Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4445

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,316,609	+				-0.0
5,316,609	+				+0.0
5,316,705	-				+0.6
5,316,750	-				-0.1
5,316,753	+				+0.5
5,316,757	+				+1.5
5,316,757	+				+1.1
5,316,758	-				+0.3
5,316,784	+				+0.4
5,316,784	+				-0.7
5,316,785	-				-0.8
5,316,789	+				+0.0
5,316,789	+				+4.0
5,316,796	+				-0.6
5,316,837	-				+0.3
5,316,837	-				+0.3
5,316,880	+				-0.1
5,316,890	+				+0.4
5,316,891	-				-0.2
5,316,895	-				-0.8
5,316,945	+		Echvi_4444	0.15	-0.4
5,316,945	+		Echvi_4444	0.15	-0.2
5,316,946	-		Echvi_4444	0.16	+0.5
5,316,946	-		Echvi_4444	0.16	-0.6
5,317,002	+		Echvi_4444	0.31	+0.6
5,317,034	-		Echvi_4444	0.40	-0.1
5,317,108	+		Echvi_4444	0.60	-1.3
5,317,108	+		Echvi_4444	0.60	+1.1
5,317,108	+		Echvi_4444	0.60	+0.4
5,317,108	+		Echvi_4444	0.60	+0.8
5,317,109	-		Echvi_4444	0.60	-1.2
5,317,134	+		Echvi_4444	0.67	+0.3
5,317,134	+		Echvi_4444	0.67	-0.6
5,317,134	+		Echvi_4444	0.67	+0.3
5,317,140	+		Echvi_4444	0.69	-0.3
5,317,154	+		Echvi_4444	0.72	-1.3
5,317,181	+		Echvi_4444	0.80	-0.1
5,317,203	-		Echvi_4444	0.86	-0.5
5,317,203	-		Echvi_4444	0.86	+1.1
5,317,211	+		Echvi_4444	0.88	-0.2
5,317,212	-		Echvi_4444	0.88	-0.4
5,317,212	-		Echvi_4444	0.88	-0.9
5,317,212	-		Echvi_4444	0.88	+0.9
5,317,255	-				+1.0
5,317,258	-				-0.6
5,317,258	-				+0.9
5,317,258	-				-0.2
5,317,288	+				+0.3
5,317,300	+				+0.2
5,317,319	+				-0.7
5,317,319	+				-0.4
5,317,319	+				-1.2
5,317,319	+				+1.3
5,317,319	+				+1.2
5,317,323	+				+0.5
5,317,347	+				+0.1
5,317,376	+				+2.3
5,317,377	-				+0.3
5,317,380	+				+1.0
5,317,380	+				-1.1
5,317,381	-				+0.1
5,317,383	-				-0.6
5,317,386	+				+0.7
5,317,387	-				-0.7
5,317,387	-				+0.2
5,317,393	+				+0.5
5,317,393	+				+0.4
5,317,393	+				+0.6
5,317,431	+				+0.6
5,317,432	-				+0.1
5,317,445	+				-0.0
5,317,449	+				-1.2
5,317,454	-				-0.5
5,317,454	-				+0.7
5,317,467	+				-0.2
5,317,481	+				-0.2
5,317,530	-				-1.7
5,317,534	+				+0.9
5,317,593	+				+0.5
5,317,608	+				+1.3
5,317,644	+				-0.0
5,317,652	+				-0.4
5,317,669	-				-0.2
5,317,690	-				+0.3
5,317,690	-				+1.4
5,317,762	+		Echvi_4445	0.13	+0.7
5,317,762	+		Echvi_4445	0.13	+2.2
5,317,762	+		Echvi_4445	0.13	-0.3
5,317,772	-		Echvi_4445	0.14	+0.5
5,317,772	-		Echvi_4445	0.14	-0.6
5,317,825	-		Echvi_4445	0.17	+0.0
5,317,834	-		Echvi_4445	0.18	+2.0
5,317,834	-		Echvi_4445	0.18	-0.6
5,317,834	-		Echvi_4445	0.18	+0.8
5,317,836	-		Echvi_4445	0.18	+0.4
5,317,836	-		Echvi_4445	0.18	-0.3
5,317,836	-		Echvi_4445	0.18	-1.0
5,317,949	+		Echvi_4445	0.24	+0.1
5,318,015	-		Echvi_4445	0.28	+0.7
5,318,015	-		Echvi_4445	0.28	-0.1
5,318,017	+		Echvi_4445	0.28	+0.9
5,318,018	-		Echvi_4445	0.28	-0.8
5,318,026	+		Echvi_4445	0.29	+0.1
5,318,026	+		Echvi_4445	0.29	+0.1
5,318,026	+		Echvi_4445	0.29	-0.2
5,318,027	-		Echvi_4445	0.29	+1.8
5,318,028	+		Echvi_4445	0.29	-1.2
5,318,028	+		Echvi_4445	0.29	+0.3
5,318,029	-		Echvi_4445	0.29	+0.8
5,318,029	-		Echvi_4445	0.29	+2.5
5,318,029	-		Echvi_4445	0.29	+0.6
5,318,054	-		Echvi_4445	0.30	-0.1
5,318,116	+		Echvi_4445	0.34	-0.8
5,318,117	-		Echvi_4445	0.34	-2.6
5,318,117	-		Echvi_4445	0.34	+0.4
5,318,117	-		Echvi_4445	0.34	-1.2
5,318,132	-		Echvi_4445	0.35	+0.4
5,318,179	+		Echvi_4445	0.37	+0.4
5,318,184	+		Echvi_4445	0.38	+0.7
5,318,195	+		Echvi_4445	0.38	-1.3
5,318,225	+		Echvi_4445	0.40	+0.7
5,318,245	+		Echvi_4445	0.41	-0.8
5,318,250	+		Echvi_4445	0.41	+0.4
5,318,250	+		Echvi_4445	0.41	+0.6
5,318,254	+		Echvi_4445	0.42	-1.2
5,318,263	-		Echvi_4445	0.42	-0.1
5,318,264	+		Echvi_4445	0.42	+0.2
5,318,293	-		Echvi_4445	0.44	+1.2
5,318,293	-		Echvi_4445	0.44	-0.2
5,318,296	-		Echvi_4445	0.44	+0.8
5,318,344	+		Echvi_4445	0.47	+0.1
5,318,372	+		Echvi_4445	0.48	+0.3
5,318,376	+		Echvi_4445	0.49	-0.0
5,318,376	+		Echvi_4445	0.49	-0.3
5,318,377	-		Echvi_4445	0.49	+1.0
5,318,527	-		Echvi_4445	0.57	-0.8
5,318,574	+		Echvi_4445	0.60	+0.8
5,318,656	+		Echvi_4445	0.65	+0.1
5,318,695	+		Echvi_4445	0.67	+1.3
5,318,740	-		Echvi_4445	0.69	-2.7
5,318,794	+		Echvi_4445	0.73	-1.2
5,318,807	-		Echvi_4445	0.73	-0.7
5,318,867	-		Echvi_4445	0.77	+0.1
5,318,874	-		Echvi_4445	0.77	-1.2
5,318,938	+		Echvi_4445	0.81	+0.5
5,318,938	+		Echvi_4445	0.81	+0.0
5,318,939	-		Echvi_4445	0.81	+0.3
5,318,941	+		Echvi_4445	0.81	-0.4
5,318,942	-		Echvi_4445	0.81	+1.1
5,318,980	+		Echvi_4445	0.83	-0.3
5,318,980	+		Echvi_4445	0.83	-0.5
5,318,980	+		Echvi_4445	0.83	+0.6
5,318,980	+		Echvi_4445	0.83	+2.4
5,318,980	+		Echvi_4445	0.83	+0.3
5,318,981	-		Echvi_4445	0.83	-1.1
5,318,981	-		Echvi_4445	0.83	-0.6
5,319,004	+		Echvi_4445	0.85	-0.3
5,319,004	+		Echvi_4445	0.85	+2.0
5,319,004	+				+2.6
5,319,004	+		Echvi_4445	0.85	+2.3
5,319,004	+		Echvi_4445	0.85	+0.1
5,319,004	+		Echvi_4445	0.85	+1.2
5,319,004	+		Echvi_4445	0.85	+0.2
5,319,004	+		Echvi_4445	0.85	-1.0
5,319,004	+		Echvi_4445	0.85	+0.4
5,319,004	+		Echvi_4445	0.85	-0.8
5,319,005	-		Echvi_4445	0.85	-0.1
5,319,005	-		Echvi_4445	0.85	-0.0
5,319,005	-		Echvi_4445	0.85	-1.4
5,319,005	-		Echvi_4445	0.85	+1.4
5,319,005	-		Echvi_4445	0.85	+0.4
5,319,005	-		Echvi_4445	0.85	+1.4
5,319,006	+		Echvi_4445	0.85	+1.1
5,319,006	+		Echvi_4445	0.85	-0.2
5,319,006	+		Echvi_4445	0.85	-0.2
5,319,006	+		Echvi_4445	0.85	-1.2
5,319,007	-		Echvi_4445	0.85	-0.2
5,319,009	+		Echvi_4445	0.85	+1.4
5,319,074	+		Echvi_4445	0.89	+1.6
5,319,074	+		Echvi_4445	0.89	-0.8
5,319,074	+		Echvi_4445	0.89	-0.4
5,319,074	+		Echvi_4445	0.89	+0.3
5,319,079	+		Echvi_4445	0.89	+0.7
5,319,079	+		Echvi_4445	0.89	+0.1
5,319,081	+		Echvi_4445	0.89	+1.0
5,319,081	+		Echvi_4445	0.89	-0.2
5,319,081	+		Echvi_4445	0.89	+0.4
5,319,081	+		Echvi_4445	0.89	+2.0
5,319,081	+		Echvi_4445	0.89	+1.2
5,319,082	-		Echvi_4445	0.89	+0.7
5,319,082	-		Echvi_4445	0.89	+1.2
5,319,123	+				-0.1
5,319,123	+				+0.3
5,319,124	-				-0.8
5,319,137	+				+0.2
5,319,143	-				-0.0
5,319,210	+				+0.1
5,319,210	+				-1.3
5,319,211	-				-0.5
5,319,214	+				-2.4
5,319,215	-				-0.4
5,319,236	-				-2.3
5,319,267	+				+0.3
5,319,267	+				+2.0
5,319,282	-				+0.2
5,319,282	-				+1.1
5,319,285	+				-0.0
5,319,285	+				+2.4
5,319,285	+				-0.2
5,319,286	-				-0.5
5,319,286	-				-0.5
5,319,352	-				-0.3
5,319,352	-				+0.8
5,319,352	-				-1.0
5,319,383	+				-0.3
5,319,384	-				-0.3
5,319,384	-				+2.0
5,319,415	-				-0.6
5,319,421	-				+0.3
5,319,421	-				-0.2
5,319,421	-				+0.9
5,319,421	-				-0.5
5,319,422	+				+0.4
5,319,423	-				+2.5
5,319,454	+				+1.2
5,319,454	+				-1.4
5,319,479	-				-1.2
5,319,502	-		Echvi_4446	0.11	+2.1
5,319,507	+		Echvi_4446	0.11	-0.5
5,319,507	+		Echvi_4446	0.11	+0.0
5,319,507	+		Echvi_4446	0.11	+0.4
5,319,508	-		Echvi_4446	0.11	-0.4
5,319,545	-		Echvi_4446	0.13	+2.5
5,319,568	+		Echvi_4446	0.14	-2.3
5,319,569	-		Echvi_4446	0.14	+2.0
5,319,569	-		Echvi_4446	0.14	+0.8
5,319,576	+		Echvi_4446	0.15	-0.5
5,319,614	-		Echvi_4446	0.17	-1.2
5,319,645	+		Echvi_4446	0.18	+0.4
5,319,645	+		Echvi_4446	0.18	-0.2
5,319,645	+		Echvi_4446	0.18	+1.3
5,319,645	+		Echvi_4446	0.18	-1.2
5,319,660	+		Echvi_4446	0.19	+2.0
5,319,675	+		Echvi_4446	0.20	+0.3
5,319,679	+		Echvi_4446	0.20	-1.7
5,319,781	-		Echvi_4446	0.25	-2.3
5,319,785	-		Echvi_4446	0.25	+0.8
5,319,785	-		Echvi_4446	0.25	+0.0
5,319,833	+		Echvi_4446	0.27	-0.1
5,319,833	+		Echvi_4446	0.27	+0.6
5,319,833	+		Echvi_4446	0.27	+1.4
5,319,833	+		Echvi_4446	0.27	-0.0
5,319,833	+		Echvi_4446	0.27	+1.7
5,319,833	+		Echvi_4446	0.27	+0.6
5,319,834	-		Echvi_4446	0.27	-0.5
5,319,885	+		Echvi_4446	0.30	-0.6
5,319,885	+		Echvi_4446	0.30	-1.8
5,319,914	-		Echvi_4446	0.31	-0.5
5,319,941	-		Echvi_4446	0.33	-0.8
5,319,990	-		Echvi_4446	0.35	+0.5
5,319,990	-		Echvi_4446	0.35	+3.3
5,319,993	+		Echvi_4446	0.35	-0.4
5,319,993	+		Echvi_4446	0.35	+0.5
5,319,994	-		Echvi_4446	0.35	+0.2
5,320,046	-		Echvi_4446	0.38	-0.7
5,320,046	-		Echvi_4446	0.38	-0.9
5,320,054	+		Echvi_4446	0.38	-0.7
5,320,054	+		Echvi_4446	0.38	+0.2
5,320,054	+		Echvi_4446	0.38	-0.4
5,320,055	-		Echvi_4446	0.38	-1.1
5,320,058	+		Echvi_4446	0.38	-0.8
5,320,058	+		Echvi_4446	0.38	+1.6
5,320,058	+		Echvi_4446	0.38	+0.3
5,320,059	-		Echvi_4446	0.39	+0.2
5,320,059	-		Echvi_4446	0.39	-2.5
5,320,059	-		Echvi_4446	0.39	-0.2
5,320,066	+		Echvi_4446	0.39	+1.6
5,320,067	-		Echvi_4446	0.39	-1.4
5,320,100	-		Echvi_4446	0.41	-0.0
5,320,147	+		Echvi_4446	0.43	+0.2
5,320,148	-		Echvi_4446	0.43	-0.3
5,320,148	-		Echvi_4446	0.43	+2.1
5,320,152	+		Echvi_4446	0.43	-1.1
5,320,191	+		Echvi_4446	0.45	-0.2
5,320,207	+		Echvi_4446	0.46	+1.0
5,320,216	+		Echvi_4446	0.46	+0.6
5,320,217	-		Echvi_4446	0.46	+0.0
5,320,231	+		Echvi_4446	0.47	+0.5