Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4015

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,806,862	-		Echvi_4014	0.58	+0.8
4,806,940	-		Echvi_4014	0.63	+0.1
4,806,944	+		Echvi_4014	0.63	-0.7
4,806,944	+		Echvi_4014	0.63	-0.3
4,806,945	-		Echvi_4014	0.63	-0.9
4,807,010	+		Echvi_4014	0.68	-1.2
4,807,010	+		Echvi_4014	0.68	+1.3
4,807,012	+		Echvi_4014	0.68	+0.6
4,807,012	+		Echvi_4014	0.68	+0.3
4,807,013	-		Echvi_4014	0.68	+0.3
4,807,027	+		Echvi_4014	0.69	-1.1
4,807,086	-		Echvi_4014	0.73	-0.5
4,807,106	+		Echvi_4014	0.74	+0.4
4,807,107	-		Echvi_4014	0.74	-0.4
4,807,135	-		Echvi_4014	0.76	-0.4
4,807,191	+		Echvi_4014	0.80	-1.1
4,807,198	+		Echvi_4014	0.80	-1.4
4,807,198	+		Echvi_4014	0.80	+0.9
4,807,198	+		Echvi_4014	0.80	-0.4
4,807,198	+		Echvi_4014	0.80	+3.0
4,807,198	+		Echvi_4014	0.80	+0.5
4,807,199	-		Echvi_4014	0.80	+0.3
4,807,199	-		Echvi_4014	0.80	-0.7
4,807,199	-		Echvi_4014	0.80	-0.3
4,807,199	-		Echvi_4014	0.80	+0.1
4,807,199	-		Echvi_4014	0.80	-0.1
4,807,199	-		Echvi_4014	0.80	-0.9
4,807,199	-		Echvi_4014	0.80	+0.5
4,807,202	+		Echvi_4014	0.81	-0.8
4,807,202	+		Echvi_4014	0.81	+0.0
4,807,202	+		Echvi_4014	0.81	-0.2
4,807,203	-		Echvi_4014	0.81	-0.1
4,807,203	-		Echvi_4014	0.81	-1.1
4,807,203	-		Echvi_4014	0.81	-0.3
4,807,203	-		Echvi_4014	0.81	+1.9
4,807,203	-		Echvi_4014	0.81	-0.2
4,807,203	-		Echvi_4014	0.81	-0.0
4,807,207	+		Echvi_4014	0.81	-0.5
4,807,207	+		Echvi_4014	0.81	-0.4
4,807,207	+		Echvi_4014	0.81	-0.6
4,807,207	+		Echvi_4014	0.81	+1.2
4,807,207	+		Echvi_4014	0.81	+0.5
4,807,207	+		Echvi_4014	0.81	-0.8
4,807,208	-		Echvi_4014	0.81	-0.4
4,807,208	-		Echvi_4014	0.81	-0.7
4,807,208	-		Echvi_4014	0.81	-0.4
4,807,208	-		Echvi_4014	0.81	-1.0
4,807,208	-		Echvi_4014	0.81	-1.7
4,807,208	-		Echvi_4014	0.81	-0.2
4,807,215	-		Echvi_4014	0.82	-0.3
4,807,215	-		Echvi_4014	0.82	-0.4
4,807,226	+		Echvi_4014	0.82	+0.1
4,807,229	-		Echvi_4014	0.83	-0.4
4,807,229	-		Echvi_4014	0.83	+0.1
4,807,295	+		Echvi_4014	0.87	+0.5
4,807,295	+		Echvi_4014	0.87	+0.4
4,807,296	-		Echvi_4014	0.87	-1.1
4,807,296	-		Echvi_4014	0.87	-0.2
4,807,323	-		Echvi_4014	0.89	-0.8
4,807,323	-		Echvi_4014	0.89	-1.7
4,807,331	+		Echvi_4014	0.89	+1.3
4,807,375	+				+0.3
4,807,384	-				+0.3
4,807,408	-				+0.1
4,807,424	+				-1.5
4,807,495	+				-0.3
4,807,505	+				-0.7
4,807,506	-				+0.4
4,807,530	-				+1.9
4,807,728	+				+0.7
4,807,769	+				+2.4
4,807,820	+				+0.0
4,807,855	+				-2.6
4,807,856	-				+0.9
4,808,028	+		Echvi_4015	0.22	-0.3
4,808,137	-		Echvi_4015	0.30	+0.1
4,808,137	-		Echvi_4015	0.30	+2.1
4,808,164	+		Echvi_4015	0.32	-2.2
4,808,164	+		Echvi_4015	0.32	-0.6
4,808,322	+		Echvi_4015	0.43	+0.2
4,808,322	+		Echvi_4015	0.43	-0.1
4,808,323	-		Echvi_4015	0.43	-1.9
4,808,323	-		Echvi_4015	0.43	-0.5
4,808,323	-		Echvi_4015	0.43	+2.4
4,808,326	-		Echvi_4015	0.43	-0.7
4,808,345	+		Echvi_4015	0.45	-2.3
4,808,456	+		Echvi_4015	0.53	-1.1
4,808,456	+		Echvi_4015	0.53	-1.7
4,808,464	-		Echvi_4015	0.53	+3.0
4,808,464	-		Echvi_4015	0.53	-1.0
4,808,464	-		Echvi_4015	0.53	+0.1
4,808,468	+		Echvi_4015	0.54	+1.7
4,808,469	-		Echvi_4015	0.54	-0.5
4,808,486	+		Echvi_4015	0.55	-0.5
4,808,487	-		Echvi_4015	0.55	-0.6
4,808,487	-		Echvi_4015	0.55	-0.1
4,808,495	-		Echvi_4015	0.56	-2.1
4,808,495	-		Echvi_4015	0.56	-0.0
4,808,495	-		Echvi_4015	0.56	-0.2
4,808,513	-		Echvi_4015	0.57	-0.5
4,808,568	+		Echvi_4015	0.61	+0.9
4,808,568	+		Echvi_4015	0.61	+1.2
4,808,569	-		Echvi_4015	0.61	-2.1
4,808,658	-		Echvi_4015	0.68	-1.1
4,808,658	-		Echvi_4015	0.68	-0.8
4,808,686	-		Echvi_4015	0.70	-1.3
4,808,746	-		Echvi_4015	0.74	-0.6
4,808,753	+		Echvi_4015	0.75	+0.0
4,808,754	-		Echvi_4015	0.75	-0.8
4,808,840	-		Echvi_4015	0.81	-0.5
4,808,840	-		Echvi_4015	0.81	+0.3
4,808,887	+		Echvi_4015	0.84	+1.4
4,808,939	+		Echvi_4015	0.88	-2.1
4,808,939	+		Echvi_4015	0.88	+0.9
4,809,096	+				-0.4
4,809,119	+				+0.7
4,809,119	+				-1.0
4,809,119	+				-0.2
4,809,120	-				+0.9
4,809,120	-				+0.2
4,809,120	-				-0.9
4,809,120	-				-0.2
4,809,120	-				+0.9
4,809,122	+				-0.4
4,809,123	-				+0.1
4,809,123	-				-0.2
4,809,123	-				-0.4
4,809,124	+				-0.4
4,809,124	+				+0.9
4,809,125	-				+0.4
4,809,153	+				-1.2
4,809,153	+				+0.0
4,809,153	+				+0.1
4,809,154	-				-0.1
4,809,163	+				+2.3
4,809,163	+				-1.3
4,809,163	+				-0.5
4,809,166	-				-1.0
4,809,198	+				-0.4
4,809,199	-				-0.1
4,809,236	+				-1.1
4,809,236	+				+0.5
4,809,236	+				+1.7
4,809,236	+				+0.5
4,809,237	-				-0.4
4,809,237	-				-0.1
4,809,239	-				+0.3
4,809,300	+				+0.8
4,809,325	-				-1.2
4,809,337	-				-1.5
4,809,353	-				-0.9
4,809,427	+				+0.1
4,809,427	+				+0.9
4,809,627	+				-0.3
4,809,683	+				-0.6
4,809,696	+				+1.3
4,809,696	+				+1.9
4,809,703	+				-0.5
4,809,704	-				-1.3
4,809,821	+				-0.4
4,809,821	+				-0.1
4,809,822	-				+1.0
4,809,822	-				-1.8
4,809,826	+				-0.8
4,809,827	-				-0.6
4,809,852	-				+1.9
4,809,852	-				+0.3
4,809,859	+				-0.8
4,809,896	+				-1.6
4,809,896	+				+0.1
4,809,897	-				-0.5
4,809,897	-				-0.1
4,809,905	+				-0.3
4,809,905	+				-0.4
4,809,905	+				-1.0
4,809,906	-				+1.4
4,809,906	-				-0.5
4,809,906	-				+1.9
4,809,914	+				+1.6
4,809,915	-				-0.1
4,809,927	+				+2.2
4,809,928	-				+0.4
4,809,950	+				+1.3
4,809,950	+				+1.9
4,809,952	+				+0.5
4,809,952	+				-0.6
4,809,952	+				+0.4
4,809,953	-				-1.0
4,810,005	+				-1.3
4,810,028	+				-0.2
4,810,029	-				-2.1
4,810,029	-				+0.1
4,810,029	-				+1.0
4,810,029	-				-0.7
4,810,054	+				-1.5
4,810,055	-				-1.5
4,810,056	+				+0.0
4,810,056	+				-1.0
4,810,084	+		Echvi_4016	0.10	-0.8
4,810,085	-		Echvi_4016	0.10	+0.2
4,810,087	-		Echvi_4016	0.10	-0.0
4,810,087	-		Echvi_4016	0.10	-0.0