Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3994

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,789,142	+		Echvi_3992	0.73	+0.9
4,789,142	+		Echvi_3992	0.73	-0.6
4,789,143	-		Echvi_3992	0.73	+1.4
4,789,143	-		Echvi_3992	0.73	+0.2
4,789,143	-		Echvi_3992	0.73	-0.0
4,789,174	-		Echvi_3992	0.77	-0.1
4,789,258	+		Echvi_3992	0.85	+0.2
4,789,259	-		Echvi_3992	0.85	-0.3
4,789,264	+		Echvi_3992	0.86	-0.0
4,789,366	+				-0.7
4,789,437	+				+0.5
4,789,437	+				+1.0
4,789,500	-		Echvi_3993	0.13	+0.7
4,789,502	-		Echvi_3993	0.13	+0.8
4,789,575	+		Echvi_3993	0.23	-0.9
4,789,575	+		Echvi_3993	0.23	-1.6
4,789,575	+		Echvi_3993	0.23	-0.3
4,789,575	+		Echvi_3993	0.23	-0.8
4,789,575	+		Echvi_3993	0.23	+0.7
4,789,576	-		Echvi_3993	0.23	-0.3
4,789,768	+		Echvi_3993	0.49	+0.9
4,789,876	+		Echvi_3993	0.64	+0.2
4,789,877	-		Echvi_3993	0.64	+0.1
4,789,936	-		Echvi_3993	0.72	+0.6
4,789,952	+		Echvi_3993	0.74	-0.4
4,789,999	-		Echvi_3993	0.80	+0.4
4,790,037	+				+2.1
4,790,038	-		Echvi_3993	0.85	-1.6
4,790,100	-				-0.6
4,790,103	+				-0.0
4,790,133	-				+1.5
4,790,167	+				-0.7
4,790,168	-				+0.2
4,790,168	-				+1.7
4,790,177	+				-1.6
4,790,183	+				-0.2
4,790,184	-				-0.4
4,790,184	-				+1.3
4,790,243	+		Echvi_3994	0.12	-0.7
4,790,325	+		Echvi_3994	0.22	-0.9
4,790,474	+		Echvi_3994	0.39	+2.6
4,790,474	+		Echvi_3994	0.39	-0.5
4,790,495	+		Echvi_3994	0.42	+0.9
4,790,495	+		Echvi_3994	0.42	-0.7
4,790,581	-		Echvi_3994	0.52	+0.2
4,790,608	+		Echvi_3994	0.55	-0.7
4,790,608	+		Echvi_3994	0.55	-0.1
4,790,608	+		Echvi_3994	0.55	-0.1
4,790,736	+		Echvi_3994	0.70	-0.5
4,790,742	+		Echvi_3994	0.70	-0.2
4,790,743	-		Echvi_3994	0.70	+0.4
4,790,757	+		Echvi_3994	0.72	+0.4
4,790,758	-		Echvi_3994	0.72	+0.5
4,790,765	+		Echvi_3994	0.73	+0.8
4,790,771	+		Echvi_3994	0.74	-2.5
4,790,771	+		Echvi_3994	0.74	+1.0
4,790,772	-		Echvi_3994	0.74	-1.0
4,790,772	-		Echvi_3994	0.74	+1.6
4,790,772	-		Echvi_3994	0.74	+0.6
4,790,772	-		Echvi_3994	0.74	-0.4
4,790,774	-		Echvi_3994	0.74	+0.6
4,790,822	+		Echvi_3994	0.80	-0.7
4,790,862	+		Echvi_3994	0.84	+0.5
4,790,868	+		Echvi_3994	0.85	+0.6
4,790,885	+		Echvi_3994	0.87	+0.7
4,790,885	+		Echvi_3994	0.87	+1.4
4,790,888	-		Echvi_3994	0.87	+2.4
4,790,889	+		Echvi_3994	0.87	+0.9
4,790,889	+		Echvi_3994	0.87	-0.0
4,790,890	-		Echvi_3994	0.87	-2.9
4,790,890	-		Echvi_3994	0.87	-0.1
4,790,890	-		Echvi_3994	0.87	+1.3
4,790,920	+				-0.5
4,790,921	-				+0.3
4,790,921	-				-1.0
4,790,921	-				-0.2
4,790,938	+				-0.9
4,790,938	+				-0.5
4,790,942	+				-0.7
4,790,943	-				-0.4
4,790,943	-				+0.2
4,790,943	-				-0.7
4,790,943	-				+0.4
4,790,954	+				+0.1
4,790,955	-				-2.1
4,790,979	+				-2.1
4,790,980	-				-1.2
4,791,067	-		Echvi_3995	0.61	+0.6
4,791,078	+		Echvi_3995	0.73	-0.1
4,791,078	+		Echvi_3995	0.73	-0.5
4,791,095	-				+1.0
4,791,095	-				+1.0
4,791,126	+				-0.6
4,791,137	+				+0.6
4,791,137	+				-0.6
4,791,182	+				+0.3
4,791,183	-				+0.3
4,791,183	-				-0.8
4,791,210	+				-0.0
4,791,211	-				-2.1
4,791,297	+				+0.1
4,791,297	+				-0.3
4,791,297	+				-0.4
4,791,306	+				-0.3
4,791,306	+				-0.7
4,791,307	-				-2.1
4,791,332	-				-0.0
4,791,399	+		Echvi_3996	0.12	+0.9
4,791,399	+		Echvi_3996	0.12	-0.2
4,791,399	+		Echvi_3996	0.12	+1.3
4,791,401	+		Echvi_3996	0.12	+0.7
4,791,401	+		Echvi_3996	0.12	-0.8
4,791,401	+		Echvi_3996	0.12	+0.1
4,791,402	-		Echvi_3996	0.12	-0.4
4,791,444	+		Echvi_3996	0.19	-0.1
4,791,444	+		Echvi_3996	0.19	+0.6
4,791,444	+		Echvi_3996	0.19	+0.9
4,791,444	+		Echvi_3996	0.19	-1.1
4,791,445	-		Echvi_3996	0.19	-0.6
4,791,445	-		Echvi_3996	0.19	+1.9
4,791,445	-		Echvi_3996	0.19	-0.8
4,791,543	+		Echvi_3996	0.33	-0.5
4,791,581	+		Echvi_3996	0.39	+0.3
4,791,582	-		Echvi_3996	0.39	+0.9
4,791,701	+		Echvi_3996	0.57	-1.6
4,791,701	+		Echvi_3996	0.57	+0.6
4,791,702	-		Echvi_3996	0.57	-1.0
4,791,702	-		Echvi_3996	0.57	+0.5
4,791,702	-		Echvi_3996	0.57	+1.9
4,791,742	-		Echvi_3996	0.63	-0.6
4,791,973	-				-0.1