Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3895

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,656,341	-				-1.5
4,656,369	-				-0.4
4,656,377	+				-0.4
4,656,377	+				-0.8
4,656,457	+				-1.2
4,656,533	-				-0.2
4,656,563	+				+0.5
4,656,563	+				-0.3
4,656,632	-				-0.5
4,656,693	-				-1.1
4,656,705	-				-0.3
4,656,773	+				+1.3
4,656,773	+				-2.7
4,656,774	-				+1.0
4,656,774	-				-2.8
4,656,774	-				+0.4
4,656,774	-				+1.0
4,656,839	+				-0.2
4,656,938	-				+0.6
4,656,938	-				-0.1
4,656,947	+				-1.2
4,656,953	+				-0.1
4,656,987	+				-0.1
4,657,001	-				+0.7
4,657,001	-				+1.1
4,657,010	-				-1.7
4,657,021	+				+0.1
4,657,025	+				-1.2
4,657,065	+				+1.2
4,657,065	+				-0.6
4,657,089	+				-2.3
4,657,217	+				+0.3
4,657,218	-				+0.3
4,657,218	-				-2.0
4,657,223	-				-2.3
4,657,224	+				+0.8
4,657,224	+				-0.5
4,657,224	+				-0.2
4,657,224	+				-1.6
4,657,224	+				+1.3
4,657,225	-				+0.8
4,657,225	-				-1.1
4,657,232	+				-0.5
4,657,257	+				-0.2
4,657,257	+				-1.7
4,657,303	-				+0.6
4,657,429	+				+0.0
4,657,448	+				+0.5
4,657,448	+				-0.7
4,657,455	-				-1.0
4,657,550	-				+1.0
4,657,641	+		Echvi_3895	0.11	-0.2
4,657,642	-		Echvi_3895	0.11	-0.6
4,657,667	+		Echvi_3895	0.12	-1.7
4,657,667	+		Echvi_3895	0.12	+0.6
4,657,668	-		Echvi_3895	0.12	+0.1
4,657,676	+		Echvi_3895	0.12	+2.3
4,657,718	+		Echvi_3895	0.14	-0.5
4,657,718	+		Echvi_3895	0.14	-0.6
4,657,718	+		Echvi_3895	0.14	-1.2
4,657,718	+		Echvi_3895	0.14	+0.5
4,657,719	-		Echvi_3895	0.14	-0.6
4,657,719	-		Echvi_3895	0.14	-0.4
4,657,719	-		Echvi_3895	0.14	+0.3
4,657,719	-		Echvi_3895	0.14	-0.2
4,657,719	-		Echvi_3895	0.14	+0.8
4,657,726	+		Echvi_3895	0.14	-0.9
4,657,738	+		Echvi_3895	0.14	+0.8
4,657,739	-		Echvi_3895	0.14	+0.5
4,657,739	-		Echvi_3895	0.14	+0.8
4,657,739	-		Echvi_3895	0.14	-0.7
4,657,790	-		Echvi_3895	0.16	+0.6
4,657,852	+		Echvi_3895	0.18	+0.8
4,657,853	-		Echvi_3895	0.18	+1.8
4,657,853	-		Echvi_3895	0.18	-1.5
4,657,960	+		Echvi_3895	0.21	+1.8
4,658,236	+		Echvi_3895	0.29	-0.2
4,658,237	-		Echvi_3895	0.29	-0.2
4,658,237	-		Echvi_3895	0.29	-0.3
4,658,255	+		Echvi_3895	0.30	+0.0
4,658,279	+		Echvi_3895	0.31	-1.6
4,658,292	+		Echvi_3895	0.31	-1.4
4,658,432	-		Echvi_3895	0.35	-0.2
4,658,442	-		Echvi_3895	0.36	-2.1
4,658,453	+		Echvi_3895	0.36	-0.0
4,658,454	-		Echvi_3895	0.36	-1.2
4,658,454	-		Echvi_3895	0.36	-0.3
4,658,454	-		Echvi_3895	0.36	+0.4
4,658,454	-		Echvi_3895	0.36	+0.3
4,658,480	+		Echvi_3895	0.37	-0.0
4,658,481	-		Echvi_3895	0.37	-0.4
4,658,482	+		Echvi_3895	0.37	+0.6
4,658,482	+		Echvi_3895	0.37	-0.1
4,658,516	+		Echvi_3895	0.38	-1.3
4,658,516	+		Echvi_3895	0.38	-0.3
4,658,516	+		Echvi_3895	0.38	-2.9
4,658,516	+		Echvi_3895	0.38	-0.4
4,658,517	-		Echvi_3895	0.38	-1.2
4,658,600	+		Echvi_3895	0.40	+1.5
4,658,601	-		Echvi_3895	0.40	+1.1
4,658,800	-		Echvi_3895	0.46	+0.6
4,658,853	+		Echvi_3895	0.48	-0.4
4,658,859	+		Echvi_3895	0.48	-2.4
4,658,859	+		Echvi_3895	0.48	-0.3
4,658,859	+		Echvi_3895	0.48	-0.7
4,658,859	+		Echvi_3895	0.48	+0.1
4,658,859	+		Echvi_3895	0.48	+1.1
4,658,860	-		Echvi_3895	0.48	-0.1
4,658,860	-		Echvi_3895	0.48	+0.5
4,658,860	-		Echvi_3895	0.48	+0.0
4,658,860	-		Echvi_3895	0.48	-0.6
4,658,861	+		Echvi_3895	0.48	-0.3
4,659,010	-		Echvi_3895	0.53	+0.3
4,659,101	+		Echvi_3895	0.55	+0.7
4,659,101	+		Echvi_3895	0.55	-1.7
4,659,102	-		Echvi_3895	0.55	+0.5
4,659,104	+		Echvi_3895	0.56	+0.2
4,659,104	+		Echvi_3895	0.56	-0.2
4,659,198	-		Echvi_3895	0.58	-1.4
4,659,252	-		Echvi_3895	0.60	+0.3
4,659,404	+		Echvi_3895	0.65	-1.7
4,659,404	+		Echvi_3895	0.65	-0.5
4,659,405	-		Echvi_3895	0.65	+0.1
4,659,405	-		Echvi_3895	0.65	-1.2
4,659,423	-		Echvi_3895	0.65	-0.5
4,659,467	+		Echvi_3895	0.67	+0.6
4,659,468	-		Echvi_3895	0.67	-1.4
4,659,600	+		Echvi_3895	0.71	-1.2
4,659,800	+		Echvi_3895	0.77	-1.0
4,659,801	-		Echvi_3895	0.77	-0.2
4,659,801	-		Echvi_3895	0.77	-2.0
4,659,801	-		Echvi_3895	0.77	-0.3
4,659,801	-		Echvi_3895	0.77	+2.2
4,659,986	+		Echvi_3895	0.82	+0.0
4,659,986	+		Echvi_3895	0.82	-0.1
4,659,987	-		Echvi_3895	0.82	+0.5
4,659,987	-		Echvi_3895	0.82	+1.8
4,660,037	+		Echvi_3895	0.84	-0.2
4,660,038	-		Echvi_3895	0.84	+0.4
4,660,038	-		Echvi_3895	0.84	+2.5
4,660,055	+		Echvi_3895	0.84	+0.5
4,660,095	-		Echvi_3895	0.86	-1.0
4,660,228	+		Echvi_3895	0.90	-1.0
4,660,307	+				-0.2
4,660,307	+				+1.6
4,660,307	+				-0.5
4,660,307	+				-0.8
4,660,308	-				-0.3
4,660,391	+				-1.3
4,660,593	+				-0.3
4,660,601	-				-0.7
4,660,610	+				-0.3
4,660,614	+				+0.4
4,660,615	-				+1.4
4,660,615	-				+0.8
4,660,616	-				-0.7
4,660,682	+				-0.2
4,660,682	+				-0.5
4,660,682	+				-0.8
4,660,682	+				+0.8
4,660,682	+				+0.7
4,660,683	-				-1.5
4,660,683	-				+0.8
4,660,683	-				+1.3
4,660,683	-				-0.7
4,660,683	-				-0.2
4,660,689	-				-0.3
4,660,689	-				-1.5
4,660,689	-				-0.0
4,660,767	+				-0.4
4,660,858	+				-0.5
4,660,884	+				+0.3
4,660,885	-				+0.3
4,660,927	-				-1.7
4,660,927	-				-1.1
4,660,943	+				+0.4
4,660,944	-				-0.7
4,661,013	-		Echvi_3896	0.12	+1.8
4,661,013	-		Echvi_3896	0.12	-0.7
4,661,015	-		Echvi_3896	0.12	+0.8
4,661,020	-		Echvi_3896	0.12	+0.4
4,661,020	-		Echvi_3896	0.12	+0.4