Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4033

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,828,959	+		Echvi_4032	0.76	-0.1
4,828,959	+		Echvi_4032	0.76	+0.1
4,828,965	-		Echvi_4032	0.76	+1.9
4,829,045	-		Echvi_4032	0.82	-1.0
4,829,109	+		Echvi_4032	0.87	-1.2
4,829,109	+		Echvi_4032	0.87	+1.5
4,829,109	+		Echvi_4032	0.87	-0.8
4,829,110	-		Echvi_4032	0.87	+0.1
4,829,110	-		Echvi_4032	0.87	-0.9
4,829,198	+				+0.4
4,829,198	+				-0.5
4,829,209	+				-2.1
4,829,210	-				+0.1
4,829,263	-				-2.9
4,829,263	-				-1.3
4,829,266	-				-0.7
4,829,290	-				+1.1
4,829,301	-				-2.1
4,829,391	-				-0.7
4,829,392	+				-0.4
4,829,392	+				+1.1
4,829,392	+				-0.5
4,829,399	+				+0.1
4,829,400	-				+1.1
4,829,446	+				-0.9
4,829,446	+				+0.0
4,829,446	+				-0.7
4,829,458	+				-0.3
4,829,465	+				+1.2
4,829,469	-				-0.9
4,829,501	+				-0.1
4,829,509	-				-0.9
4,829,546	-				-0.8
4,829,546	-				-0.4
4,829,595	+				-1.0
4,829,628	-				+0.1
4,829,630	-				+0.9
4,829,630	-				-0.3
4,829,663	+				-0.3
4,829,664	-				-0.3
4,829,774	+				-0.6
4,829,775	-				-0.8
4,829,786	-				-0.9
4,829,786	-				-0.5
4,829,860	-				-0.2
4,829,886	-				-0.7
4,829,921	-				-0.4
4,829,931	+				-0.3
4,829,981	+				-0.3
4,829,982	-				+0.7
4,830,046	+		Echvi_4033	0.10	+1.4
4,830,101	-		Echvi_4033	0.16	+1.7
4,830,108	+		Echvi_4033	0.16	+1.9
4,830,108	+		Echvi_4033	0.16	-0.4
4,830,109	-		Echvi_4033	0.16	+0.9
4,830,196	+		Echvi_4033	0.24	+0.7
4,830,219	+		Echvi_4033	0.26	-0.7
4,830,321	+		Echvi_4033	0.36	-1.0
4,830,322	-		Echvi_4033	0.36	-0.8
4,830,381	+		Echvi_4033	0.41	+1.3
4,830,580	-		Echvi_4033	0.60	-2.5
4,830,667	+		Echvi_4033	0.67	+2.4
4,830,690	+		Echvi_4033	0.70	-0.3
4,830,694	+		Echvi_4033	0.70	+1.1
4,830,755	-		Echvi_4033	0.76	+0.7
4,830,755	-		Echvi_4033	0.76	+2.9
4,830,759	+		Echvi_4033	0.76	+0.5
4,830,929	-				-1.0
4,830,994	+				-0.3
4,830,994	+				-0.6
4,830,994	+				-1.2
4,830,995	-				-0.4
4,830,995	-				-0.4
4,831,014	+				-0.4
4,831,014	+				-0.1
4,831,014	+				-0.2
4,831,015	-				-0.8
4,831,019	-				-0.1
4,831,019	-				+0.3
4,831,019	-				-0.6
4,831,094	+				+0.3
4,831,167	+				+1.3
4,831,271	+				+2.9
4,831,274	-				+1.1
4,831,279	+				-1.0
4,831,279	+				-2.5
4,831,290	+				+0.4
4,831,391	+				+2.1
4,831,392	-				+0.7
4,831,440	+		Echvi_4034	0.11	-0.0
4,831,441	-		Echvi_4034	0.11	-0.0
4,831,444	-		Echvi_4034	0.11	+0.7
4,831,444	-		Echvi_4034	0.11	+0.5
4,831,499	+		Echvi_4034	0.17	+0.7
4,831,499	+		Echvi_4034	0.17	-0.2
4,831,500	-		Echvi_4034	0.17	-0.1
4,831,500	-		Echvi_4034	0.17	-0.8
4,831,500	-		Echvi_4034	0.17	+0.4
4,831,500	-		Echvi_4034	0.17	-0.6
4,831,500	-		Echvi_4034	0.17	+0.0
4,831,501	+		Echvi_4034	0.17	+1.5
4,831,501	+		Echvi_4034	0.17	+0.1
4,831,502	-		Echvi_4034	0.17	+0.5
4,831,641	+		Echvi_4034	0.32	+1.5
4,831,641	+		Echvi_4034	0.32	+0.1
4,831,642	-		Echvi_4034	0.33	-0.1
4,831,737	-		Echvi_4034	0.43	+0.4
4,831,831	-		Echvi_4034	0.53	-0.2
4,831,882	+		Echvi_4034	0.59	-1.3
4,831,882	+		Echvi_4034	0.59	+0.5
4,831,883	-		Echvi_4034	0.59	+0.2
4,831,883	-		Echvi_4034	0.59	+1.1
4,831,885	-		Echvi_4034	0.59	+0.2
4,831,948	-		Echvi_4034	0.66	+1.3
4,831,974	+		Echvi_4034	0.69	-1.5
4,831,975	-		Echvi_4034	0.69	+2.0