Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4064

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,873,365	+				-2.0
4,873,366	-				+0.6
4,873,368	-				-2.6
4,873,373	-				-1.1
4,873,373	-				-0.6
4,873,470	+				-2.1
4,873,471	-				-1.1
4,873,494	+				+0.5
4,873,497	+				+0.7
4,873,497	+				-0.3
4,873,497	+				+0.1
4,873,514	+				+1.2
4,873,611	+		Echvi_4064	0.30	-0.4
4,873,611	+		Echvi_4064	0.30	-0.1
4,873,621	+		Echvi_4064	0.32	+1.2
4,873,622	-		Echvi_4064	0.32	-1.8
4,873,639	+		Echvi_4064	0.36	-2.4
4,873,640	-		Echvi_4064	0.36	-0.6
4,873,668	+		Echvi_4064	0.43	-0.1
4,873,672	+		Echvi_4064	0.44	-0.1
4,873,672	+		Echvi_4064	0.44	+0.2
4,873,673	-		Echvi_4064	0.44	-0.4
4,873,674	+		Echvi_4064	0.44	+0.9
4,873,674	+		Echvi_4064	0.44	+0.3
4,873,674	+		Echvi_4064	0.44	-0.7
4,873,675	-		Echvi_4064	0.44	-1.9
4,873,675	-		Echvi_4064	0.44	-1.0
4,873,675	-		Echvi_4064	0.44	+1.3
4,873,713	+		Echvi_4064	0.53	-0.5
4,873,714	-		Echvi_4064	0.53	+0.3
4,873,739	-		Echvi_4064	0.59	-1.3
4,873,749	+		Echvi_4064	0.61	+0.0
4,873,749	+		Echvi_4064	0.61	+0.0
4,873,800	+		Echvi_4064	0.73	-0.5
4,873,811	+		Echvi_4064	0.75	+0.9
4,873,835	-		Echvi_4064	0.80	+1.1
4,873,842	-		Echvi_4064	0.82	+1.1
4,873,922	-				+0.6
4,873,922	-				-1.0
4,873,922	-				+0.2
4,873,996	+				-0.1
4,873,996	+				-1.2
4,873,996	+				-1.1
4,873,996	+				+0.1
4,873,996	+				+0.4
4,873,996	+				+0.1
4,873,996	+				-0.8
4,873,997	-				+1.1
4,874,001	+				+0.3
4,874,001	+				+0.5
4,874,001	+				-1.0
4,874,001	+				+0.2
4,874,002	-				+0.7
4,874,002	-				+0.4
4,874,002	-				-1.4
4,874,051	-		Echvi_4065	0.11	+0.3
4,874,110	+		Echvi_4065	0.24	-0.4
4,874,116	+		Echvi_4065	0.26	+1.0
4,874,145	+		Echvi_4065	0.32	-0.0
4,874,145	+		Echvi_4065	0.32	+2.9
4,874,146	-		Echvi_4065	0.32	+0.2
4,874,146	-		Echvi_4065	0.32	-0.2
4,874,146	-		Echvi_4065	0.32	-2.2
4,874,275	-		Echvi_4065	0.61	-0.3
4,874,288	+		Echvi_4065	0.64	+1.9
4,874,291	+		Echvi_4065	0.64	+0.3
4,874,292	-		Echvi_4065	0.64	-0.5
4,874,292	-		Echvi_4065	0.64	-0.0
4,874,359	-		Echvi_4065	0.79	+0.4
4,874,364	+		Echvi_4065	0.80	+0.2
4,874,364	+		Echvi_4065	0.80	+0.4
4,874,365	-		Echvi_4065	0.81	+1.5
4,874,365	-		Echvi_4065	0.81	+0.5
4,874,426	+				-0.5
4,874,427	-				+2.0
4,874,427	-				-0.2
4,874,474	-				-0.0
4,874,511	+				+0.6
4,874,511	+				-0.5
4,874,511	+				-0.7
4,874,512	-				-0.5
4,874,512	-				+0.7
4,874,512	-				+0.1
4,874,512	-				-0.1
4,874,512	-				+0.2
4,874,516	-				+1.0
4,874,524	-				+0.5
4,874,555	+				-0.5
4,874,556	-				+0.0
4,874,556	-				+0.5
4,874,558	-		Echvi_4066	0.10	+1.2
4,874,623	+		Echvi_4066	0.24	+0.3
4,874,623	+		Echvi_4066	0.24	-0.1
4,874,624	-		Echvi_4066	0.24	+0.1
4,874,624	-		Echvi_4066	0.24	+1.3
4,874,624	-		Echvi_4066	0.24	-0.3
4,874,625	+		Echvi_4066	0.24	+1.0
4,874,626	-		Echvi_4066	0.25	-0.8
4,874,663	+		Echvi_4066	0.32	+1.4
4,874,671	+		Echvi_4066	0.34	-0.1
4,874,671	+		Echvi_4066	0.34	-0.1
4,874,672	-		Echvi_4066	0.34	+0.3
4,874,672	-		Echvi_4066	0.34	-1.9
4,874,674	-		Echvi_4066	0.35	-1.5
4,874,736	+		Echvi_4066	0.48	-0.5
4,874,737	-		Echvi_4066	0.48	+1.0
4,874,767	+		Echvi_4066	0.55	+0.1
4,874,767	+		Echvi_4066	0.55	-1.3
4,874,768	-		Echvi_4066	0.55	-0.1
4,874,889	+		Echvi_4066	0.80	+0.8