Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4479

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,357,195	-		Echvi_4478	0.78	-1.3
5,357,195	-		Echvi_4478	0.78	+0.4
5,357,195	-				+2.0
5,357,196	+		Echvi_4478	0.78	-0.2
5,357,298	+		Echvi_4478	0.80	+1.8
5,357,299	-		Echvi_4478	0.80	+2.0
5,357,299	-		Echvi_4478	0.80	-2.9
5,357,299	-		Echvi_4478	0.80	-1.7
5,357,390	-		Echvi_4478	0.82	-1.1
5,357,390	-		Echvi_4478	0.82	-0.1
5,357,419	+		Echvi_4478	0.83	-0.2
5,357,419	+		Echvi_4478	0.83	-1.2
5,357,420	-		Echvi_4478	0.83	-1.4
5,357,420	-		Echvi_4478	0.83	-0.5
5,357,452	+		Echvi_4478	0.84	+1.0
5,357,501	+		Echvi_4478	0.85	-0.6
5,357,502	-		Echvi_4478	0.85	+1.6
5,357,502	-		Echvi_4478	0.85	+0.4
5,357,502	-		Echvi_4478	0.85	-1.5
5,357,502	-		Echvi_4478	0.85	+0.6
5,357,523	+		Echvi_4478	0.85	+0.1
5,357,524	-		Echvi_4478	0.85	-0.8
5,357,524	-		Echvi_4478	0.85	+0.7
5,357,543	+		Echvi_4478	0.86	-0.1
5,357,543	+		Echvi_4478	0.86	-0.7
5,357,543	+		Echvi_4478	0.86	+0.1
5,357,543	+		Echvi_4478	0.86	-0.4
5,357,543	+		Echvi_4478	0.86	-1.8
5,357,543	+		Echvi_4478	0.86	+2.0
5,357,543	+		Echvi_4478	0.86	+0.0
5,357,544	-		Echvi_4478	0.86	-1.6
5,357,545	+		Echvi_4478	0.86	+0.1
5,357,545	+		Echvi_4478	0.86	+1.0
5,357,603	+		Echvi_4478	0.87	+1.2
5,357,614	-		Echvi_4478	0.87	-2.9
5,357,616	-		Echvi_4478	0.87	+0.7
5,357,632	+		Echvi_4478	0.88	-2.8
5,357,671	+		Echvi_4478	0.89	-0.3
5,357,672	-		Echvi_4478	0.89	+0.1
5,357,747	+				+0.1
5,357,754	-				-1.5
5,357,778	+				-1.9
5,357,796	+				+0.7
5,357,814	+				-0.2
5,357,814	+				+0.0
5,357,814	+				-0.2
5,357,864	+				-0.4
5,357,864	+				+0.8
5,357,865	-				+0.4
5,357,976	-				-1.3
5,357,992	+				+0.4
5,357,992	+				-0.0
5,357,993	-				+0.5
5,358,048	+				-2.8
5,358,049	-				-1.3
5,358,090	-				-0.0
5,358,146	-				-0.2
5,358,191	+				+1.5
5,358,194	+				-1.0
5,358,390	+				+0.2
5,358,477	+				-1.2
5,358,477	+				+1.5
5,358,477	+				+0.3
5,358,509	+				+0.1
5,358,509	+				-0.3
5,358,581	+				+1.6
5,358,582	-				-1.3
5,358,603	-				+1.0
5,358,682	+				+0.3
5,358,683	-				-1.1
5,358,704	-				-0.6
5,358,712	+				-0.4
5,358,716	+				+0.6
5,358,716	+				-0.0
5,358,746	-				+0.4
5,358,793	-				+2.0
5,358,793	-				-0.1
5,358,795	-				-0.1
5,358,800	+				-1.3
5,358,800	+				+0.6
5,358,800	+				+0.8
5,358,801	-				-0.2
5,358,801	-				+0.5
5,358,803	+				+0.1
5,358,808	-				-0.4
5,358,808	-				-0.7
5,358,832	+				+0.6
5,358,833	-				-0.1
5,358,835	-				-0.0
5,358,838	+				+0.1
5,358,839	-				-2.6
5,358,839	-				-1.7
5,358,839	-				-0.4
5,358,839	-				-1.0
5,358,839	-				-1.2
5,358,898	+				-0.6
5,358,898	+				-0.4
5,358,898	+				+0.7
5,359,007	+				+3.0
5,359,007	+				+2.0
5,359,008	-				-1.1
5,359,008	-				-0.6
5,359,008	-				-0.5
5,359,065	+				+0.2
5,359,069	-				-0.2
5,359,069	-				+0.6
5,359,181	-				-0.6
5,359,190	+				+0.9
5,359,220	+		Echvi_4480	0.16	-0.8
5,359,220	+		Echvi_4480	0.16	-0.5
5,359,220	+		Echvi_4480	0.16	+0.3
5,359,221	-		Echvi_4480	0.16	+1.0
5,359,224	+		Echvi_4480	0.17	-2.2
5,359,225	-		Echvi_4480	0.17	+0.2
5,359,225	-		Echvi_4480	0.17	+3.3
5,359,225	-		Echvi_4480	0.17	+0.3
5,359,272	-		Echvi_4480	0.27	+0.9