Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4071

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,879,983	-				-0.1
4,879,983	-				+1.2
4,880,020	+				+0.2
4,880,075	+				+0.8
4,880,075	+				+2.1
4,880,075	+				+1.9
4,880,075	+				+0.8
4,880,076	-				-1.0
4,880,076	-				-0.1
4,880,076	-				-0.5
4,880,094	+				-1.0
4,880,095	-				+0.1
4,880,120	-				+1.7
4,880,155	-				+0.2
4,880,155	-				+1.0
4,880,168	+				-0.2
4,880,169	-				+1.4
4,880,171	+				+0.3
4,880,171	+				+0.5
4,880,171	+				+0.8
4,880,171	+				-0.2
4,880,172	-				+1.0
4,880,172	-				-0.6
4,880,172	-				-0.6
4,880,215	+				+1.3
4,880,218	+				+0.0
4,880,218	+				-1.6
4,880,219	-				-2.1
4,880,219	-				+1.4
4,880,219	-				-1.7
4,880,219	-				-0.2
4,880,219	-				-0.1
4,880,219	-				-1.1
4,880,223	-				+1.9
4,880,223	-				+1.9
4,880,233	-				+0.9
4,880,233	-				+0.2
4,880,341	+				+0.3
4,880,361	+				+0.0
4,880,570	+		Echvi_4071	0.18	+0.9
4,880,570	+		Echvi_4071	0.18	-1.1
4,880,571	-		Echvi_4071	0.19	+1.9
4,880,571	-		Echvi_4071	0.19	+0.7
4,880,572	+		Echvi_4071	0.19	-0.1
4,880,572	+		Echvi_4071	0.19	+0.3
4,880,572	+		Echvi_4071	0.19	-0.2
4,880,573	-		Echvi_4071	0.19	-1.0
4,880,573	-		Echvi_4071	0.19	+0.9
4,880,573	-		Echvi_4071	0.19	-0.0
4,880,617	+		Echvi_4071	0.23	-1.9
4,880,639	+		Echvi_4071	0.25	-0.4
4,880,639	+		Echvi_4071	0.25	-0.4
4,880,639	+		Echvi_4071	0.25	+0.8
4,880,700	+		Echvi_4071	0.30	-1.3
4,880,701	-		Echvi_4071	0.30	+0.4
4,880,701	-		Echvi_4071	0.30	-0.7
4,880,716	+		Echvi_4071	0.31	-1.7
4,880,716	+		Echvi_4071	0.31	-1.0
4,880,784	+		Echvi_4071	0.37	+0.6
4,880,785	-		Echvi_4071	0.38	-1.0
4,880,868	+		Echvi_4071	0.45	+0.9
4,880,868	+		Echvi_4071	0.45	-1.0
4,880,868	+		Echvi_4071	0.45	+0.6
4,880,868	+		Echvi_4071	0.45	-0.8
4,880,868	+		Echvi_4071	0.45	-1.2
4,880,963	-		Echvi_4071	0.53	-0.1
4,880,967	-		Echvi_4071	0.54	+1.5
4,880,967	-		Echvi_4071	0.54	-1.6
4,880,989	+		Echvi_4071	0.56	-0.1
4,880,990	-		Echvi_4071	0.56	+0.5
4,881,078	+		Echvi_4071	0.63	-1.7
4,881,078	+		Echvi_4071	0.63	-0.7
4,881,078	+		Echvi_4071	0.63	+0.3
4,881,078	+		Echvi_4071	0.63	+0.2
4,881,124	+		Echvi_4071	0.68	+0.9
4,881,131	+		Echvi_4071	0.68	-0.0
4,881,187	+		Echvi_4071	0.73	-1.4
4,881,203	+		Echvi_4071	0.75	-0.6
4,881,221	-		Echvi_4071	0.76	+1.6
4,881,221	-		Echvi_4071	0.76	+0.3
4,881,260	-		Echvi_4071	0.80	+0.1
4,881,282	+		Echvi_4071	0.82	+0.8
4,881,290	+		Echvi_4071	0.82	-1.5
4,881,290	+		Echvi_4071	0.82	-1.0
4,881,376	+		Echvi_4071	0.90	-1.0
4,881,433	+				+0.2
4,881,434	-				+1.9
4,881,434	-				-0.1
4,881,434	-				-2.1
4,881,448	+				-1.0
4,881,449	-				-1.1
4,881,512	+				-0.5
4,881,513	-				+0.5
4,881,518	-				-0.4
4,881,605	+				+0.0
4,881,607	+				+0.3
4,881,607	+				+0.1
4,881,607	+				+0.3
4,881,608	-				-2.1
4,881,608	-				+0.3
4,881,608	-				+2.1
4,881,611	+				+0.0
4,881,611	+				+0.1
4,881,611	+				-0.1
4,881,611	+				-0.3
4,881,611	+				-0.4
4,881,611	+				+0.1
4,881,611	+				-0.3
4,881,611	+				-1.2
4,881,611	+				-0.4
4,881,611	+				-0.3
4,881,612	-				+1.3
4,881,612	-				-0.7
4,881,612	-				-1.1
4,881,612	-				-0.9
4,881,612	-				-0.1
4,881,612	-				-0.3
4,881,612	-				-1.1
4,881,617	+				-2.6
4,881,617	+				+0.4
4,881,617	+				-0.3
4,881,623	+				-0.2
4,881,623	+				-2.0
4,881,624	-				-0.7
4,881,652	+				-0.4
4,881,652	+				-0.3
4,881,652	+				-0.3
4,881,652	+				-0.2
4,881,652	+				-0.8
4,881,653	-				+0.5
4,881,653	-				+0.0
4,881,676	+				+0.4
4,881,676	+				+0.1
4,881,676	+				-1.1
4,881,677	-				-2.5
4,881,677	-				+0.5
4,881,677	-				-1.5
4,881,677	-				+0.5
4,881,677	-				-0.0
4,881,677	-				-0.9
4,881,677	-				+1.7
4,881,680	+				-0.3
4,881,680	+				+0.9
4,881,680	+				-0.6
4,881,681	-				-0.5
4,881,681	-				+0.6
4,881,681	-				-1.1
4,881,681	-				-0.0
4,881,681	-				-0.6
4,881,791	+		Echvi_4072	0.17	-0.8
4,881,850	+		Echvi_4072	0.21	+0.5
4,881,853	+		Echvi_4072	0.22	-1.5
4,881,853	+		Echvi_4072	0.22	+1.7
4,881,853	+		Echvi_4072	0.22	-0.4
4,881,854	-		Echvi_4072	0.22	+0.4
4,881,854	-		Echvi_4072	0.22	+0.2
4,881,857	+		Echvi_4072	0.22	+0.6
4,881,857	+		Echvi_4072	0.22	+0.9
4,881,858	-		Echvi_4072	0.22	+1.9
4,881,858	-		Echvi_4072	0.22	+1.1
4,881,915	+		Echvi_4072	0.26	+1.5
4,881,916	-		Echvi_4072	0.26	+0.3
4,881,938	+		Echvi_4072	0.28	-0.6
4,881,938	+		Echvi_4072	0.28	-2.3
4,881,938	+		Echvi_4072	0.28	+1.0
4,881,939	-		Echvi_4072	0.28	+0.4
4,881,939	-		Echvi_4072	0.28	-0.8
4,881,971	+		Echvi_4072	0.30	-1.8
4,881,971	+		Echvi_4072	0.30	+0.3
4,881,972	-		Echvi_4072	0.30	-1.2
4,881,972	-		Echvi_4072	0.30	-1.2
4,881,972	-		Echvi_4072	0.30	+0.7
4,881,974	+		Echvi_4072	0.30	+0.2
4,881,974	+		Echvi_4072	0.30	+1.3
4,881,975	-		Echvi_4072	0.30	+0.4
4,881,975	-		Echvi_4072	0.30	-1.5
4,881,978	+		Echvi_4072	0.30	-1.0
4,881,979	-		Echvi_4072	0.30	-0.3
4,881,979	-		Echvi_4072	0.30	-0.3
4,882,054	+		Echvi_4072	0.36	+0.3
4,882,054	+		Echvi_4072	0.36	+0.2
4,882,055	-		Echvi_4072	0.36	+0.2
4,882,080	+		Echvi_4072	0.37	-0.9
4,882,103	+		Echvi_4072	0.39	-0.7
4,882,104	-		Echvi_4072	0.39	-0.2
4,882,104	-		Echvi_4072	0.39	-0.5
4,882,113	+		Echvi_4072	0.40	-1.2
4,882,113	+		Echvi_4072	0.40	+1.3
4,882,114	-		Echvi_4072	0.40	-1.5
4,882,114	-		Echvi_4072	0.40	+0.4
4,882,269	-		Echvi_4072	0.51	-0.1
4,882,469	-		Echvi_4072	0.65	+0.6