Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4034

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,830,381	+		Echvi_4033	0.41	+1.3
4,830,580	-		Echvi_4033	0.60	-2.5
4,830,667	+		Echvi_4033	0.67	+2.4
4,830,690	+		Echvi_4033	0.70	-0.3
4,830,694	+		Echvi_4033	0.70	+1.1
4,830,755	-		Echvi_4033	0.76	+0.7
4,830,755	-		Echvi_4033	0.76	+2.9
4,830,759	+		Echvi_4033	0.76	+0.5
4,830,929	-				-1.0
4,830,994	+				-0.3
4,830,994	+				-0.6
4,830,994	+				-1.2
4,830,995	-				-0.4
4,830,995	-				-0.4
4,831,014	+				-0.4
4,831,014	+				-0.1
4,831,014	+				-0.2
4,831,015	-				-0.8
4,831,019	-				-0.1
4,831,019	-				+0.3
4,831,019	-				-0.6
4,831,094	+				+0.3
4,831,167	+				+1.3
4,831,271	+				+2.9
4,831,274	-				+1.1
4,831,279	+				-1.0
4,831,279	+				-2.5
4,831,290	+				+0.4
4,831,391	+				+2.1
4,831,392	-				+0.7
4,831,440	+		Echvi_4034	0.11	-0.0
4,831,441	-		Echvi_4034	0.11	-0.0
4,831,444	-		Echvi_4034	0.11	+0.7
4,831,444	-		Echvi_4034	0.11	+0.5
4,831,499	+		Echvi_4034	0.17	+0.7
4,831,499	+		Echvi_4034	0.17	-0.2
4,831,500	-		Echvi_4034	0.17	-0.1
4,831,500	-		Echvi_4034	0.17	-0.8
4,831,500	-		Echvi_4034	0.17	+0.4
4,831,500	-		Echvi_4034	0.17	-0.6
4,831,500	-		Echvi_4034	0.17	+0.0
4,831,501	+		Echvi_4034	0.17	+1.5
4,831,501	+		Echvi_4034	0.17	+0.1
4,831,502	-		Echvi_4034	0.17	+0.5
4,831,641	+		Echvi_4034	0.32	+1.5
4,831,641	+		Echvi_4034	0.32	+0.1
4,831,642	-		Echvi_4034	0.33	-0.1
4,831,737	-		Echvi_4034	0.43	+0.4
4,831,831	-		Echvi_4034	0.53	-0.2
4,831,882	+		Echvi_4034	0.59	-1.3
4,831,882	+		Echvi_4034	0.59	+0.5
4,831,883	-		Echvi_4034	0.59	+0.2
4,831,883	-		Echvi_4034	0.59	+1.1
4,831,885	-		Echvi_4034	0.59	+0.2
4,831,948	-		Echvi_4034	0.66	+1.3
4,831,974	+		Echvi_4034	0.69	-1.5
4,831,975	-		Echvi_4034	0.69	+2.0
4,832,247	+				-1.5
4,832,270	+				+0.3
4,832,271	-				+0.5
4,832,325	-				+0.1
4,832,325	-				-0.5
4,832,357	+				-0.7
4,832,358	-				+0.1
4,832,358	-				+1.3
4,832,404	-				+0.4
4,832,410	+				-0.6
4,832,463	+				-1.1
4,832,464	-				-0.1
4,832,464	-				-0.5
4,832,469	+				+1.6
4,832,469	+				-0.7
4,832,469	+				-1.3
4,832,470	-				-0.9
4,832,470	-				-0.6
4,832,496	+				+0.1
4,832,534	+				-0.6
4,832,538	-				-0.6
4,832,556	-				-0.5
4,832,556	-				-1.1
4,832,572	-				+0.6
4,832,611	+				-0.7
4,832,641	+				+0.5
4,832,670	+				+0.5
4,832,687	-				+0.4
4,832,687	-				+0.4
4,832,726	+				+0.5
4,832,908	-				-0.4
4,832,911	+				-0.8
4,832,911	+				-1.6
4,832,912	-				-0.3
4,832,912	-				+0.1
4,832,912	-				-0.7
4,832,912	-				-0.9
4,832,912	-				-1.0
4,832,912	-				+1.4
4,833,014	+				-0.8
4,833,175	-		Echvi_4035	0.13	-0.1
4,833,187	+		Echvi_4035	0.13	+0.3
4,833,211	+		Echvi_4035	0.14	-0.1