Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1003

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,160,864	+		Echvi_1001	0.41	-0.9
1,160,864	+		Echvi_1001	0.41	-0.7
1,160,903	-		Echvi_1001	0.50	-0.1
1,160,903	-		Echvi_1001	0.50	-0.2
1,160,903	-		Echvi_1001	0.50	+0.4
1,160,953	-		Echvi_1001	0.60	+0.4
1,160,957	+		Echvi_1001	0.61	+0.3
1,160,958	-		Echvi_1001	0.62	+0.2
1,161,010	+		Echvi_1001	0.73	+1.8
1,161,011	-		Echvi_1001	0.73	+0.4
1,161,011	-		Echvi_1001	0.73	-0.3
1,161,081	+		Echvi_1001	0.88	+2.4
1,161,081	+		Echvi_1001	0.88	-0.1
1,161,081	+		Echvi_1001	0.88	+1.8
1,161,081	+		Echvi_1001	0.88	+0.7
1,161,081	+		Echvi_1001	0.88	-0.5
1,161,081	+		Echvi_1001	0.88	+0.4
1,161,082	-		Echvi_1001	0.88	+0.5
1,161,082	-		Echvi_1001	0.88	+0.2
1,161,082	-		Echvi_1001	0.88	-0.3
1,161,087	+		Echvi_1001	0.89	-0.2
1,161,087	+		Echvi_1001	0.89	+0.3
1,161,088	-		Echvi_1001	0.89	-0.3
1,161,091	+				+0.7
1,161,091	+				+0.1
1,161,092	-				-0.4
1,161,092	-				+0.1
1,161,092	-				-0.7
1,161,092	-				+0.9
1,161,112	+				+0.5
1,161,112	+				+3.0
1,161,112	+				-1.2
1,161,112	+				-0.1
1,161,113	-				+0.4
1,161,113	-				+1.4
1,161,139	+				+1.0
1,161,139	+				-0.5
1,161,139	+				+1.3
1,161,201	+				+1.5
1,161,202	-				+0.4
1,161,205	+				-1.2
1,161,206	-				-0.6
1,161,206	-				+0.8
1,161,206	-				-0.8
1,161,215	-		Echvi_1002	0.10	+0.6
1,161,215	-		Echvi_1002	0.10	+0.0
1,161,237	+		Echvi_1002	0.14	+2.7
1,161,237	+		Echvi_1002	0.14	-0.6
1,161,237	+		Echvi_1002	0.14	+0.5
1,161,237	+		Echvi_1002	0.14	-0.4
1,161,237	+		Echvi_1002	0.14	-1.2
1,161,238	-		Echvi_1002	0.14	+0.0
1,161,238	-		Echvi_1002	0.14	-1.0
1,161,238	-		Echvi_1002	0.14	-0.2
1,161,257	+		Echvi_1002	0.17	+0.6
1,161,257	+		Echvi_1002	0.17	-1.1
1,161,258	-		Echvi_1002	0.17	-0.0
1,161,258	-		Echvi_1002	0.17	-0.1
1,161,259	+		Echvi_1002	0.17	-0.7
1,161,260	-		Echvi_1002	0.17	-0.4
1,161,291	+		Echvi_1002	0.22	-0.2
1,161,291	+		Echvi_1002	0.22	+0.3
1,161,291	+		Echvi_1002	0.22	+0.1
1,161,291	+		Echvi_1002	0.22	+1.0
1,161,292	-		Echvi_1002	0.22	+1.4
1,161,292	-		Echvi_1002	0.22	-0.3
1,161,292	-		Echvi_1002	0.22	-0.1
1,161,304	+		Echvi_1002	0.24	-0.2
1,161,304	+		Echvi_1002	0.24	+1.0
1,161,317	-		Echvi_1002	0.26	-2.2
1,161,357	+		Echvi_1002	0.33	-1.1
1,161,357	+		Echvi_1002	0.33	-1.2
1,161,358	-		Echvi_1002	0.33	+0.3
1,161,358	-		Echvi_1002	0.33	+2.0
1,161,358	-		Echvi_1002	0.33	+0.5
1,161,365	+		Echvi_1002	0.34	-0.1
1,161,366	-		Echvi_1002	0.34	+0.6
1,161,368	+		Echvi_1002	0.34	+0.4
1,161,369	-		Echvi_1002	0.34	+1.4
1,161,369	-		Echvi_1002	0.34	-1.2
1,161,395	+		Echvi_1002	0.38	+0.7
1,161,424	-		Echvi_1002	0.43	-0.3
1,161,565	+		Echvi_1002	0.65	-0.1
1,161,565	+		Echvi_1002	0.65	-0.6
1,161,565	+		Echvi_1002	0.65	+0.1
1,161,565	+		Echvi_1002	0.65	-1.6
1,161,566	-		Echvi_1002	0.65	+0.7
1,161,566	-		Echvi_1002	0.65	+0.4
1,161,566	-		Echvi_1002	0.65	+0.4
1,161,566	-		Echvi_1002	0.65	-0.7
1,161,635	-		Echvi_1002	0.76	+0.5
1,161,664	+				+2.0
1,161,664	+		Echvi_1002	0.81	-0.3
1,161,665	-		Echvi_1002	0.81	+1.2
1,161,665	-		Echvi_1002	0.81	-0.8
1,161,665	-		Echvi_1002	0.81	-0.5
1,161,665	-		Echvi_1002	0.81	-0.2
1,161,668	+		Echvi_1002	0.81	+0.1
1,161,668	+		Echvi_1002	0.81	+0.0
1,161,668	+		Echvi_1002	0.81	-1.3
1,161,669	-		Echvi_1002	0.81	-0.0
1,161,669	-		Echvi_1002	0.81	+0.4
1,161,669	-		Echvi_1002	0.81	-0.5
1,161,752	+				-0.1
1,161,753	-				-0.3
1,161,753	-				+0.4
1,161,755	+				+0.0
1,161,755	+				+0.2
1,161,755	+				+0.2
1,161,755	+				-0.2
1,161,755	+				-1.2
1,161,755	+				+0.6
1,161,755	+				+0.0
1,161,755	+				-0.2
1,161,756	-				-0.2
1,161,756	-				-1.0
1,161,756	-				-0.9
1,161,756	-				-0.7
1,161,759	+				-0.2
1,161,759	+				-2.1
1,161,759	+				-0.1
1,161,760	-				+0.8
1,161,760	-				-0.7
1,161,830	+				+0.9
1,161,830	+				-0.7
1,161,831	-				-0.4
1,161,831	-				-0.9
1,161,860	+				+0.3
1,161,860	+				+0.7
1,161,861	-				+0.8
1,161,874	+				-0.6
1,161,899	+		Echvi_1003	0.11	-0.6
1,161,927	+		Echvi_1003	0.14	-0.9
1,161,927	+		Echvi_1003	0.14	-2.2
1,161,933	+		Echvi_1003	0.14	+0.0
1,161,934	-		Echvi_1003	0.14	-1.1
1,161,936	-		Echvi_1003	0.15	-0.7
1,161,941	+		Echvi_1003	0.15	+0.1
1,161,941	+		Echvi_1003	0.15	-0.4
1,161,941	+		Echvi_1003	0.15	+2.0
1,161,941	+		Echvi_1003	0.15	-0.5
1,161,941	+		Echvi_1003	0.15	-0.7
1,161,942	-		Echvi_1003	0.15	+0.4
1,161,961	+		Echvi_1003	0.17	-1.3
1,161,961	+		Echvi_1003	0.17	-0.4
1,161,961	+		Echvi_1003	0.17	-0.0
1,161,981	-		Echvi_1003	0.19	+0.9
1,161,985	+		Echvi_1003	0.19	-0.4
1,161,986	-		Echvi_1003	0.19	+0.1
1,161,986	-		Echvi_1003	0.19	+1.0
1,162,044	-		Echvi_1003	0.25	-0.9
1,162,111	+		Echvi_1003	0.31	-1.1
1,162,111	+		Echvi_1003	0.31	-0.9
1,162,111	+		Echvi_1003	0.31	-0.4
1,162,111	+		Echvi_1003	0.31	-1.1
1,162,112	-		Echvi_1003	0.31	-1.3
1,162,112	-		Echvi_1003	0.31	+0.0
1,162,112	-		Echvi_1003	0.31	-0.1
1,162,112	-		Echvi_1003	0.31	-1.5
1,162,112	-		Echvi_1003	0.31	+0.4
1,162,198	+		Echvi_1003	0.40	-0.3
1,162,256	-		Echvi_1003	0.45	+0.2
1,162,256	-		Echvi_1003	0.45	-0.8
1,162,270	-		Echvi_1003	0.47	-0.6
1,162,288	+		Echvi_1003	0.48	+1.4
1,162,289	-		Echvi_1003	0.48	-0.9
1,162,355	-		Echvi_1003	0.55	-0.6
1,162,427	-		Echvi_1003	0.62	+0.1
1,162,440	+		Echvi_1003	0.63	-0.2
1,162,506	-		Echvi_1003	0.69	+1.6
1,162,566	-		Echvi_1003	0.75	-0.8
1,162,570	+		Echvi_1003	0.75	-0.8
1,162,587	+		Echvi_1003	0.77	+0.1
1,162,587	+		Echvi_1003	0.77	-0.5
1,162,588	-		Echvi_1003	0.77	-0.4
1,162,627	+		Echvi_1003	0.81	+2.0
1,162,628	-		Echvi_1003	0.81	+0.5
1,162,754	+				-0.7
1,162,803	+				-1.5
1,162,889	+				-1.3
1,162,906	-				-0.3
1,162,909	-				+0.8
1,162,924	-				-0.5
1,162,933	+				+0.1
1,162,947	+				+0.6
1,162,982	-				-0.6
1,162,984	+				-0.9
1,162,984	+				-0.6
1,162,984	+				-0.1
1,163,032	+				-0.2
1,163,033	-				+0.5
1,163,036	+				-0.8
1,163,036	+				+1.6
1,163,036	+				+0.5
1,163,036	+				+0.3
1,163,037	-				-0.3
1,163,037	-				-0.2
1,163,039	-				-0.7
1,163,044	+				+0.2
1,163,044	+				-1.7
1,163,059	+				-1.2
1,163,059	+				-0.6
1,163,059	+				-0.2
1,163,059	+				+0.5
1,163,059	+				+0.1
1,163,059	+				+0.7
1,163,059	+				+0.1
1,163,059	+				-1.5
1,163,060	-				-0.2
1,163,060	-				-1.0
1,163,060	-				-2.5
1,163,060	-				+0.9
1,163,060	-				-0.6
1,163,060	-				-0.3
1,163,064	+				+1.4
1,163,065	-				-1.3
1,163,065	-				+1.2
1,163,065	-				+1.3
1,163,082	+				+0.2
1,163,083	-				+0.2
1,163,129	+				-0.2
1,163,132	-				+0.7
1,163,201	-		Echvi_1004	0.11	+1.4
1,163,215	+		Echvi_1004	0.12	-0.8
1,163,215	+		Echvi_1004	0.12	+0.7
1,163,215	+		Echvi_1004	0.12	+1.0
1,163,215	+		Echvi_1004	0.12	-0.5
1,163,216	-		Echvi_1004	0.12	-1.2
1,163,216	-		Echvi_1004	0.12	-1.1
1,163,277	+		Echvi_1004	0.14	-1.9
1,163,278	-		Echvi_1004	0.14	+0.3
1,163,351	-		Echvi_1004	0.18	-0.4
1,163,363	-		Echvi_1004	0.18	+0.5
1,163,369	+		Echvi_1004	0.18	-0.8
1,163,384	+		Echvi_1004	0.19	-0.1
1,163,400	+		Echvi_1004	0.20	-1.1
1,163,401	-		Echvi_1004	0.20	+0.4
1,163,401	-		Echvi_1004	0.20	-0.3
1,163,402	+		Echvi_1004	0.20	-1.1
1,163,402	+		Echvi_1004	0.20	+0.4
1,163,403	-		Echvi_1004	0.20	+0.2
1,163,423	+		Echvi_1004	0.21	-0.6
1,163,494	+		Echvi_1004	0.24	+0.1
1,163,494	+		Echvi_1004	0.24	+0.9
1,163,495	-		Echvi_1004	0.24	+0.2
1,163,510	+		Echvi_1004	0.24	+0.7
1,163,541	-		Echvi_1004	0.26	+0.6
1,163,543	-		Echvi_1004	0.26	+1.2
1,163,543	-		Echvi_1004	0.26	-0.2
1,163,551	+		Echvi_1004	0.26	+0.9
1,163,552	-		Echvi_1004	0.26	+1.4
1,163,569	+		Echvi_1004	0.27	+0.2
1,163,569	+		Echvi_1004	0.27	+1.0
1,163,573	+		Echvi_1004	0.27	-0.1
1,163,573	+		Echvi_1004	0.27	-0.4
1,163,574	-		Echvi_1004	0.27	-0.3
1,163,574	-		Echvi_1004	0.27	+1.0
1,163,574	-		Echvi_1004	0.27	+0.6
1,163,574	-		Echvi_1004	0.27	-0.5
1,163,574	-		Echvi_1004	0.27	-0.0
1,163,612	+		Echvi_1004	0.28	+0.5
1,163,612	+		Echvi_1004	0.28	-0.3
1,163,612	+		Echvi_1004	0.28	-0.9
1,163,613	-		Echvi_1004	0.29	-1.0
1,163,645	+		Echvi_1004	0.30	+0.2
1,163,645	+		Echvi_1004	0.30	+0.4
1,163,695	+		Echvi_1004	0.32	-0.5
1,163,695	+		Echvi_1004	0.32	+1.4
1,163,696	-		Echvi_1004	0.32	-0.2
1,163,696	-		Echvi_1004	0.32	-0.3
1,163,732	-		Echvi_1004	0.34	+0.8
1,163,732	-		Echvi_1004	0.34	-0.5
1,163,735	+		Echvi_1004	0.34	-0.1
1,163,735	+		Echvi_1004	0.34	+0.0
1,163,735	+		Echvi_1004	0.34	-0.6
1,163,736	-		Echvi_1004	0.34	-0.1
1,163,764	+		Echvi_1004	0.35	+0.3
1,163,764	+		Echvi_1004	0.35	-0.6
1,163,764	+		Echvi_1004	0.35	+0.0
1,163,765	-		Echvi_1004	0.35	-0.1
1,163,765	-		Echvi_1004	0.35	+0.3
1,163,810	+		Echvi_1004	0.37	+0.2
1,163,810	+		Echvi_1004	0.37	+0.3
1,163,811	-		Echvi_1004	0.37	+0.6