Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1619

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,862,442	+		Echvi_1618	0.55	-0.3
1,862,442	+		Echvi_1618	0.55	+0.9
1,862,442	+		Echvi_1618	0.55	+0.0
1,862,443	-		Echvi_1618	0.55	-0.9
1,862,443	-		Echvi_1618	0.55	+0.1
1,862,468	+		Echvi_1618	0.58	+0.9
1,862,468	+		Echvi_1618	0.58	+0.3
1,862,468	+		Echvi_1618	0.58	-1.1
1,862,469	-		Echvi_1618	0.58	-0.2
1,862,472	+		Echvi_1618	0.58	+1.1
1,862,472	+		Echvi_1618	0.58	+0.5
1,862,473	-		Echvi_1618	0.58	+1.1
1,862,476	+		Echvi_1618	0.58	+0.4
1,862,477	-		Echvi_1618	0.58	-0.8
1,862,477	-		Echvi_1618	0.58	-0.1
1,862,477	-		Echvi_1618	0.58	-0.5
1,862,477	-		Echvi_1618	0.58	-1.7
1,862,477	-		Echvi_1618	0.58	+0.4
1,862,479	+		Echvi_1618	0.59	-0.2
1,862,479	+		Echvi_1618	0.59	+0.3
1,862,479	+		Echvi_1618	0.59	+1.1
1,862,479	+				+0.3
1,862,480	-		Echvi_1618	0.59	-0.1
1,862,517	+		Echvi_1618	0.62	+0.3
1,862,643	+		Echvi_1618	0.74	+0.3
1,862,643	+		Echvi_1618	0.74	+1.0
1,862,674	+		Echvi_1618	0.77	-1.6
1,862,674	+		Echvi_1618	0.77	-0.3
1,862,674	+		Echvi_1618	0.77	-0.5
1,862,674	+		Echvi_1618	0.77	+0.3
1,862,674	+		Echvi_1618	0.77	+0.7
1,862,675	-		Echvi_1618	0.77	-2.0
1,862,675	-		Echvi_1618	0.77	-0.2
1,862,675	-		Echvi_1618	0.77	+0.1
1,862,728	+		Echvi_1618	0.82	-0.5
1,862,728	+		Echvi_1618	0.82	-0.5
1,862,745	-		Echvi_1618	0.84	-0.4
1,862,759	-		Echvi_1618	0.85	-0.3
1,862,759	-		Echvi_1618	0.85	+0.6
1,862,761	+		Echvi_1618	0.86	-0.6
1,862,762	-		Echvi_1618	0.86	+0.6
1,862,762	-		Echvi_1618	0.86	+0.6
1,862,762	-		Echvi_1618	0.86	-0.4
1,862,809	-				+0.1
1,862,953	+				-0.2
1,862,966	-				+1.5
1,862,987	-				+0.3
1,863,172	-				-0.9
1,863,173	+				+0.6
1,863,174	-				+0.5
1,863,174	-				-1.9
1,863,244	+				-0.4
1,863,251	+				-0.8
1,863,252	-				-0.3
1,863,324	-				-0.1
1,863,389	-				+0.4
1,863,403	-				-0.7
1,863,444	+				-0.4
1,863,514	+				-0.3
1,863,515	-				-1.2
1,863,544	+				+0.2
1,863,748	+		Echvi_1619	0.11	+0.1
1,863,748	+		Echvi_1619	0.11	-0.1
1,863,749	-		Echvi_1619	0.11	-1.2
1,863,791	-		Echvi_1619	0.13	+0.4
1,863,921	+		Echvi_1619	0.17	-0.7
1,863,922	-		Echvi_1619	0.17	-1.2
1,864,002	+		Echvi_1619	0.20	-2.3
1,864,104	+		Echvi_1619	0.24	-1.0
1,864,174	+		Echvi_1619	0.26	-1.4
1,864,174	+		Echvi_1619	0.26	+0.4
1,864,175	-		Echvi_1619	0.26	+0.3
1,864,175	-		Echvi_1619	0.26	-0.2
1,864,175	-		Echvi_1619	0.26	+0.6
1,864,175	-		Echvi_1619	0.26	+0.6
1,864,175	-		Echvi_1619	0.26	+0.6
1,864,178	-		Echvi_1619	0.27	-1.0
1,864,287	+		Echvi_1619	0.30	+1.0
1,864,580	+		Echvi_1619	0.41	+0.3
1,864,580	+		Echvi_1619	0.41	-0.9
1,864,627	+		Echvi_1619	0.43	+0.4
1,864,638	-		Echvi_1619	0.43	+0.1
1,864,666	-		Echvi_1619	0.44	+1.3
1,864,685	+		Echvi_1619	0.45	-0.5
1,864,711	+		Echvi_1619	0.46	-0.7
1,864,712	-		Echvi_1619	0.46	+0.6
1,864,712	-		Echvi_1619	0.46	-3.0
1,864,724	-		Echvi_1619	0.46	-1.6
1,864,724	-		Echvi_1619	0.46	-0.0
1,864,782	-		Echvi_1619	0.48	+0.0
1,864,783	+				+1.9
1,864,847	-		Echvi_1619	0.51	-1.2
1,864,885	+		Echvi_1619	0.52	-0.1
1,864,900	+		Echvi_1619	0.52	+0.9
1,864,900	+		Echvi_1619	0.52	+0.1
1,864,901	-		Echvi_1619	0.52	-0.1
1,864,905	+		Echvi_1619	0.53	-1.5
1,864,905	+		Echvi_1619	0.53	-0.5
1,864,906	-		Echvi_1619	0.53	-0.4
1,864,906	-		Echvi_1619	0.53	+0.2
1,864,992	-		Echvi_1619	0.56	+0.3
1,865,123	-		Echvi_1619	0.60	+0.0
1,865,154	-		Echvi_1619	0.62	-0.2
1,865,158	-		Echvi_1619	0.62	+0.6
1,865,163	-		Echvi_1619	0.62	-0.7
1,865,163	-		Echvi_1619	0.62	+1.3
1,865,167	+		Echvi_1619	0.62	-1.7
1,865,167	+		Echvi_1619	0.62	+0.2
1,865,167	+		Echvi_1619	0.62	-0.7
1,865,168	-				+1.5
1,865,219	+		Echvi_1619	0.64	-1.6
1,865,353	+		Echvi_1619	0.69	+0.3
1,865,353	+		Echvi_1619	0.69	-0.8
1,865,369	-		Echvi_1619	0.69	+0.8
1,865,414	+		Echvi_1619	0.71	+0.3
1,865,424	+		Echvi_1619	0.71	-1.1
1,865,425	-		Echvi_1619	0.71	-0.7
1,865,500	+		Echvi_1619	0.74	+0.2
1,865,593	+		Echvi_1619	0.77	+0.2
1,865,593	+		Echvi_1619	0.77	+1.4
1,865,593	+		Echvi_1619	0.77	+0.5
1,865,594	-		Echvi_1619	0.77	-0.3
1,865,594	-		Echvi_1619	0.77	+0.1
1,865,807	+		Echvi_1619	0.85	-0.3
1,865,899	-		Echvi_1619	0.88	-0.4
1,865,903	+		Echvi_1619	0.88	+0.1
1,865,903	+		Echvi_1619	0.88	+0.0
1,865,909	+		Echvi_1619	0.89	-0.1
1,865,911	+		Echvi_1619	0.89	-1.2
1,865,911	+		Echvi_1619	0.89	+0.2
1,865,912	-		Echvi_1619	0.89	+0.0
1,865,917	-		Echvi_1619	0.89	-0.2
1,865,981	-				-0.1
1,866,022	+				-0.2
1,866,022	+				-1.2
1,866,023	-				+0.1
1,866,037	+				-0.0
1,866,037	+				-1.2
1,866,267	-				+1.3
1,866,300	-				-0.2
1,866,300	-				-0.8
1,866,300	-				-0.1
1,866,300	-				+0.6
1,866,303	-				+0.4
1,866,322	-				-1.4
1,866,328	+				-0.3
1,866,328	+				+0.7
1,866,329	-				+0.3
1,866,329	-				-2.7
1,866,354	-		Echvi_1620	0.11	-0.1
1,866,382	+		Echvi_1620	0.20	-0.1
1,866,396	+		Echvi_1620	0.24	-0.5
1,866,396	+		Echvi_1620	0.24	-1.2
1,866,396	+		Echvi_1620	0.24	+0.6
1,866,397	-		Echvi_1620	0.24	-0.7
1,866,397	-		Echvi_1620	0.24	+0.3
1,866,424	+		Echvi_1620	0.33	-1.4
1,866,427	+		Echvi_1620	0.34	-0.9
1,866,477	-		Echvi_1620	0.50	-1.0
1,866,477	-		Echvi_1620	0.50	-0.7
1,866,501	+		Echvi_1620	0.57	-0.7
1,866,501	+		Echvi_1620	0.57	-0.3
1,866,501	+		Echvi_1620	0.57	-1.2
1,866,502	-		Echvi_1620	0.58	+1.3
1,866,505	+		Echvi_1620	0.59	-0.3
1,866,506	-		Echvi_1620	0.59	+0.1
1,866,510	+		Echvi_1620	0.60	+0.3
1,866,511	-		Echvi_1620	0.61	+1.3
1,866,557	+		Echvi_1620	0.75	+0.3
1,866,580	-		Echvi_1620	0.83	+1.9
1,866,602	+		Echvi_1620	0.90	+0.3
1,866,647	-				-0.9
1,866,647	-				-0.2
1,866,647	-				-1.4
1,866,654	+				-0.6
1,866,661	+				-0.2
1,866,670	+				-1.0
1,866,684	+				-0.2
1,866,691	+				+2.3
1,866,705	+				-0.9
1,866,705	+				+0.8
1,866,785	+				-0.8
1,866,818	-				-0.2
1,866,861	+				-0.9
1,866,861	+				-0.7
1,866,862	-				-0.3
1,866,862	-				+0.0
1,866,862	-				-0.7
1,866,891	-				-0.1
1,867,013	-				-1.0
1,867,084	+				-0.3
1,867,084	+				-1.1
1,867,085	-				-0.1
1,867,182	+				+1.1
1,867,183	-				-1.7
1,867,183	-				-0.4
1,867,209	-				-0.2