Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3985

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,775,465	+		Echvi_3984	0.69	+0.3
4,775,465	+		Echvi_3984	0.69	-0.8
4,775,466	-		Echvi_3984	0.70	-1.3
4,775,466	-		Echvi_3984	0.70	-0.9
4,775,467	+		Echvi_3984	0.70	+0.3
4,775,467	+		Echvi_3984	0.70	+1.9
4,775,468	-		Echvi_3984	0.70	+0.4
4,775,468	-		Echvi_3984	0.70	+0.9
4,775,487	+		Echvi_3984	0.71	+0.2
4,775,487	+		Echvi_3984	0.71	+0.6
4,775,487	+		Echvi_3984	0.71	-2.3
4,775,488	-		Echvi_3984	0.71	-1.2
4,775,488	-		Echvi_3984	0.71	+0.2
4,775,488	-		Echvi_3984	0.71	+1.4
4,775,651	+		Echvi_3984	0.78	-0.1
4,775,652	-		Echvi_3984	0.78	+0.5
4,775,652	-		Echvi_3984	0.78	+1.5
4,775,676	-		Echvi_3984	0.79	+0.1
4,775,683	-		Echvi_3984	0.80	+0.4
4,775,703	+		Echvi_3984	0.80	-0.9
4,775,703	+		Echvi_3984	0.80	-0.2
4,775,703	+		Echvi_3984	0.80	-0.4
4,775,707	-		Echvi_3984	0.81	-1.5
4,775,780	+		Echvi_3984	0.84	-2.0
4,775,794	+		Echvi_3984	0.85	-0.2
4,775,795	-		Echvi_3984	0.85	-0.5
4,775,827	+		Echvi_3984	0.86	-0.3
4,775,854	-		Echvi_3984	0.87	-0.1
4,775,971	+				-1.5
4,775,972	-				-0.0
4,775,972	-				+0.9
4,776,007	+				-1.1
4,776,028	-				+0.3
4,776,036	-				-0.2
4,776,086	+				+0.9
4,776,098	+				-0.7
4,776,099	-				+0.4
4,776,099	-				+0.1
4,776,104	-				+1.6
4,776,124	+				-1.1
4,776,124	+				+0.7
4,776,124	+				-1.4
4,776,125	-				+0.5
4,776,128	+				-0.2
4,776,128	+				+0.6
4,776,128	+				-0.7
4,776,129	-				+0.9
4,776,129	-				+0.5
4,776,129	-				+1.4
4,776,130	+				-0.7
4,776,130	+				-0.4
4,776,131	-				+1.2
4,776,131	-				+1.9
4,776,135	+				+0.4
4,776,135	+				-2.3
4,776,136	-				+0.4
4,776,136	-				+2.1
4,776,139	+				+0.8
4,776,139	+				+0.9
4,776,140	-				+0.9
4,776,143	-				+0.1
4,776,161	-				+2.2
4,776,179	+				+1.5
4,776,183	+				-1.2
4,776,183	+				+0.9
4,776,186	+				-1.6
4,776,193	+				-0.2
4,776,228	+				+0.1
4,776,229	-				+0.9
4,776,233	-				-0.3
4,776,238	+				+2.1
4,776,245	+				+0.2
4,776,245	+				-0.7
4,776,245	+				+0.9
4,776,245	+				-0.8
4,776,245	+				+2.1
4,776,246	-				-0.1
4,776,250	+				-0.5
4,776,255	+				-0.4
4,776,331	+				+0.7
4,776,331	+				+1.9
4,776,343	-				+1.0
4,776,379	-				-0.8
4,776,400	+				+0.2
4,776,466	+				+2.5
4,776,466	+				+1.0
4,776,467	-				+1.1
4,776,548	+		Echvi_3985	0.14	-0.0
4,776,571	+		Echvi_3985	0.16	+0.3
4,776,571	+		Echvi_3985	0.16	+0.5
4,776,571	+		Echvi_3985	0.16	+0.1
4,776,571	+		Echvi_3985	0.16	+1.9
4,776,572	-		Echvi_3985	0.16	+1.9
4,776,572	-		Echvi_3985	0.16	+2.0
4,776,574	-		Echvi_3985	0.16	-0.9
4,776,638	-		Echvi_3985	0.20	+0.7
4,776,686	+		Echvi_3985	0.24	+0.4
4,776,819	+		Echvi_3985	0.33	+0.3
4,776,820	-		Echvi_3985	0.33	+0.6
4,776,820	-		Echvi_3985	0.33	+1.9
4,776,901	-		Echvi_3985	0.38	+0.2
4,776,901	-		Echvi_3985	0.38	+0.4
4,776,901	-		Echvi_3985	0.38	+0.6
4,776,901	-		Echvi_3985	0.38	-1.5
4,777,086	+		Echvi_3985	0.51	+1.9
4,777,087	-		Echvi_3985	0.51	+1.2
4,777,087	-		Echvi_3985	0.51	+0.3
4,777,221	+		Echvi_3985	0.60	+0.1
4,777,221	+		Echvi_3985	0.60	-0.0
4,777,221	+		Echvi_3985	0.60	-1.1
4,777,222	-		Echvi_3985	0.60	+0.6
4,777,227	-		Echvi_3985	0.61	+2.9
4,777,315	+		Echvi_3985	0.67	-0.6
4,777,378	+		Echvi_3985	0.71	+0.2
4,777,414	+		Echvi_3985	0.73	-0.0
4,777,414	+		Echvi_3985	0.73	-0.3
4,777,414	+		Echvi_3985	0.73	+0.5
4,777,415	-		Echvi_3985	0.73	+0.6
4,777,419	+		Echvi_3985	0.74	-0.4
4,777,465	+		Echvi_3985	0.77	+1.9
4,777,486	+		Echvi_3985	0.78	-2.7
4,777,486	+		Echvi_3985	0.78	-0.2
4,777,502	-		Echvi_3985	0.79	+0.9
4,777,505	+		Echvi_3985	0.80	+0.5
4,777,506	-		Echvi_3985	0.80	-0.1
4,777,522	+		Echvi_3985	0.81	-0.4
4,777,522	+		Echvi_3985	0.81	-1.2
4,777,522	+		Echvi_3985	0.81	+0.4
4,777,523	-		Echvi_3985	0.81	-0.0
4,777,523	-		Echvi_3985	0.81	+2.1
4,777,606	+		Echvi_3985	0.86	-1.1
4,777,606	+		Echvi_3985	0.86	-0.5
4,777,667	-				+0.4
4,777,787	+				-0.3
4,777,874	+				-0.0
4,777,920	+				+0.3
4,777,921	-				+0.6
4,778,018	+				+0.9
4,778,060	+				-1.2
4,778,083	+				-1.7
4,778,416	+		Echvi_3986	0.31	+0.9
4,778,420	+		Echvi_3986	0.31	+0.6
4,778,436	+		Echvi_3986	0.33	-2.6
4,778,481	+		Echvi_3986	0.37	+0.1
4,778,481	+		Echvi_3986	0.37	+0.3
4,778,482	-		Echvi_3986	0.37	+0.3
4,778,482	-		Echvi_3986	0.37	-0.1
4,778,483	+		Echvi_3986	0.37	+2.4
4,778,483	+		Echvi_3986	0.37	-0.5
4,778,484	-		Echvi_3986	0.37	+0.1
4,778,484	-		Echvi_3986	0.37	+0.9
4,778,487	+		Echvi_3986	0.37	-0.8
4,778,491	+		Echvi_3986	0.37	-0.9
4,778,492	-		Echvi_3986	0.37	-1.5
4,778,492	-		Echvi_3986	0.37	+1.1
4,778,591	+		Echvi_3986	0.46	+0.1
4,778,591	+		Echvi_3986	0.46	+0.3
4,778,592	-		Echvi_3986	0.46	-0.0
4,778,715	+		Echvi_3986	0.57	-0.7
4,778,741	+		Echvi_3986	0.59	+0.6
4,778,741	+		Echvi_3986	0.59	+0.2
4,778,742	-		Echvi_3986	0.59	+0.2