Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3097

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,699,532	-		Echvi_3096	0.25	+1.7
3,699,559	-		Echvi_3096	0.29	-0.6
3,699,575	+		Echvi_3096	0.31	+0.1
3,699,576	-		Echvi_3096	0.31	+0.6
3,699,580	-		Echvi_3096	0.31	-0.6
3,699,580	-		Echvi_3096	0.31	+0.6
3,699,582	+		Echvi_3096	0.32	+1.3
3,699,582	+		Echvi_3096	0.32	+0.7
3,699,585	+		Echvi_3096	0.32	-1.9
3,699,586	-		Echvi_3096	0.32	+0.7
3,699,633	+		Echvi_3096	0.38	-0.3
3,699,670	-		Echvi_3096	0.43	+1.7
3,699,690	-		Echvi_3096	0.46	-0.4
3,699,704	+		Echvi_3096	0.48	-0.7
3,699,757	-		Echvi_3096	0.55	+0.8
3,699,757	-		Echvi_3096	0.55	+0.7
3,699,785	+		Echvi_3096	0.59	+1.2
3,699,852	+		Echvi_3096	0.68	-0.3
3,699,853	-		Echvi_3096	0.68	+0.3
3,699,853	-		Echvi_3096	0.68	-0.9
3,699,854	+		Echvi_3096	0.68	+0.0
3,699,854	+		Echvi_3096	0.68	-2.5
3,699,920	+		Echvi_3096	0.77	+0.6
3,699,921	-		Echvi_3096	0.77	+2.7
3,699,921	-		Echvi_3096	0.77	-0.3
3,699,921	-		Echvi_3096	0.77	+1.3
3,699,921	-		Echvi_3096	0.77	-0.9
3,699,953	-		Echvi_3096	0.81	+2.0
3,700,031	-				+0.7
3,700,051	-				-0.1
3,700,059	-				-0.4
3,700,064	-				-1.4
3,700,092	+				-0.6
3,700,098	+				+1.9
3,700,098	+				+1.7
3,700,099	-				-0.3
3,700,102	-				+0.4
3,700,102	-				+0.5
3,700,128	+				-0.6
3,700,128	+				-1.2
3,700,160	-				+0.4
3,700,196	-				+0.1
3,700,198	+				+1.1
3,700,221	+				+0.7
3,700,221	+				-0.4
3,700,229	+				-0.6
3,700,257	+				-0.6
3,700,268	+				-0.1
3,700,268	+				-0.7
3,700,268	+				-1.6
3,700,268	+				-0.2
3,700,269	-				+0.4
3,700,269	-				+0.7
3,700,269	-				-0.0
3,700,269	-				+0.5
3,700,269	-				-0.9
3,700,269	-				-0.5
3,700,269	-				-1.1
3,700,269	-				+1.6
3,700,312	+				+0.3
3,700,320	+				-0.2
3,700,320	+				-0.4
3,700,337	+				-0.3
3,700,337	+				+0.7
3,700,337	+				+0.8
3,700,337	+				-0.6
3,700,337	+				-0.3
3,700,337	+				+0.5
3,700,337	+				+0.6
3,700,338	-				+0.1
3,700,338	-				+1.7
3,700,390	-				-0.1
3,700,390	-				+0.2
3,700,403	+				+1.7
3,700,403	+				-0.8
3,700,403	+				+1.1
3,700,403	+				-0.4
3,700,404	-				+1.4
3,700,404	-				-0.5
3,700,404	-				+0.7
3,700,404	-				-1.5
3,700,404	-				-0.7
3,700,404	-				-0.3
3,700,439	+				+0.7
3,700,440	-				+1.3
3,700,445	+				-1.6
3,700,452	+				+0.2
3,700,452	+				-0.4
3,700,452	+				-0.0
3,700,452	+				-0.6
3,700,453	-				-0.3
3,700,453	-				+0.8
3,700,453	-				-0.7
3,700,453	-				+0.7
3,700,454	+				+0.8
3,700,454	+				-0.3
3,700,454	+				+0.4
3,700,454	+				+0.4
3,700,455	-				+1.7
3,700,455	-				-0.3
3,700,455	-				+0.1
3,700,455	-				-1.3
3,700,455	-				+0.5
3,700,455	-				-0.6
3,700,455	-				+1.9
3,700,456	+				+0.1
3,700,456	+				+0.1
3,700,456	+				-1.2
3,700,457	-				+0.1
3,700,457	-				+0.6
3,700,457	-				-0.5
3,700,457	-				-0.3
3,700,503	+				-1.1
3,700,503	+				+0.1
3,700,504	-				+1.4
3,700,527	+				-0.8
3,700,528	-				-1.5
3,700,528	-				+0.1
3,700,573	-		Echvi_3097	0.17	-1.4
3,700,592	-		Echvi_3097	0.19	-0.5
3,700,610	+		Echvi_3097	0.22	+1.1
3,700,626	+		Echvi_3097	0.24	-2.4
3,700,626	+		Echvi_3097	0.24	-1.3
3,700,627	-		Echvi_3097	0.24	-0.9
3,700,627	-		Echvi_3097	0.24	-0.8
3,700,707	-		Echvi_3097	0.36	+1.2
3,700,754	+		Echvi_3097	0.43	-0.3
3,700,759	-		Echvi_3097	0.44	-0.1
3,700,858	+		Echvi_3097	0.58	+0.5
3,700,859	-		Echvi_3097	0.58	-0.8
3,700,888	-		Echvi_3097	0.63	-2.1
3,700,899	+		Echvi_3097	0.64	+1.1
3,700,900	-		Echvi_3097	0.64	+0.6
3,700,953	+		Echvi_3097	0.72	-2.0
3,700,953	+		Echvi_3097	0.72	-0.6
3,700,954	-		Echvi_3097	0.72	+0.2
3,700,954	-		Echvi_3097	0.72	+0.1
3,700,981	+		Echvi_3097	0.76	-0.0
3,700,997	-		Echvi_3097	0.79	-3.1
3,701,005	-		Echvi_3097	0.80	-0.9
3,701,065	-		Echvi_3097	0.88	+0.1
3,701,117	+				-0.2
3,701,119	+				-0.1
3,701,119	+				+0.9
3,701,120	-				+1.3
3,701,120	-				-0.1
3,701,120	-				+0.7
3,701,124	-				-0.2
3,701,124	-				-0.3
3,701,141	+				+0.3
3,701,236	-				+1.1
3,701,240	+				-0.8
3,701,241	-				-0.9
3,701,241	-				-0.6
3,701,359	-				-0.4
3,701,375	+				+0.3
3,701,390	-				-1.3
3,701,416	+				-1.2
3,701,416	+				-2.4
3,701,417	-				+0.1
3,701,417	-				-0.3
3,701,417	-				-0.1
3,701,419	-				-2.6
3,701,455	+				+1.2
3,701,455	+				+0.7
3,701,456	-				+0.3
3,701,456	-				-0.8
3,701,459	+				+0.3
3,701,459	+				-0.0
3,701,459	+				+0.4
3,701,460	-				-1.3
3,701,460	-				-0.1
3,701,460	-				+1.2
3,701,460	-				+0.5
3,701,460	-				+0.1
3,701,462	+				+0.5
3,701,462	+				-0.2
3,701,462	+				+0.2
3,701,462	+				-1.2
3,701,463	-				-0.6
3,701,464	+				-0.3
3,701,465	-				-0.0
3,701,476	+				+0.1
3,701,476	+				-0.9
3,701,536	+				-0.1
3,701,566	-				+0.2
3,701,598	+				-0.4
3,701,599	-				+0.7
3,701,626	-				+0.7
3,701,653	+				-0.1
3,701,653	+				-0.6
3,701,653	+				+1.1
3,701,653	+				-0.1
3,701,653	+				+1.3
3,701,653	+				-0.5
3,701,653	+				+0.0
3,701,654	-				+0.7
3,701,654	-				-0.6
3,701,654	-				-0.3
3,701,654	-				+1.5
3,701,654	-				+0.7
3,701,654	-				+0.8
3,701,666	+				-1.4
3,701,678	-				-0.6
3,701,678	-				-0.5
3,701,702	+				+0.1
3,701,703	-				-1.1
3,701,703	-				+0.1
3,701,708	-				+1.7
3,701,708	-				+0.7
3,701,708	-				-0.5
3,701,708	-				+1.1
3,701,719	+				+2.1
3,701,776	+				+0.1
3,701,971	+		Echvi_3098	0.19	+0.5
3,702,010	-		Echvi_3098	0.23	-0.3
3,702,010	-		Echvi_3098	0.23	+0.7
3,702,010	-		Echvi_3098	0.23	+0.1
3,702,016	+		Echvi_3098	0.23	-0.4
3,702,017	-		Echvi_3098	0.23	-0.4
3,702,125	-		Echvi_3098	0.34	+0.2