Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4130

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,946,323	+		Echvi_4129	0.70	+0.5
4,946,323	+		Echvi_4129	0.70	-0.0
4,946,324	-		Echvi_4129	0.70	-0.2
4,946,324	-		Echvi_4129	0.70	-1.8
4,946,331	+		Echvi_4129	0.70	-0.2
4,946,331	+		Echvi_4129	0.70	-0.9
4,946,332	-		Echvi_4129	0.70	-0.7
4,946,416	+		Echvi_4129	0.74	+0.5
4,946,449	-		Echvi_4129	0.75	+0.8
4,946,481	-		Echvi_4129	0.77	-1.2
4,946,608	+		Echvi_4129	0.82	+0.3
4,946,620	-		Echvi_4129	0.83	-0.3
4,946,625	+		Echvi_4129	0.83	-0.7
4,946,625	+		Echvi_4129	0.83	-0.5
4,946,625	+		Echvi_4129	0.83	+1.5
4,946,625	+		Echvi_4129	0.83	-0.9
4,946,625	+		Echvi_4129	0.83	-1.8
4,946,625	+		Echvi_4129	0.83	+0.1
4,946,626	-		Echvi_4129	0.83	-0.3
4,946,626	-		Echvi_4129	0.83	-0.5
4,946,626	-		Echvi_4129	0.83	-0.5
4,946,698	-		Echvi_4129	0.86	+0.9
4,946,698	-		Echvi_4129	0.86	-0.9
4,946,791	-		Echvi_4129	0.90	+2.2
4,946,791	-		Echvi_4129	0.90	-0.7
4,946,804	-				-0.1
4,946,811	-				+1.0
4,946,869	+				-0.5
4,946,870	-				-0.6
4,946,873	+				+1.2
4,946,899	+				-0.5
4,946,900	-				-1.7
4,946,902	-				+2.2
4,946,902	-				+0.8
4,947,001	+				-1.4
4,947,004	+				+0.9
4,947,025	+				-1.3
4,947,025	+				-0.1
4,947,045	+				-0.2
4,947,045	+				+1.9
4,947,076	+				+0.1
4,947,083	-				-1.0
4,947,083	-				-0.7
4,947,083	-				-0.7
4,947,107	-				+1.2
4,947,123	-				+0.4
4,947,126	-				+0.3
4,947,130	+				+0.1
4,947,131	-				-0.6
4,947,133	+				-0.1
4,947,135	+				-0.6
4,947,135	+				+0.1
4,947,136	-				-0.3
4,947,143	+				-0.9
4,947,148	-				-1.0
4,947,163	+				+1.1
4,947,163	+				-0.8
4,947,164	-				+0.1
4,947,296	+				-0.1
4,947,296	+				-0.1
4,947,297	-				-0.9
4,947,297	-				-1.2
4,947,318	+				+0.9
4,947,319	-				-1.2
4,947,319	-				+0.5
4,947,452	+		Echvi_4130	0.17	+1.0
4,947,452	+		Echvi_4130	0.17	+0.6
4,947,453	-		Echvi_4130	0.17	+1.7
4,947,453	-		Echvi_4130	0.17	-3.1
4,947,453	-		Echvi_4130	0.17	-0.2
4,947,583	+		Echvi_4130	0.34	-0.9
4,947,583	+		Echvi_4130	0.34	-0.6
4,947,583	+		Echvi_4130	0.34	+0.2
4,947,584	-		Echvi_4130	0.34	-2.7
4,947,584	-		Echvi_4130	0.34	-0.3
4,947,584	-		Echvi_4130	0.34	+0.5
4,947,584	-		Echvi_4130	0.34	+1.9
4,947,606	+		Echvi_4130	0.37	+1.1
4,947,625	+		Echvi_4130	0.40	+2.5
4,947,625	+		Echvi_4130	0.40	+0.4
4,947,626	-		Echvi_4130	0.40	-0.2
4,947,639	+		Echvi_4130	0.42	+0.9
4,947,734	-		Echvi_4130	0.54	-0.1
4,947,802	-		Echvi_4130	0.63	+0.1
4,947,820	+		Echvi_4130	0.65	+0.9
4,947,821	-		Echvi_4130	0.65	+0.2
4,947,821	-		Echvi_4130	0.65	-1.4
4,947,822	+		Echvi_4130	0.66	+0.3
4,947,858	+		Echvi_4130	0.70	+0.2
4,947,858	+		Echvi_4130	0.70	+0.6
4,947,858	+		Echvi_4130	0.70	-0.5
4,947,900	+		Echvi_4130	0.76	+1.2
4,948,024	-				+0.2
4,948,072	-				-0.9
4,948,072	-				-0.7
4,948,078	-				-0.1
4,948,078	-				-0.4
4,948,132	+				-1.2
4,948,136	+				-0.0
4,948,136	+				+0.8
4,948,136	+				-0.1
4,948,136	+				-1.0
4,948,136	+				+0.1
4,948,136	+				-0.1
4,948,136	+				-1.1
4,948,136	+				+1.6
4,948,136	+				+1.9
4,948,136	+				-0.1
4,948,136	+				-1.2
4,948,136	+				-0.1
4,948,136	+				-1.7
4,948,136	+				+0.0
4,948,178	+		Echvi_4131	0.15	-1.8
4,948,295	+		Echvi_4131	0.41	+0.2
4,948,295	+		Echvi_4131	0.41	+1.9
4,948,296	-		Echvi_4131	0.41	+0.2
4,948,329	+		Echvi_4131	0.48	+0.3
4,948,347	+		Echvi_4131	0.52	+0.4
4,948,358	+		Echvi_4131	0.54	-0.9
4,948,358	+		Echvi_4131	0.54	-0.5
4,948,359	-		Echvi_4131	0.55	-0.2
4,948,362	+		Echvi_4131	0.55	+0.3
4,948,363	-		Echvi_4131	0.55	-0.9
4,948,363	-		Echvi_4131	0.55	-0.0
4,948,380	+		Echvi_4131	0.59	-0.3
4,948,385	-		Echvi_4131	0.60	+0.6
4,948,412	+		Echvi_4131	0.66	+1.1
4,948,415	+		Echvi_4131	0.67	-2.7
4,948,415	+		Echvi_4131	0.67	-1.2
4,948,416	-		Echvi_4131	0.67	-0.6
4,948,417	+		Echvi_4131	0.67	-3.7
4,948,417	+		Echvi_4131	0.67	+1.7
4,948,417	+		Echvi_4131	0.67	+0.9
4,948,418	-		Echvi_4131	0.68	-1.6
4,948,418	-		Echvi_4131	0.68	+0.9
4,948,418	-		Echvi_4131	0.68	-1.3
4,948,419	+		Echvi_4131	0.68	+0.9
4,948,433	+		Echvi_4131	0.71	-0.3
4,948,434	-		Echvi_4131	0.71	+0.7
4,948,504	-		Echvi_4131	0.86	+1.2
4,948,565	+				+0.5
4,948,574	-				-1.2
4,948,653	+		Echvi_4132	0.15	+1.9
4,948,661	-		Echvi_4132	0.17	-0.1
4,948,704	+		Echvi_4132	0.25	+0.7
4,948,704	+		Echvi_4132	0.25	-1.3
4,948,704	+		Echvi_4132	0.25	-0.1
4,948,704	+		Echvi_4132	0.25	-0.2
4,948,704	+		Echvi_4132	0.25	-1.3
4,948,704	+		Echvi_4132	0.25	-1.5
4,948,705	-		Echvi_4132	0.25	-2.0
4,948,705	-		Echvi_4132	0.25	-1.1
4,948,705	-		Echvi_4132	0.25	-1.8
4,948,846	-		Echvi_4132	0.52	+1.1
4,948,854	+		Echvi_4132	0.53	-2.6
4,948,854	+		Echvi_4132	0.53	+1.5
4,948,865	+		Echvi_4132	0.55	-2.3
4,948,908	+		Echvi_4132	0.63	-1.2
4,948,911	+		Echvi_4132	0.64	-0.3
4,948,911	+		Echvi_4132	0.64	+0.9
4,948,911	+		Echvi_4132	0.64	-0.7
4,948,912	-		Echvi_4132	0.64	+1.1
4,948,929	+		Echvi_4132	0.67	-0.4
4,948,931	+		Echvi_4132	0.68	-0.4
4,948,931	+		Echvi_4132	0.68	+2.9
4,948,931	+		Echvi_4132	0.68	-0.1
4,948,931	+		Echvi_4132	0.68	-0.1
4,948,931	+		Echvi_4132	0.68	-0.9
4,948,931	+		Echvi_4132	0.68	-1.3
4,948,931	+		Echvi_4132	0.68	+0.6
4,948,931	+		Echvi_4132	0.68	+1.7
4,948,931	+		Echvi_4132	0.68	+0.0
4,948,932	-		Echvi_4132	0.68	-0.4
4,948,932	-		Echvi_4132	0.68	-1.4
4,948,932	-		Echvi_4132	0.68	-0.6
4,948,933	+		Echvi_4132	0.68	+0.2
4,948,934	-		Echvi_4132	0.68	-0.7
4,948,934	-		Echvi_4132	0.68	+2.9
4,948,942	+		Echvi_4132	0.70	+0.2
4,948,942	+		Echvi_4132	0.70	-0.6
4,948,943	-		Echvi_4132	0.70	-1.3
4,948,943	-		Echvi_4132	0.70	-0.8
4,948,943	-		Echvi_4132	0.70	-0.1
4,948,943	-		Echvi_4132	0.70	-0.5
4,948,943	-		Echvi_4132	0.70	-0.9
4,948,943	-		Echvi_4132	0.70	+0.7
4,948,981	-		Echvi_4132	0.77	+1.0
4,948,981	-		Echvi_4132	0.77	+1.6
4,948,981	-		Echvi_4132	0.77	+1.5