Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4379

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,234,862	-		Echvi_4378	0.46	+1.2
5,234,888	+		Echvi_4378	0.53	-1.2
5,234,888	+		Echvi_4378	0.53	+0.4
5,234,888	+		Echvi_4378	0.53	-0.3
5,234,888	+		Echvi_4378	0.53	-0.1
5,234,888	+		Echvi_4378	0.53	-0.9
5,234,888	+		Echvi_4378	0.53	-0.0
5,234,889	-		Echvi_4378	0.53	-1.2
5,234,889	-		Echvi_4378	0.53	-0.6
5,234,889	-		Echvi_4378	0.53	+2.5
5,234,889	-		Echvi_4378	0.53	+1.6
5,234,892	+		Echvi_4378	0.54	-0.5
5,234,892	+		Echvi_4378	0.54	-0.1
5,234,892	+		Echvi_4378	0.54	-0.8
5,234,892	+		Echvi_4378	0.54	-2.6
5,234,892	+		Echvi_4378	0.54	-1.4
5,234,892	+		Echvi_4378	0.54	-0.0
5,234,892	+		Echvi_4378	0.54	-0.8
5,234,892	+		Echvi_4378	0.54	-1.2
5,234,892	+		Echvi_4378	0.54	+0.1
5,234,892	+		Echvi_4378	0.54	+0.7
5,234,892	+		Echvi_4378	0.54	+0.1
5,234,893	-		Echvi_4378	0.54	+1.2
5,234,893	-		Echvi_4378	0.54	+1.4
5,234,893	-		Echvi_4378	0.54	+0.9
5,234,893	-		Echvi_4378	0.54	-1.4
5,234,893	-		Echvi_4378	0.54	-0.3
5,234,893	-		Echvi_4378	0.54	+0.4
5,234,893	-		Echvi_4378	0.54	+2.6
5,234,893	-		Echvi_4378	0.54	+0.7
5,234,893	-		Echvi_4378	0.54	-0.0
5,234,894	+		Echvi_4378	0.54	+1.0
5,234,934	+		Echvi_4378	0.65	+0.8
5,234,934	+		Echvi_4378	0.65	+0.6
5,234,934	+		Echvi_4378	0.65	-0.7
5,234,934	+		Echvi_4378	0.65	+0.1
5,234,935	-		Echvi_4378	0.65	+0.2
5,234,939	-		Echvi_4378	0.66	+0.0
5,234,963	+		Echvi_4378	0.72	-1.7
5,234,964	-		Echvi_4378	0.73	-0.4
5,234,964	-		Echvi_4378	0.73	-0.2
5,235,124	-				-0.9
5,235,137	+				-0.1
5,235,219	-				-0.2
5,235,296	-				+0.1
5,235,382	+				+0.3
5,235,462	+				-0.4
5,235,516	+				+0.3
5,235,517	-				-1.5
5,235,537	+				-0.4
5,235,537	+				-1.2
5,235,537	+				-0.2
5,235,538	-				+0.8
5,235,538	-				-0.4
5,235,538	-				+1.0
5,235,538	-				-1.4
5,235,539	+				+0.5
5,235,539	+				+0.6
5,235,611	+				+0.3
5,235,612	-				+0.7
5,235,684	+				+0.9
5,235,685	-				+0.4
5,235,685	-				+0.7
5,235,711	+				-0.7
5,235,715	-				+0.2
5,235,722	+				-0.1
5,235,723	-				+1.0
5,235,802	+				-0.2
5,235,803	-				+0.2
5,235,812	-				+0.9
5,235,835	+				+3.2
5,235,906	+				-1.0
5,235,937	+				-1.2
5,235,968	+				-2.2
5,235,968	+				+0.5
5,235,969	-				+0.1
5,235,972	+				+0.2
5,235,972	+				-0.8
5,236,049	+		Echvi_4379	0.11	-0.5
5,236,056	-		Echvi_4379	0.12	+0.3
5,236,091	+		Echvi_4379	0.14	+1.0
5,236,100	+		Echvi_4379	0.14	+0.8
5,236,106	+		Echvi_4379	0.15	-0.6
5,236,139	+		Echvi_4379	0.16	-0.4
5,236,140	-		Echvi_4379	0.16	-0.9
5,236,164	+		Echvi_4379	0.18	+0.4
5,236,164	+		Echvi_4379	0.18	+0.4
5,236,260	+		Echvi_4379	0.23	+0.3
5,236,261	-		Echvi_4379	0.23	+0.4
5,236,261	-		Echvi_4379	0.23	-0.2
5,236,366	+		Echvi_4379	0.29	+1.0
5,236,444	+		Echvi_4379	0.33	-0.1
5,236,444	+		Echvi_4379	0.33	+1.0
5,236,445	-		Echvi_4379	0.33	+1.3
5,236,445	-		Echvi_4379	0.33	+0.9
5,236,464	-		Echvi_4379	0.34	+0.5
5,236,464	-		Echvi_4379	0.34	+0.1
5,236,485	+		Echvi_4379	0.35	+1.6
5,236,486	-		Echvi_4379	0.35	-1.9
5,236,486	-		Echvi_4379	0.35	+0.6
5,236,501	-		Echvi_4379	0.36	-0.4
5,236,501	-		Echvi_4379	0.36	-0.0
5,236,585	-		Echvi_4379	0.41	-1.1
5,236,602	+		Echvi_4379	0.42	+1.5
5,236,604	+		Echvi_4379	0.42	+2.0
5,236,605	-		Echvi_4379	0.42	-0.4
5,236,647	+		Echvi_4379	0.44	-0.7
5,236,779	+		Echvi_4379	0.51	+0.4
5,236,780	-		Echvi_4379	0.51	+0.1
5,236,814	+		Echvi_4379	0.53	-0.8
5,236,814	+		Echvi_4379	0.53	+1.0
5,236,815	-		Echvi_4379	0.53	+0.1
5,236,815	-		Echvi_4379	0.53	-0.4
5,236,816	+		Echvi_4379	0.53	-0.6
5,236,816	+		Echvi_4379	0.53	-1.0
5,236,816	+		Echvi_4379	0.53	+1.7
5,236,817	-		Echvi_4379	0.53	-1.9
5,236,817	-		Echvi_4379	0.53	+1.7
5,236,867	-		Echvi_4379	0.56	-0.5
5,236,907	+		Echvi_4379	0.58	+0.0
5,236,907	+		Echvi_4379	0.58	+0.2
5,236,908	-		Echvi_4379	0.58	-0.3
5,236,928	+		Echvi_4379	0.59	-1.7
5,236,928	+		Echvi_4379	0.59	-0.9
5,236,929	-		Echvi_4379	0.59	+2.1
5,237,048	+		Echvi_4379	0.66	+1.3
5,237,066	-		Echvi_4379	0.67	+0.7
5,237,107	-		Echvi_4379	0.69	-1.2
5,237,107	-		Echvi_4379	0.69	+0.4
5,237,124	-		Echvi_4379	0.70	-1.3
5,237,125	+		Echvi_4379	0.70	+1.3
5,237,125	+		Echvi_4379	0.70	-0.3
5,237,125	+		Echvi_4379	0.70	-0.5
5,237,125	+		Echvi_4379	0.70	+0.2
5,237,126	-		Echvi_4379	0.70	+0.9
5,237,126	-		Echvi_4379	0.70	-0.2
5,237,126	-		Echvi_4379	0.70	+0.6
5,237,126	-		Echvi_4379	0.70	-0.8
5,237,147	+		Echvi_4379	0.71	+0.6
5,237,159	+		Echvi_4379	0.72	+0.3
5,237,160	-		Echvi_4379	0.72	+0.5
5,237,238	+		Echvi_4379	0.76	-0.6
5,237,238	+		Echvi_4379	0.76	-0.7
5,237,238	+		Echvi_4379	0.76	+1.2
5,237,238	+		Echvi_4379	0.76	+1.3
5,237,239	-		Echvi_4379	0.76	+3.0
5,237,239	-		Echvi_4379	0.76	+0.6
5,237,239	-		Echvi_4379	0.76	+1.0
5,237,239	-		Echvi_4379	0.76	-1.4
5,237,241	-		Echvi_4379	0.76	-1.5
5,237,241	-		Echvi_4379	0.76	+1.0
5,237,281	+		Echvi_4379	0.79	+1.0
5,237,283	+		Echvi_4379	0.79	-0.5
5,237,284	-		Echvi_4379	0.79	+0.8
5,237,284	-		Echvi_4379	0.79	+2.6
5,237,302	+		Echvi_4379	0.80	-2.0
5,237,302	+		Echvi_4379	0.80	-1.4
5,237,303	-		Echvi_4379	0.80	+0.9
5,237,303	-		Echvi_4379	0.80	-1.8
5,237,303	-		Echvi_4379	0.80	-1.7
5,237,303	-		Echvi_4379	0.80	-1.1
5,237,323	-		Echvi_4379	0.81	+0.1
5,237,418	-		Echvi_4379	0.86	+0.3
5,237,418	-		Echvi_4379	0.86	-2.4
5,237,451	+		Echvi_4379	0.88	+0.2
5,237,452	-		Echvi_4379	0.88	-1.4
5,237,461	+		Echvi_4379	0.88	+1.6
5,237,461	+		Echvi_4379	0.88	-1.1
5,237,488	-		Echvi_4379	0.90	+1.2
5,237,627	-				-0.0
5,237,710	+		Echvi_4380	0.19	-1.4
5,237,813	+		Echvi_4380	0.72	+0.1
5,237,819	-		Echvi_4380	0.75	-0.4
5,237,819	-		Echvi_4380	0.75	-0.1
5,237,819	-		Echvi_4380	0.75	-0.5
5,237,836	-		Echvi_4380	0.84	-0.4
5,237,847	-				+0.5
5,237,848	+				+1.4
5,237,857	+				-0.6
5,237,858	-				-1.2
5,237,858	-				+1.4
5,237,858	-				+1.2
5,237,858	-				-1.2
5,237,907	-				+1.0
5,237,910	+				-0.4
5,237,924	-				+0.8
5,237,928	-				-0.7
5,238,014	+				-1.2
5,238,058	+				+0.4
5,238,058	+				-0.4
5,238,058	+				-0.8
5,238,059	-				-1.1
5,238,114	+				+0.4
5,238,115	-				-0.8
5,238,120	-				-0.7
5,238,135	+				+0.8
5,238,135	+				-0.1
5,238,263	+				-0.3
5,238,484	+		Echvi_4381	0.14	+0.1
5,238,512	+		Echvi_4381	0.16	+0.0
5,238,532	+		Echvi_4381	0.17	+0.8