
4,688,602	-		Echvi_3916	0.46	-1.9
4,688,672	+		Echvi_3916	0.48	+0.4
4,688,729	+		Echvi_3916	0.50	-0.4
4,688,730	-		Echvi_3916	0.50	-1.1
4,688,803	+		Echvi_3916	0.52	-0.5
4,688,803	+		Echvi_3916	0.52	+0.1
4,688,803	+		Echvi_3916	0.52	+0.7
4,688,804	-		Echvi_3916	0.52	+0.5
4,688,824	+		Echvi_3916	0.53	-0.4
4,688,825	-		Echvi_3916	0.53	-2.2
4,688,893	+		Echvi_3916	0.55	-1.3
4,688,893	+		Echvi_3916	0.55	+1.2
4,688,908	+		Echvi_3916	0.56	+1.5
4,688,908	+		Echvi_3916	0.56	-0.6
4,688,909	-		Echvi_3916	0.56	-1.5
4,688,969	+		Echvi_3916	0.58	-0.8
4,688,970	-		Echvi_3916	0.58	+0.6
4,688,970	-		Echvi_3916	0.58	-0.2
4,688,970	-		Echvi_3916	0.58	-0.7
4,688,972	+		Echvi_3916	0.58	-0.7
4,688,973	-		Echvi_3916	0.58	-0.5
4,688,981	+		Echvi_3916	0.58	-0.8
4,688,982	-		Echvi_3916	0.58	-0.3
4,688,982	-		Echvi_3916	0.58	-1.0
4,689,035	-		Echvi_3916	0.60	+0.6
4,689,064	+		Echvi_3916	0.61	-0.5
4,689,064	+		Echvi_3916	0.61	-0.0
4,689,065	-		Echvi_3916	0.61	-1.3
4,689,065	-		Echvi_3916	0.61	-0.1
4,689,112	-		Echvi_3916	0.62	-0.6
4,689,112	-		Echvi_3916	0.62	+0.5
4,689,146	+		Echvi_3916	0.64	-0.9
4,689,156	+		Echvi_3916	0.64	+0.7
4,689,271	+		Echvi_3916	0.68	-0.5
4,689,271	+		Echvi_3916	0.68	+0.8
4,689,292	+		Echvi_3916	0.68	+0.0
4,689,293	-		Echvi_3916	0.68	-0.6
4,689,293	-		Echvi_3916	0.68	+0.7
4,689,365	+		Echvi_3916	0.71	+1.0
4,689,365	+		Echvi_3916	0.71	-1.3
4,689,438	-		Echvi_3916	0.73	-1.2
4,689,473	+		Echvi_3916	0.74	-0.6
4,689,473	+		Echvi_3916	0.74	-0.1
4,689,473	+		Echvi_3916	0.74	-0.0
4,689,474	-		Echvi_3916	0.74	-1.7
4,689,474	-		Echvi_3916	0.74	+0.4
4,689,475	+		Echvi_3916	0.74	-0.4
4,689,536	+		Echvi_3916	0.76	-1.1
4,689,536	+		Echvi_3916	0.76	-0.6
4,689,553	+		Echvi_3916	0.77	-0.1
4,689,554	-		Echvi_3916	0.77	+0.7
4,689,555	+		Echvi_3916	0.77	+0.9
4,689,555	+		Echvi_3916	0.77	-0.5
4,689,555	+		Echvi_3916	0.77	+0.2
4,689,555	+		Echvi_3916	0.77	+0.1
4,689,555	+		Echvi_3916	0.77	+0.7
4,689,556	-		Echvi_3916	0.77	-1.1
4,689,556	-		Echvi_3916	0.77	-1.3
4,689,674	+		Echvi_3916	0.81	+0.2
4,689,697	-		Echvi_3916	0.81	-2.1
4,689,699	-		Echvi_3916	0.81	+0.4
4,689,703	+		Echvi_3916	0.81	+0.3
4,689,728	+		Echvi_3916	0.82	-0.2
4,689,789	+		Echvi_3916	0.84	-0.3
4,689,867	+		Echvi_3916	0.87	+0.9
4,689,867	+		Echvi_3916	0.87	-0.3
4,689,867	+		Echvi_3916	0.87	-0.1
4,689,867	+		Echvi_3916	0.87	+0.4
4,689,888	+		Echvi_3916	0.87	-0.8
4,689,888	+		Echvi_3916	0.87	+0.4
4,689,888	+		Echvi_3916	0.87	-1.5
4,689,888	+		Echvi_3916	0.87	-0.4
4,689,888	+		Echvi_3916	0.87	-0.9
4,689,889	-		Echvi_3916	0.87	-0.1
4,689,889	-		Echvi_3916	0.87	+0.4
4,689,889	-		Echvi_3916	0.87	+0.1
4,690,010	+				-1.2
4,690,010	+				-1.5
4,690,011	-				-1.2
4,690,013	-				+0.5
4,690,055	+				-0.7
4,690,056	-				-0.2
4,690,056	-				+0.0
4,690,067	-				-0.1
4,690,077	+				+1.0
4,690,077	+				-0.8
4,690,077	+				-0.1
4,690,078	-				+0.3
4,690,078	-				-0.8
4,690,078	-				+0.7
4,690,078	-				+1.3
4,690,078	-				-1.2
4,690,131	+				+0.1
4,690,132	-				-0.6
4,690,146	-				-1.9
4,690,169	+				-0.7
4,690,169	+				-1.3
4,690,223	+				+0.3
4,690,223	+				+0.5
4,690,223	+				+0.3
4,690,223	+				+0.7
4,690,223	+				-0.2
4,690,223	+				-0.5
4,690,224	-				-0.3
4,690,224	-				-0.8
4,690,224	-				-0.8
4,690,225	+				+0.6
4,690,225	+				+1.3
4,690,225	+				-0.4
4,690,225	+				+0.7
4,690,226	-				+1.0
4,690,284	-				-0.4
4,690,341	+				-1.2
4,690,377	+				-1.2
4,690,379	+				+0.4
4,690,388	-				+0.3
4,690,567	+				+0.1
4,690,707	-				+0.2
4,690,775	+				+0.8
4,690,840	-				+0.3
4,690,852	+				+1.7
4,690,858	+				-2.7
4,690,863	+				+0.9
4,690,974	-				-0.6
4,690,983	+				-0.9
4,691,024	+		Echvi_3917	0.13	-0.3
4,691,024	+		Echvi_3917	0.13	-0.2
4,691,024	+		Echvi_3917	0.13	+0.3
4,691,025	-		Echvi_3917	0.13	-0.2
4,691,025	-		Echvi_3917	0.13	+0.8
4,691,025	-		Echvi_3917	0.13	-0.2
4,691,025	-		Echvi_3917	0.13	-0.7
4,691,026	+		Echvi_3917	0.13	+0.3
4,691,026	+		Echvi_3917	0.13	-0.7
4,691,026	+		Echvi_3917	0.13	-0.6
4,691,026	+		Echvi_3917	0.13	+0.1
4,691,027	-		Echvi_3917	0.13	+0.0
4,691,027	-		Echvi_3917	0.13	+0.5
4,691,027	-		Echvi_3917	0.13	-0.6
4,691,027	-		Echvi_3917	0.13	-0.6
4,691,027	-		Echvi_3917	0.13	+0.1
4,691,027	-		Echvi_3917	0.13	-1.2
4,691,027	-		Echvi_3917	0.13	-0.3
4,691,027	-		Echvi_3917	0.13	-1.1
4,691,027	-		Echvi_3917	0.13	+0.7
4,691,027	-		Echvi_3917	0.13	-0.3
4,691,027	-		Echvi_3917	0.13	+2.7
4,691,027	-		Echvi_3917	0.13	+0.4
4,691,028	+		Echvi_3917	0.13	-0.3
4,691,028	+		Echvi_3917	0.13	+0.5
4,691,028	+		Echvi_3917	0.13	+0.0
4,691,028	+		Echvi_3917	0.13	-0.7
4,691,029	-		Echvi_3917	0.13	+0.3
4,691,029	-		Echvi_3917	0.13	+0.2
4,691,029	-		Echvi_3917	0.13	-1.0
4,691,029	-		Echvi_3917	0.13	+0.0
4,691,029	-		Echvi_3917	0.13	+0.6
4,691,040	-		Echvi_3917	0.14	-0.5
4,691,040	-		Echvi_3917	0.14	+0.7
4,691,040	-		Echvi_3917	0.14	-0.5
4,691,043	+		Echvi_3917	0.14	+0.2
4,691,071	+		Echvi_3917	0.16	-2.2
4,691,072	-		Echvi_3917	0.16	+1.1
4,691,118	-		Echvi_3917	0.19	-1.1
4,691,120	+		Echvi_3917	0.20	-0.6
4,691,121	-		Echvi_3917	0.20	-0.4
4,691,162	+		Echvi_3917	0.23	-0.3
4,691,162	+		Echvi_3917	0.23	-0.4
4,691,163	-		Echvi_3917	0.23	+0.1
4,691,163	-		Echvi_3917	0.23	-0.5
4,691,172	-		Echvi_3917	0.23	-0.1
4,691,172	-		Echvi_3917	0.23	+0.0
4,691,175	-		Echvi_3917	0.24	-1.9
4,691,198	+		Echvi_3917	0.25	-1.4