Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4328

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
5,172,539	+				+0.8
5,172,540	-				-0.9
5,172,541	+				+0.1
5,172,541	+				-0.1
5,172,541	+				+1.2
5,172,541	+				-0.0
5,172,541	+				+0.6
5,172,541	+				+0.2
5,172,542	-				+1.4
5,172,542	-				-2.8
5,172,636	+				-0.7
5,172,877	+		Echvi_4327	0.15	-1.3
5,172,877	+		Echvi_4327	0.15	+1.6
5,172,877	+		Echvi_4327	0.15	-0.5
5,172,878	-		Echvi_4327	0.15	-1.1
5,172,878	-		Echvi_4327	0.15	-0.2
5,172,878	-		Echvi_4327	0.15	+0.9
5,172,913	-		Echvi_4327	0.22	+0.7
5,173,044	-		Echvi_4327	0.45	+0.8
5,173,087	+		Echvi_4327	0.53	-2.1
5,173,088	-		Echvi_4327	0.53	+1.6
5,173,449	+				-0.4
5,173,451	+				-1.4
5,173,451	+				-2.2
5,173,452	-				-0.1
5,173,513	+				-1.9
5,173,514	-				+3.8
5,173,515	+				-0.7
5,173,631	+		Echvi_4328	0.24	-1.4
5,173,778	+		Echvi_4328	0.48	-0.2
5,173,827	+		Echvi_4328	0.56	-1.2
5,173,828	-		Echvi_4328	0.56	-0.5
5,173,828	-		Echvi_4328	0.56	-0.3
5,173,828	-		Echvi_4328	0.56	-0.7
5,173,915	+		Echvi_4328	0.70	-1.4
5,173,916	-		Echvi_4328	0.70	-2.5
5,173,990	+		Echvi_4328	0.82	-1.2
5,173,991	-		Echvi_4328	0.82	-0.3
5,173,991	-		Echvi_4328	0.82	-0.2
5,173,993	+		Echvi_4328	0.83	-0.2
5,173,994	-		Echvi_4328	0.83	-1.9
5,174,001	+		Echvi_4328	0.84	-0.6
5,174,057	-				-0.5
5,174,085	+				-2.4
5,174,086	-				+0.1
5,174,088	+				+0.4
5,174,088	+				+0.8
5,174,088	+				-2.4
5,174,089	-				-1.4
5,174,089	-				-0.1
5,174,090	+				-2.8
5,174,134	+				+0.6
5,174,401	-		Echvi_4329	0.12	-0.6
5,174,401	-		Echvi_4329	0.12	-1.6
5,174,654	+		Echvi_4329	0.23	+0.0
5,174,704	+		Echvi_4329	0.25	-0.3
5,174,730	+		Echvi_4329	0.26	-1.6
5,174,733	-		Echvi_4329	0.26	+0.2
5,174,832	+		Echvi_4329	0.30	-2.0
5,174,925	+		Echvi_4329	0.34	-0.9
5,174,925	+		Echvi_4329	0.34	-0.4
5,174,925	+		Echvi_4329	0.34	-1.4
5,174,925	+		Echvi_4329	0.34	-0.9
5,174,926	-		Echvi_4329	0.34	-1.2
5,174,926	-		Echvi_4329	0.34	+0.1
5,174,926	-		Echvi_4329	0.34	-0.7
5,174,926	-		Echvi_4329	0.34	-1.6
5,174,926	-		Echvi_4329	0.34	-0.7
5,174,946	+		Echvi_4329	0.35	+0.2