Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4556

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,453,344	+				-1.8
5,453,344	+				+0.4
5,453,344	+				-1.0
5,453,358	+				+1.1
5,453,382	+				-1.6
5,453,407	-				-0.3
5,453,407	-				+0.6
5,453,410	-				-0.2
5,453,554	+		Echvi_4555	0.24	+0.2
5,453,555	-		Echvi_4555	0.24	+1.1
5,453,556	+		Echvi_4555	0.24	-1.6
5,453,556	+		Echvi_4555	0.24	-1.2
5,453,556	+		Echvi_4555	0.24	-1.3
5,453,557	-		Echvi_4555	0.24	-0.9
5,453,581	+		Echvi_4555	0.27	-1.4
5,453,654	+		Echvi_4555	0.37	-1.0
5,453,665	+		Echvi_4555	0.38	-0.6
5,453,665	+		Echvi_4555	0.38	-0.8
5,453,666	-		Echvi_4555	0.38	-0.0
5,453,666	-		Echvi_4555	0.38	+0.4
5,453,669	+		Echvi_4555	0.39	+1.1
5,453,669	+		Echvi_4555	0.39	-0.3
5,453,669	+		Echvi_4555	0.39	+1.2
5,453,669	+		Echvi_4555	0.39	+0.8
5,453,669	+		Echvi_4555	0.39	+0.2
5,453,670	-		Echvi_4555	0.39	+0.4
5,453,670	-		Echvi_4555	0.39	-0.4
5,453,670	-		Echvi_4555	0.39	+0.5
5,453,670	-		Echvi_4555	0.39	+0.2
5,453,670	-		Echvi_4555	0.39	+0.5
5,453,670	-		Echvi_4555	0.39	+0.7
5,453,670	-		Echvi_4555	0.39	+0.1
5,453,670	-		Echvi_4555	0.39	+0.3
5,453,670	-		Echvi_4555	0.39	-0.0
5,453,703	+		Echvi_4555	0.43	-0.6
5,453,704	-		Echvi_4555	0.43	+0.2
5,453,704	-		Echvi_4555	0.43	-0.1
5,453,704	-		Echvi_4555	0.43	+0.2
5,453,704	-		Echvi_4555	0.43	-0.1
5,453,735	+		Echvi_4555	0.47	-0.8
5,453,736	-		Echvi_4555	0.47	+0.5
5,453,742	+		Echvi_4555	0.48	-0.4
5,453,745	+		Echvi_4555	0.48	-1.4
5,453,746	-		Echvi_4555	0.49	+1.3
5,453,872	-		Echvi_4555	0.65	+0.6
5,453,872	-		Echvi_4555	0.65	-1.5
5,453,872	-		Echvi_4555	0.65	+1.7
5,453,905	+		Echvi_4555	0.69	+0.5
5,453,905	+		Echvi_4555	0.69	-1.3
5,453,906	-		Echvi_4555	0.69	-0.6
5,453,979	+		Echvi_4555	0.79	-2.1
5,453,979	+		Echvi_4555	0.79	-1.4
5,454,028	+		Echvi_4555	0.85	-0.2
5,454,029	-		Echvi_4555	0.85	+2.0
5,454,029	-		Echvi_4555	0.85	+1.0
5,454,029	-		Echvi_4555	0.85	+1.0
5,454,030	+		Echvi_4555	0.85	-0.8
5,454,030	+		Echvi_4555	0.85	+0.5
5,454,030	+		Echvi_4555	0.85	-2.7
5,454,030	+		Echvi_4555	0.85	+0.8
5,454,031	-		Echvi_4555	0.85	+2.0
5,454,031	-		Echvi_4555	0.85	-0.6
5,454,031	-		Echvi_4555	0.85	+0.0
5,454,062	+		Echvi_4555	0.89	-1.3
5,454,062	+		Echvi_4555	0.89	-1.2
5,454,062	+		Echvi_4555	0.89	-1.9
5,454,063	-		Echvi_4555	0.90	-1.3
5,454,073	-				+0.2
5,454,097	+				+1.2
5,454,098	-				+2.2
5,454,098	-				-0.6
5,454,129	+				-0.0
5,454,158	+				+0.3
5,454,159	-				-1.7
5,454,170	-				+0.8
5,454,241	-				+0.3
5,454,241	-				-0.4
5,454,298	+				+0.4
5,454,298	+				-0.7
5,454,318	+				+1.0
5,454,330	+				-0.8
5,454,359	-				+1.0
5,454,553	+		Echvi_4556	0.17	-0.2
5,454,553	+		Echvi_4556	0.17	+0.4
5,454,554	-		Echvi_4556	0.17	+0.5
5,454,554	-		Echvi_4556	0.17	-0.0
5,454,554	-		Echvi_4556	0.17	-0.4
5,454,580	+		Echvi_4556	0.19	+0.6
5,454,581	-		Echvi_4556	0.19	+0.0
5,454,629	+		Echvi_4556	0.23	+0.3
5,454,744	+		Echvi_4556	0.31	+0.7
5,454,770	+		Echvi_4556	0.33	+1.4
5,454,771	-		Echvi_4556	0.34	+0.4
5,454,801	+		Echvi_4556	0.36	+1.0
5,454,934	+		Echvi_4556	0.46	-0.2
5,454,934	+		Echvi_4556	0.46	+0.3
5,454,934	+		Echvi_4556	0.46	+1.2
5,454,935	-		Echvi_4556	0.46	+2.0
5,454,935	-		Echvi_4556	0.46	+1.0
5,454,935	-		Echvi_4556	0.46	-0.4
5,455,269	+		Echvi_4556	0.72	-1.8
5,455,269	+		Echvi_4556	0.72	-1.0
5,455,270	-		Echvi_4556	0.72	-1.6
5,455,392	-		Echvi_4556	0.81	+1.4
5,455,445	+		Echvi_4556	0.86	-1.2
5,455,445	+		Echvi_4556	0.86	+0.8
5,455,445	+		Echvi_4556	0.86	-0.2
5,455,445	+		Echvi_4556	0.86	-0.0
5,455,446	-		Echvi_4556	0.86	-0.2
5,455,447	+		Echvi_4556	0.86	-0.8
5,455,448	-		Echvi_4556	0.86	-1.6
5,455,463	+		Echvi_4556	0.87	+0.7
5,455,538	+				+0.6
5,455,549	+				+1.0
5,455,549	+				-0.3
5,455,550	-				+2.2
5,455,550	-				-0.6
5,455,550	-				+1.0
5,455,581	+				+1.2
5,455,581	+				-1.1
5,455,582	-				+0.3
5,455,590	+				-0.3
5,455,591	-				-1.8
5,455,612	-				+0.4
5,455,620	+				-1.0
5,455,749	+				-2.1
5,455,781	+				+0.4
5,455,799	-				-1.0
5,455,891	+		Echvi_4557	0.16	+0.4
5,456,066	+		Echvi_4557	0.46	+0.2
5,456,067	-		Echvi_4557	0.46	+1.8
5,456,067	-		Echvi_4557	0.46	+0.3
5,456,069	-		Echvi_4557	0.46	-0.2
5,456,108	+		Echvi_4557	0.53	+0.6
5,456,133	+		Echvi_4557	0.57	+0.1
5,456,133	+		Echvi_4557	0.57	-0.3
5,456,134	-		Echvi_4557	0.57	+0.4
5,456,220	+		Echvi_4557	0.72	-0.2
5,456,220	+		Echvi_4557	0.72	+0.2
5,456,220	+		Echvi_4557	0.72	-0.2
5,456,220	+		Echvi_4557	0.72	+0.1
5,456,221	-		Echvi_4557	0.72	-0.2
5,456,221	-		Echvi_4557	0.72	+1.0
5,456,221	-		Echvi_4557	0.72	-1.7
5,456,221	-		Echvi_4557	0.72	-0.0
5,456,221	-		Echvi_4557	0.72	-0.7
5,456,221	-		Echvi_4557	0.72	-0.1
5,456,222	+		Echvi_4557	0.72	+0.4
5,456,241	+		Echvi_4557	0.76	+0.7
5,456,241	+		Echvi_4557	0.76	-0.1
5,456,242	-		Echvi_4557	0.76	+1.4
5,456,340	+				-0.1
5,456,341	-				-0.3
5,456,364	-				-0.2
5,456,381	+				-1.9
5,456,381	+				-1.4
5,456,382	-				-0.6