Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1699

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,993,359	+		Echvi_1698	0.80	+0.8
1,993,385	+		Echvi_1698	0.80	-0.7
1,993,386	-		Echvi_1698	0.80	-0.2
1,993,430	+		Echvi_1698	0.82	-0.4
1,993,430	+		Echvi_1698	0.82	-1.4
1,993,430	+		Echvi_1698	0.82	-1.7
1,993,431	-		Echvi_1698	0.82	-0.5
1,993,431	-		Echvi_1698	0.82	+0.9
1,993,431	-		Echvi_1698	0.82	+0.1
1,993,435	-		Echvi_1698	0.82	+1.9
1,993,435	-		Echvi_1698	0.82	-0.7
1,993,435	-		Echvi_1698	0.82	+0.5
1,993,444	+		Echvi_1698	0.82	-2.5
1,993,445	-		Echvi_1698	0.82	-0.7
1,993,445	-		Echvi_1698	0.82	+0.7
1,993,445	-		Echvi_1698	0.82	-0.3
1,993,445	-		Echvi_1698	0.82	-0.2
1,993,445	-		Echvi_1698	0.82	-0.7
1,993,451	+		Echvi_1698	0.82	-1.3
1,993,452	-		Echvi_1698	0.83	+0.4
1,993,473	+		Echvi_1698	0.83	-0.0
1,993,474	-		Echvi_1698	0.83	-0.3
1,993,509	+		Echvi_1698	0.84	+0.6
1,993,510	-		Echvi_1698	0.84	-2.0
1,993,510	-		Echvi_1698	0.84	-0.7
1,993,512	-		Echvi_1698	0.84	+0.2
1,993,582	-		Echvi_1698	0.87	+0.5
1,993,582	-		Echvi_1698	0.87	+3.0
1,993,692	+		Echvi_1698	0.90	+0.4
1,993,692	+		Echvi_1698	0.90	-0.0
1,993,693	-		Echvi_1698	0.90	+0.4
1,993,716	-				+0.3
1,993,787	+				+0.5
1,993,847	+				-2.4
1,993,848	-				+0.4
1,993,848	-				+0.2
1,993,848	-				+0.1
1,993,851	+				+0.0
1,993,851	+				+1.9
1,993,874	+				-2.2
1,993,883	+				-1.5
1,993,957	-				+1.9
1,993,989	+				-0.5
1,993,990	-				-0.7
1,993,992	+				-0.1
1,993,992	+				-1.4
1,993,992	+				-0.8
1,993,992	+				+0.1
1,993,993	-				+1.6
1,993,993	-				+0.9
1,993,993	-				-1.0
1,993,993	-				+0.4
1,993,994	+				-1.0
1,993,995	-				+1.2
1,993,995	-				-1.0
1,993,997	+				+0.8
1,994,074	+				+1.2
1,994,132	-				-0.9
1,994,219	+				-0.3
1,994,220	-				+0.3
1,994,222	+				-0.5
1,994,222	+				+1.5
1,994,222	+				+0.3
1,994,222	+				-1.3
1,994,223	-				-1.3
1,994,223	-				+0.9
1,994,223	-				+0.3
1,994,224	+				-0.5
1,994,224	+				-0.0
1,994,235	+				+0.6
1,994,266	+				+1.1
1,994,267	-				+1.2
1,994,312	+				-0.8
1,994,313	-				+0.6
1,994,361	-				-1.7
1,994,374	-				+0.9
1,994,374	-				-0.7
1,994,374	-				+0.5
1,994,374	-				+0.3
1,994,374	-				+0.9
1,994,374	-				+0.2
1,994,467	+				-0.8
1,994,467	+				-1.4
1,994,468	-				+1.9
1,994,491	+				+0.4
1,994,491	+				+0.3
1,994,491	+				+0.4
1,994,492	-				+0.1
1,994,498	-				+0.2
1,994,794	-		Echvi_1699	0.13	-1.6
1,994,794	-		Echvi_1699	0.13	-1.6
1,994,857	+		Echvi_1699	0.15	+0.6
1,994,858	-		Echvi_1699	0.15	+0.0
1,994,858	-		Echvi_1699	0.15	+0.3
1,994,876	+		Echvi_1699	0.15	+0.4
1,994,876	+		Echvi_1699	0.15	-0.5
1,994,877	-		Echvi_1699	0.15	-0.8
1,994,892	-		Echvi_1699	0.16	+0.8
1,994,969	-		Echvi_1699	0.18	-0.3
1,995,089	-		Echvi_1699	0.21	+0.6
1,995,089	-		Echvi_1699	0.21	+0.5
1,995,118	-		Echvi_1699	0.22	+1.1
1,995,146	+		Echvi_1699	0.23	-0.5
1,995,146	+		Echvi_1699	0.23	+0.1
1,995,146	+		Echvi_1699	0.23	-2.6
1,995,147	-		Echvi_1699	0.23	-0.1
1,995,190	+		Echvi_1699	0.24	+0.5
1,995,196	+		Echvi_1699	0.25	+0.8
1,995,197	-		Echvi_1699	0.25	-0.7
1,995,197	-		Echvi_1699	0.25	-2.7
1,995,229	+		Echvi_1699	0.25	-0.2
1,995,229	+		Echvi_1699	0.25	-0.9
1,995,229	+		Echvi_1699	0.25	+0.8
1,995,230	-		Echvi_1699	0.26	-0.7
1,995,240	+		Echvi_1699	0.26	-0.3
1,995,241	-		Echvi_1699	0.26	-0.6
1,995,249	+		Echvi_1699	0.26	-1.0
1,995,250	-		Echvi_1699	0.26	-0.5
1,995,342	+		Echvi_1699	0.29	-1.3
1,995,347	+		Echvi_1699	0.29	+0.9
1,995,347	+		Echvi_1699	0.29	-1.0
1,995,348	-		Echvi_1699	0.29	-0.8
1,995,348	-		Echvi_1699	0.29	+1.3
1,995,356	-		Echvi_1699	0.29	+0.2
1,995,450	-		Echvi_1699	0.32	-0.1
1,995,450	-		Echvi_1699	0.32	-1.9
1,995,474	+		Echvi_1699	0.33	+0.9
1,995,535	-		Echvi_1699	0.34	-0.5
1,995,535	-		Echvi_1699	0.34	-0.1
1,995,549	+		Echvi_1699	0.35	-0.7
1,995,550	-		Echvi_1699	0.35	+1.2
1,995,550	-		Echvi_1699	0.35	+0.3
1,995,556	+		Echvi_1699	0.35	+1.1
1,995,591	+		Echvi_1699	0.36	+1.9
1,995,681	-		Echvi_1699	0.39	+0.1
1,995,785	-		Echvi_1699	0.42	-0.1
1,995,844	+		Echvi_1699	0.43	-1.0
1,995,872	+		Echvi_1699	0.44	-1.8
1,995,984	+		Echvi_1699	0.47	-0.7
1,995,988	+		Echvi_1699	0.47	-0.4
1,995,989	-		Echvi_1699	0.48	+0.3
1,996,050	+		Echvi_1699	0.49	-1.1
1,996,051	-		Echvi_1699	0.49	-0.5
1,996,051	-		Echvi_1699	0.49	-1.6
1,996,114	-		Echvi_1699	0.51	-0.0
1,996,154	+		Echvi_1699	0.52	-0.4
1,996,155	-		Echvi_1699	0.52	+0.7
1,996,178	-		Echvi_1699	0.53	+0.0
1,996,211	+		Echvi_1699	0.54	-0.1
1,996,211	+		Echvi_1699	0.54	-0.3
1,996,211	+		Echvi_1699	0.54	+1.5
1,996,212	-		Echvi_1699	0.54	+0.3
1,996,212	-		Echvi_1699	0.54	+0.3
1,996,221	+		Echvi_1699	0.54	-1.3
1,996,265	+		Echvi_1699	0.56	+0.3
1,996,266	-		Echvi_1699	0.56	+0.8
1,996,266	-		Echvi_1699	0.56	+0.7
1,996,319	+		Echvi_1699	0.57	+0.8
1,996,320	-		Echvi_1699	0.57	+0.0
1,996,320	-		Echvi_1699	0.57	-0.5
1,996,324	+		Echvi_1699	0.57	+0.7
1,996,343	-		Echvi_1699	0.58	+0.3
1,996,343	-		Echvi_1699	0.58	-1.3
1,996,510	-		Echvi_1699	0.63	-0.1
1,996,533	-		Echvi_1699	0.63	-0.3
1,996,595	-		Echvi_1699	0.65	+1.5
1,996,663	-		Echvi_1699	0.67	+0.3
1,996,668	+		Echvi_1699	0.67	-0.4
1,996,668	+		Echvi_1699	0.67	+0.1
1,996,669	-		Echvi_1699	0.67	-1.4
1,996,675	+		Echvi_1699	0.67	+0.7
1,996,743	-		Echvi_1699	0.69	+0.5
1,996,809	+		Echvi_1699	0.71	-1.3
1,996,810	-		Echvi_1699	0.71	+0.1
1,996,815	-		Echvi_1699	0.71	-0.3
1,996,815	-		Echvi_1699	0.71	-0.1
1,996,819	+		Echvi_1699	0.72	-0.3
1,996,974	-		Echvi_1699	0.76	+0.3
1,997,243	+		Echvi_1699	0.84	-0.8
1,997,244	-		Echvi_1699	0.84	+0.5
1,997,244	-		Echvi_1699	0.84	-0.8
1,997,265	+		Echvi_1699	0.84	+0.2
1,997,266	-		Echvi_1699	0.85	-0.8
1,997,305	-		Echvi_1699	0.86	+0.2
1,997,308	+		Echvi_1699	0.86	-0.1
1,997,308	+		Echvi_1699	0.86	-0.6
1,997,309	-		Echvi_1699	0.86	-0.1
1,997,309	-		Echvi_1699	0.86	-0.7
1,997,309	-		Echvi_1699	0.86	-2.3
1,997,395	-		Echvi_1699	0.88	-0.3
1,997,430	+		Echvi_1699	0.89	-1.0
1,997,430	+		Echvi_1699	0.89	-1.8
1,997,431	-		Echvi_1699	0.89	-0.1
1,997,432	+		Echvi_1699	0.89	+0.5
1,997,432	+		Echvi_1699	0.89	-1.0
1,997,433	-		Echvi_1699	0.89	-0.2
1,997,592	-				-0.8
1,997,592	-				-1.2
1,997,703	+				-0.1
1,997,709	+				+1.3
1,997,714	+				-0.0
1,997,715	-				-0.8
1,997,775	-				-0.8
1,997,860	+				-1.4
1,997,861	-				-0.9
1,997,889	+				-0.5
1,997,890	-				-0.3
1,997,890	-				-1.0
1,997,892	+				+0.2
1,997,892	+				+0.5
1,997,901	-				-2.1
1,997,901	-				-0.5
1,997,903	+				-0.4
1,997,942	+				-0.1
1,997,943	-				+0.6
1,997,943	-				-0.2
1,997,943	-				+1.7
1,997,943	-				-0.3
1,997,943	-				-0.3
1,997,951	-				+0.8
1,997,967	+				-0.0
1,997,973	-				+0.1
1,998,018	-				-0.0
1,998,066	+				-0.6
1,998,066	+				-0.0
1,998,066	+				+0.3
1,998,067	-				-0.3
1,998,067	-				+0.4
1,998,096	+				-0.2
1,998,117	+				-1.2
1,998,118	-				-0.2
1,998,120	+		Echvi_1700	0.10	-1.3
1,998,121	-		Echvi_1700	0.10	+1.3
1,998,121	-		Echvi_1700	0.10	+1.3
1,998,121	-		Echvi_1700	0.10	-0.4
1,998,141	+		Echvi_1700	0.12	+0.5
1,998,142	-		Echvi_1700	0.12	+1.3
1,998,160	+		Echvi_1700	0.13	-0.9
1,998,161	-		Echvi_1700	0.13	+1.2
1,998,161	-		Echvi_1700	0.13	+0.1
1,998,275	+		Echvi_1700	0.21	-0.1
1,998,276	-		Echvi_1700	0.21	-0.3
1,998,296	+		Echvi_1700	0.22	-0.3
1,998,315	+		Echvi_1700	0.24	-0.4
1,998,356	+		Echvi_1700	0.27	+2.9
1,998,357	-		Echvi_1700	0.27	-0.8
1,998,501	+		Echvi_1700	0.37	-0.2
1,998,502	-		Echvi_1700	0.37	-1.0
1,998,560	+		Echvi_1700	0.41	-0.1
1,998,560	+		Echvi_1700	0.41	-0.9
1,998,561	-		Echvi_1700	0.41	+0.3
1,998,561	-		Echvi_1700	0.41	+1.1
1,998,587	+		Echvi_1700	0.43	+0.1
1,998,588	-		Echvi_1700	0.43	+0.9
1,998,588	-		Echvi_1700	0.43	-0.1
1,998,695	-		Echvi_1700	0.50	-0.8
1,998,729	+		Echvi_1700	0.53	+0.1
1,998,731	+		Echvi_1700	0.53	-0.4
1,998,731	+		Echvi_1700	0.53	+0.1
1,998,731	+		Echvi_1700	0.53	-0.3
1,998,732	-		Echvi_1700	0.53	-0.3
1,998,732	-		Echvi_1700	0.53	-0.3