Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4457

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,333,020	+		Echvi_4456	0.51	-1.2
5,333,021	-		Echvi_4456	0.51	-1.3
5,333,021	-		Echvi_4456	0.51	-0.5
5,333,041	+		Echvi_4456	0.53	-1.8
5,333,057	+		Echvi_4456	0.54	+1.5
5,333,058	-		Echvi_4456	0.54	+0.7
5,333,073	+		Echvi_4456	0.55	-0.0
5,333,100	+		Echvi_4456	0.57	-0.6
5,333,100	+		Echvi_4456	0.57	-0.3
5,333,101	-		Echvi_4456	0.57	+0.6
5,333,101	-		Echvi_4456	0.57	+2.7
5,333,101	-		Echvi_4456	0.57	+0.3
5,333,125	+		Echvi_4456	0.59	-0.2
5,333,162	+		Echvi_4456	0.62	+0.6
5,333,193	-		Echvi_4456	0.64	+0.1
5,333,216	+		Echvi_4456	0.66	+0.7
5,333,441	-				+3.0
5,333,549	-				-0.1
5,333,561	-				+0.2
5,333,567	+				-0.1
5,333,567	+				-0.0
5,333,568	-				-0.7
5,333,568	-				-0.3
5,333,568	-				-0.9
5,333,569	+				-0.0
5,333,569	+				-0.3
5,333,569	+				-0.2
5,333,569	+				+1.4
5,333,569	+				-0.7
5,333,569	+				+2.0
5,333,569	+				+0.9
5,333,569	+				-0.2
5,333,570	-				+0.1
5,333,570	-				-0.2
5,333,570	-				-0.4
5,333,570	-				+1.0
5,333,580	+				-1.0
5,333,580	+				+0.7
5,333,581	-				-0.6
5,333,586	+				-2.2
5,333,587	-				-0.5
5,333,587	-				-1.3
5,333,652	-				+0.8
5,333,699	-				-0.2
5,333,699	-				+1.5
5,333,751	-				-1.0
5,333,869	+				-1.7
5,333,883	-				+0.4
5,333,901	+				+0.2
5,333,916	-				+1.4
5,333,918	-				+0.6
5,333,922	-				-0.8
5,333,942	+				+0.0
5,334,121	+				+0.3
5,334,121	+				+1.7
5,334,136	-				+1.1
5,334,223	+		Echvi_4457	0.14	+1.3
5,334,224	-		Echvi_4457	0.14	+2.0
5,334,354	+		Echvi_4457	0.21	+0.1
5,334,355	-		Echvi_4457	0.21	+0.4
5,334,358	+		Echvi_4457	0.21	+1.0
5,334,359	-		Echvi_4457	0.21	-0.2
5,334,359	-		Echvi_4457	0.21	+0.7
5,334,523	+		Echvi_4457	0.30	+0.7
5,334,537	+		Echvi_4457	0.30	+0.2
5,334,538	-		Echvi_4457	0.30	-1.3
5,334,567	+		Echvi_4457	0.32	-1.3
5,334,618	+		Echvi_4457	0.35	-0.5
5,334,619	-		Echvi_4457	0.35	+0.3
5,334,625	+		Echvi_4457	0.35	+0.7
5,334,703	-		Echvi_4457	0.39	+0.9
5,334,704	+		Echvi_4457	0.39	+1.2
5,334,705	-		Echvi_4457	0.39	-1.6
5,334,705	-		Echvi_4457	0.39	+0.5
5,334,741	+		Echvi_4457	0.41	+0.0
5,334,780	+		Echvi_4457	0.43	+0.1
5,334,780	+		Echvi_4457	0.43	+2.6
5,334,781	-		Echvi_4457	0.43	+1.7
5,334,783	+		Echvi_4457	0.43	+1.4
5,334,783	+		Echvi_4457	0.43	-0.6
5,334,783	+		Echvi_4457	0.43	-1.0
5,334,784	-		Echvi_4457	0.43	+1.0
5,334,784	-		Echvi_4457	0.43	-0.2
5,334,784	-		Echvi_4457	0.43	-1.2
5,334,854	-		Echvi_4457	0.47	-0.2
5,334,862	+		Echvi_4457	0.47	-0.2
5,334,863	-		Echvi_4457	0.47	-1.0
5,334,913	-		Echvi_4457	0.50	-0.2
5,334,953	-		Echvi_4457	0.52	+1.3
5,335,008	-		Echvi_4457	0.54	+0.5
5,335,047	-		Echvi_4457	0.56	-1.1
5,335,147	-		Echvi_4457	0.62	-0.9
5,335,272	+		Echvi_4457	0.68	-0.0
5,335,272	+		Echvi_4457	0.68	+0.6
5,335,305	+		Echvi_4457	0.70	-0.3
5,335,305	+		Echvi_4457	0.70	+0.2
5,335,366	+		Echvi_4457	0.73	+0.6
5,335,366	+		Echvi_4457	0.73	-0.0
5,335,372	+		Echvi_4457	0.73	-0.1
5,335,373	-		Echvi_4457	0.73	+3.1
5,335,373	-		Echvi_4457	0.73	+1.1
5,335,557	-		Echvi_4457	0.82	-0.4
5,335,589	-		Echvi_4457	0.84	+2.3
5,335,689	-		Echvi_4457	0.89	+0.0
5,335,882	-				+2.0
5,335,891	-				+0.4
5,335,899	+				+0.6
5,335,905	+				-1.3
5,335,914	+				-0.3
5,335,945	+				-0.9
5,335,976	-		Echvi_4458	0.10	+0.3
5,335,978	+		Echvi_4458	0.11	-0.3
5,335,978	+		Echvi_4458	0.11	+0.7
5,335,978	+		Echvi_4458	0.11	-0.6
5,335,979	-		Echvi_4458	0.11	+0.2
5,335,979	-		Echvi_4458	0.11	-0.1
5,336,067	+		Echvi_4458	0.25	+0.7
5,336,124	+		Echvi_4458	0.34	+1.5
5,336,160	+		Echvi_4458	0.40	+1.0
5,336,161	+		Echvi_4458	0.40	-1.1
5,336,161	+		Echvi_4458	0.40	+0.4
5,336,161	+		Echvi_4458	0.40	+0.1
5,336,161	+		Echvi_4458	0.40	+1.7
5,336,162	-		Echvi_4458	0.40	+0.8
5,336,165	+		Echvi_4458	0.41	-1.3
5,336,180	+		Echvi_4458	0.43	+0.1
5,336,181	-		Echvi_4458	0.43	-0.3
5,336,306	+		Echvi_4458	0.64	-0.2
5,336,306	+		Echvi_4458	0.64	-0.0
5,336,341	+		Echvi_4458	0.69	-0.8
5,336,393	-		Echvi_4458	0.78	-0.1
5,336,397	+		Echvi_4458	0.78	+0.1
5,336,421	+		Echvi_4458	0.82	+0.8
5,336,518	+				-0.5
5,336,532	+				-0.6
5,336,533	-				+0.0
5,336,533	-				+0.3
5,336,533	-				+1.0
5,336,533	-				-0.7
5,336,563	-				+1.0
5,336,563	-				-2.0
5,336,634	+		Echvi_4459	0.26	-0.1
5,336,635	-		Echvi_4459	0.26	+1.6
5,336,640	+		Echvi_4459	0.27	-0.0
5,336,686	-		Echvi_4459	0.40	-1.2
5,336,686	-		Echvi_4459	0.40	+0.4
5,336,846	+		Echvi_4459	0.86	-0.3
5,336,849	-		Echvi_4459	0.87	+1.6