Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4422

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,285,583	+		Echvi_4420	0.38	-1.7
5,285,583	+		Echvi_4420	0.38	-0.0
5,285,583	+		Echvi_4420	0.38	-0.6
5,285,583	+		Echvi_4420	0.38	+1.4
5,285,588	+		Echvi_4420	0.39	+1.0
5,285,589	-		Echvi_4420	0.39	-1.6
5,285,700	+		Echvi_4420	0.56	+0.1
5,285,728	+		Echvi_4420	0.60	+1.7
5,285,753	-		Echvi_4420	0.64	-0.3
5,285,753	-		Echvi_4420	0.64	-0.4
5,285,857	-		Echvi_4420	0.79	-1.3
5,285,971	-				+0.1
5,285,971	-				-1.0
5,286,031	+				+0.5
5,286,073	+		Echvi_4421	0.21	+0.4
5,286,117	+		Echvi_4421	0.35	+1.1
5,286,121	+		Echvi_4421	0.36	-0.4
5,286,121	+		Echvi_4421	0.36	-0.5
5,286,121	+		Echvi_4421	0.36	+0.3
5,286,122	-		Echvi_4421	0.36	-2.3
5,286,122	-		Echvi_4421	0.36	+1.4
5,286,207	+		Echvi_4421	0.63	-0.1
5,286,208	-		Echvi_4421	0.63	-0.2
5,286,208	-		Echvi_4421	0.63	-0.8
5,286,247	+		Echvi_4421	0.76	-0.2
5,286,247	+		Echvi_4421	0.76	+0.8
5,286,248	-		Echvi_4421	0.76	+0.5
5,286,252	+		Echvi_4421	0.77	-0.6
5,286,322	+				+1.6
5,286,322	+				+0.1
5,286,322	+				+0.3
5,286,322	+				+0.1
5,286,322	+				+0.3
5,286,322	+				+0.7
5,286,322	+				+0.3
5,286,323	-				-0.6
5,286,323	-				-0.8
5,286,323	-				+0.1
5,286,323	-				-1.5
5,286,323	-				-1.5
5,286,323	-				-0.4
5,286,324	+				-0.2
5,286,325	-				-0.7
5,286,325	-				+1.5
5,286,325	-				-0.2
5,286,325	-				+1.2
5,286,325	-				+0.8
5,286,502	-				-0.8
5,286,550	-				+1.6
5,286,551	+				+0.7
5,286,551	+				-0.0
5,286,552	-				-0.2
5,286,555	+				+0.8
5,286,555	+				+0.6
5,286,603	+				-0.8
5,286,603	+				-0.0
5,286,691	+				-0.0
5,286,715	+				-1.0
5,286,715	+				-0.9
5,286,715	+				-0.6
5,286,754	+				+2.0
5,286,754	+				+0.9
5,286,766	+		Echvi_4422	0.10	+1.4
5,286,850	+		Echvi_4422	0.15	-1.8
5,286,922	+		Echvi_4422	0.19	-0.1
5,286,923	-		Echvi_4422	0.19	+0.2
5,286,967	-		Echvi_4422	0.21	-0.3
5,287,133	-		Echvi_4422	0.30	-0.0
5,287,157	+		Echvi_4422	0.31	-0.4
5,287,357	+		Echvi_4422	0.42	-0.8
5,287,408	+		Echvi_4422	0.45	-1.2
5,287,408	+		Echvi_4422	0.45	+1.6
5,287,408	+		Echvi_4422	0.45	+0.1
5,287,409	-		Echvi_4422	0.45	+0.4
5,287,409	-		Echvi_4422	0.45	-0.4
5,287,409	-		Echvi_4422	0.45	+0.8
5,287,409	-		Echvi_4422	0.45	-0.0
5,287,457	-		Echvi_4422	0.48	-0.2
5,287,507	+		Echvi_4422	0.51	-1.8
5,287,507	+		Echvi_4422	0.51	+0.3
5,287,507	+		Echvi_4422	0.51	-0.3
5,287,509	+		Echvi_4422	0.51	-2.2
5,287,510	-		Echvi_4422	0.51	+0.7
5,287,516	+		Echvi_4422	0.51	-0.5
5,287,517	-		Echvi_4422	0.51	-1.0
5,287,552	+		Echvi_4422	0.53	+1.1
5,287,699	+		Echvi_4422	0.61	+0.7
5,287,700	-		Echvi_4422	0.61	+0.0
5,287,700	-		Echvi_4422	0.61	+0.0
5,287,768	+		Echvi_4422	0.65	+0.5
5,287,768	+		Echvi_4422	0.65	-0.2
5,287,769	-		Echvi_4422	0.65	-1.9
5,287,769	-		Echvi_4422	0.65	+2.6
5,287,834	+		Echvi_4422	0.68	+0.7
5,287,835	-		Echvi_4422	0.68	+0.4
5,287,868	-		Echvi_4422	0.70	+0.3
5,287,883	+		Echvi_4422	0.71	-2.0
5,287,883	+		Echvi_4422	0.71	+0.5
5,287,884	-		Echvi_4422	0.71	+1.5
5,287,888	-		Echvi_4422	0.71	+1.4
5,287,904	-		Echvi_4422	0.72	+0.0
5,287,905	+		Echvi_4422	0.72	+1.2
5,287,906	-		Echvi_4422	0.72	+0.7
5,287,906	-		Echvi_4422	0.72	+0.2
5,287,945	+		Echvi_4422	0.74	+0.4
5,287,945	+		Echvi_4422	0.74	-0.2
5,288,041	+		Echvi_4422	0.80	-0.4
5,288,071	+		Echvi_4422	0.81	-0.2
5,288,071	+		Echvi_4422	0.81	-1.7
5,288,287	-				-0.9
5,288,287	-				-1.0
5,288,410	+				+0.2
5,288,410	+				+3.1
5,288,411	-				+0.8
5,288,411	-				+1.3
5,288,423	-				+2.4
5,288,599	+		Echvi_4423	0.16	+0.3
5,288,600	-		Echvi_4423	0.16	-0.2
5,288,677	+		Echvi_4423	0.35	+0.2
5,288,677	+		Echvi_4423	0.35	+0.7
5,288,760	+		Echvi_4423	0.55	-0.3
5,288,760	+		Echvi_4423	0.55	+1.0
5,288,760	+		Echvi_4423	0.55	-1.5
5,288,761	-		Echvi_4423	0.55	-0.2
5,288,761	-		Echvi_4423	0.55	-0.6
5,288,761	-		Echvi_4423	0.55	+0.0
5,288,780	+		Echvi_4423	0.59	+0.6
5,288,781	-		Echvi_4423	0.60	-0.2
5,288,782	+		Echvi_4423	0.60	-1.1
5,288,806	-		Echvi_4423	0.65	+0.2
5,288,813	+		Echvi_4423	0.67	-0.7
5,288,853	-		Echvi_4423	0.77	-0.4
5,288,853	-		Echvi_4423	0.77	-0.6
5,288,853	-		Echvi_4423	0.77	-2.1
5,288,876	+		Echvi_4423	0.82	-0.3
5,288,876	+		Echvi_4423	0.82	-0.7
5,288,876	+		Echvi_4423	0.82	-0.0
5,288,877	-		Echvi_4423	0.82	-0.4
5,288,877	-		Echvi_4423	0.82	-0.4
5,288,877	-		Echvi_4423	0.82	-0.1
5,288,877	-		Echvi_4423	0.82	-0.3
5,288,877	-		Echvi_4423	0.82	+0.9
5,288,877	-		Echvi_4423	0.82	+1.2
5,288,877	-		Echvi_4423	0.82	-0.3
5,288,878	+		Echvi_4423	0.83	+0.7
5,288,878	+		Echvi_4423	0.83	+0.5
5,288,879	-		Echvi_4423	0.83	-1.2
5,288,879	-		Echvi_4423	0.83	-1.0
5,288,879	-		Echvi_4423	0.83	-0.7
5,288,909	-				-0.9
5,288,909	-				-0.0
5,288,925	-				-1.3
5,288,925	-				-0.8
5,288,925	-				-2.0
5,288,927	-				+0.9
5,288,948	+				-1.3
5,288,978	+				+0.5
5,288,979	-				-1.0
5,288,979	-				+0.3
5,289,098	+				+0.7
5,289,178	+				-0.3
5,289,179	-				-0.7
5,289,184	+				+0.3
5,289,193	+				-0.0
5,289,206	+				-0.4
5,289,206	+				-1.2
5,289,206	+				-0.9
5,289,207	-				-0.5
5,289,210	+				-1.3
5,289,211	-				-0.4
5,289,235	+				-0.2
5,289,235	+				-0.6
5,289,235	+				-1.5
5,289,235	+				-0.8
5,289,235	+				+2.0
5,289,236	-				+0.6
5,289,246	+				-1.7
5,289,246	+				+0.2
5,289,252	+				-2.5
5,289,252	+				-1.7
5,289,252	+				+0.1
5,289,253	-				+0.7
5,289,255	+				-1.3
5,289,255	+				-1.4
5,289,288	+				+0.4
5,289,289	-				-0.5
5,289,292	-				-0.9
5,289,340	+				-0.2
5,289,363	+				-0.8