Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4612

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,519,831	-				+1.0
5,519,856	-		Echvi_4611	0.21	+1.6
5,519,858	-		Echvi_4611	0.22	-0.6
5,519,967	-		Echvi_4611	0.66	+1.0
5,519,967	-		Echvi_4611	0.66	+2.0
5,520,159	+				-0.1
5,520,169	+				-2.2
5,520,211	+				+0.8
5,520,211	+				-0.5
5,520,212	-				-0.1
5,520,227	+		Echvi_4612	0.12	-1.4
5,520,227	+		Echvi_4612	0.12	+1.0
5,520,227	+		Echvi_4612	0.12	+0.7
5,520,227	+		Echvi_4612	0.12	-1.0
5,520,228	-		Echvi_4612	0.12	+2.3
5,520,228	-		Echvi_4612	0.12	+0.3
5,520,228	-		Echvi_4612	0.12	+0.7
5,520,229	+		Echvi_4612	0.12	-0.7
5,520,251	-		Echvi_4612	0.14	+0.3
5,520,307	+		Echvi_4612	0.21	+0.4
5,520,310	+		Echvi_4612	0.21	-0.4
5,520,310	+		Echvi_4612	0.21	+0.4
5,520,310	+		Echvi_4612	0.21	+0.6
5,520,310	+		Echvi_4612	0.21	+1.8
5,520,310	+		Echvi_4612	0.21	+1.4
5,520,327	+		Echvi_4612	0.23	+2.5
5,520,327	+		Echvi_4612	0.23	-0.9
5,520,327	+		Echvi_4612	0.23	+1.0
5,520,328	-		Echvi_4612	0.23	-1.9
5,520,329	+		Echvi_4612	0.24	+0.5
5,520,329	+		Echvi_4612	0.24	-0.0
5,520,329	+		Echvi_4612	0.24	+0.8
5,520,329	+		Echvi_4612	0.24	-0.5
5,520,330	-		Echvi_4612	0.24	-0.2
5,520,330	-		Echvi_4612	0.24	+0.4
5,520,340	+		Echvi_4612	0.25	+1.3
5,520,374	+		Echvi_4612	0.29	+1.3
5,520,375	-		Echvi_4612	0.29	+0.6
5,520,459	-		Echvi_4612	0.39	+0.7
5,520,487	+		Echvi_4612	0.42	+0.2
5,520,498	+		Echvi_4612	0.43	+0.8
5,520,498	+		Echvi_4612	0.43	+0.0
5,520,499	-		Echvi_4612	0.44	-0.0
5,520,517	+		Echvi_4612	0.46	+0.1
5,520,525	+		Echvi_4612	0.47	+0.6
5,520,544	+		Echvi_4612	0.49	+0.5
5,520,582	+		Echvi_4612	0.53	-1.6
5,520,619	+		Echvi_4612	0.58	-2.4
5,520,619	+		Echvi_4612	0.58	+0.6
5,520,620	-		Echvi_4612	0.58	-0.4
5,520,620	-		Echvi_4612	0.58	+0.1
5,520,787	+		Echvi_4612	0.78	+1.3
5,520,958	+				+0.4
5,520,958	+				+0.7
5,520,959	-				+0.1
5,520,959	-				-0.9
5,520,986	+				+0.4
5,521,096	-		Echvi_4613	0.59	+0.2
5,521,198	+				+1.6
5,521,199	-				+0.4
5,521,204	+				-0.6
5,521,205	-				-0.4
5,521,216	+				-1.0
5,521,216	+				+0.8
5,521,246	-		Echvi_4614	0.12	-2.4
5,521,247	+		Echvi_4614	0.12	+0.7
5,521,248	-		Echvi_4614	0.12	+0.4
5,521,248	-		Echvi_4614	0.12	+0.6
5,521,248	-		Echvi_4614	0.12	+0.5
5,521,288	+		Echvi_4614	0.21	-0.2
5,521,288	+		Echvi_4614	0.21	-1.9
5,521,288	+		Echvi_4614	0.21	+0.5
5,521,289	-		Echvi_4614	0.22	-0.0
5,521,289	-		Echvi_4614	0.22	+2.5
5,521,290	+		Echvi_4614	0.22	+0.5
5,521,290	+		Echvi_4614	0.22	-0.8
5,521,291	-		Echvi_4614	0.22	+1.4
5,521,291	-		Echvi_4614	0.22	-2.2
5,521,293	+		Echvi_4614	0.23	-0.6
5,521,293	+		Echvi_4614	0.23	+2.0
5,521,293	+		Echvi_4614	0.23	+0.5
5,521,294	-		Echvi_4614	0.23	-0.7
5,521,295	+		Echvi_4614	0.23	-0.3
5,521,298	+		Echvi_4614	0.24	-0.2
5,521,298	+		Echvi_4614	0.24	+1.3
5,521,301	+		Echvi_4614	0.24	+1.9
5,521,301	+		Echvi_4614	0.24	+0.7
5,521,331	+		Echvi_4614	0.31	+0.0
5,521,335	+		Echvi_4614	0.32	+1.0
5,521,340	+		Echvi_4614	0.33	+2.0
5,521,340	+		Echvi_4614	0.33	-1.1
5,521,340	+		Echvi_4614	0.33	+1.3
5,521,340	+		Echvi_4614	0.33	+2.2
5,521,344	+		Echvi_4614	0.34	+0.5
5,521,372	-		Echvi_4614	0.41	-0.2
5,521,413	+		Echvi_4614	0.50	-0.4
5,521,413	+		Echvi_4614	0.50	+0.2
5,521,422	+		Echvi_4614	0.52	-0.4
5,521,423	-		Echvi_4614	0.52	+1.4
5,521,423	-				+0.4
5,521,423	-		Echvi_4614	0.52	+0.3
5,521,423	-		Echvi_4614	0.52	-0.3
5,521,425	-		Echvi_4614	0.53	-0.1
5,521,425	-		Echvi_4614	0.53	+0.9
5,521,443	+		Echvi_4614	0.57	+1.3
5,521,444	-		Echvi_4614	0.57	+1.0
5,521,444	-		Echvi_4614	0.57	+0.2
5,521,445	+		Echvi_4614	0.57	-0.4
5,521,446	-		Echvi_4614	0.58	+0.5
5,521,446	-		Echvi_4614	0.58	-2.6
5,521,464	+		Echvi_4614	0.62	+0.8
5,521,482	+		Echvi_4614	0.66	-1.3
5,521,482	+		Echvi_4614	0.66	+1.4
5,521,484	+		Echvi_4614	0.66	+0.4
5,521,485	-		Echvi_4614	0.67	+0.1
5,521,503	+		Echvi_4614	0.71	-0.3
5,521,525	+		Echvi_4614	0.76	+0.0
5,521,634	-				+0.8
5,521,663	+				+1.5
5,521,742	+				-0.8
5,521,760	+				+0.2
5,521,761	-				-1.0
5,521,763	-				-2.5
5,521,816	+				+1.4
5,521,829	-				-0.7
5,521,829	-				+1.0
5,521,849	+				+0.6
5,521,849	+				+0.3
5,521,849	+				-0.2
5,521,849	+				+0.1
5,521,850	-				-0.1
5,521,850	-				+1.0
5,521,850	-				+1.0
5,521,850	-				-0.1
5,521,891	-		Echvi_4615	0.11	+0.4
5,521,891	-		Echvi_4615	0.11	-0.4
5,521,921	+		Echvi_4615	0.13	-1.5