Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3887

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,645,362	-				+0.9
4,645,367	-				+0.5
4,645,410	-				+1.0
4,645,486	-				-0.1
4,645,498	+				-1.2
4,645,498	+				-1.2
4,645,500	+				-1.2
4,645,568	+		Echvi_3887	0.13	-0.2
4,645,569	-		Echvi_3887	0.13	+2.4
4,645,596	+		Echvi_3887	0.16	+1.0
4,645,645	-		Echvi_3887	0.21	-1.0
4,645,662	+		Echvi_3887	0.23	+1.8
4,645,699	+		Echvi_3887	0.26	+0.4
4,645,700	-		Echvi_3887	0.27	+1.7
4,645,700	-		Echvi_3887	0.27	+4.1
4,645,701	+		Echvi_3887	0.27	-0.6
4,645,738	+		Echvi_3887	0.30	+1.2
4,645,738	+		Echvi_3887	0.30	+0.3
4,645,815	+		Echvi_3887	0.38	+0.1
4,645,819	+		Echvi_3887	0.38	-1.2
4,645,820	-		Echvi_3887	0.39	+1.2
4,645,820	-		Echvi_3887	0.39	-0.8
4,645,820	-		Echvi_3887	0.39	+1.4
4,645,885	-		Echvi_3887	0.45	+5.2
4,645,907	+		Echvi_3887	0.47	+0.6
4,645,908	-		Echvi_3887	0.47	+0.6
4,645,908	-		Echvi_3887	0.47	+0.4
4,645,908	-		Echvi_3887	0.47	+0.8
4,645,912	+		Echvi_3887	0.48	+0.2
4,645,913	-		Echvi_3887	0.48	+1.8
4,646,057	+		Echvi_3887	0.62	-1.0
4,646,100	+		Echvi_3887	0.67	+0.8
4,646,171	-		Echvi_3887	0.74	+1.0
4,646,173	-		Echvi_3887	0.74	-0.4
4,646,189	-		Echvi_3887	0.75	+0.7
4,646,191	+		Echvi_3887	0.76	+0.7
4,646,191	+		Echvi_3887	0.76	+0.5
4,646,191	+		Echvi_3887	0.76	-0.0
4,646,192	-		Echvi_3887	0.76	-1.6
4,646,192	-		Echvi_3887	0.76	+0.3
4,646,192	-		Echvi_3887	0.76	+1.1
4,646,212	+		Echvi_3887	0.78	-0.1
4,646,213	-		Echvi_3887	0.78	+0.1
4,646,215	+		Echvi_3887	0.78	+0.6
4,646,216	-		Echvi_3887	0.78	+0.8
4,646,216	-		Echvi_3887	0.78	-0.2
4,646,238	+		Echvi_3887	0.80	+0.7
4,646,239	-		Echvi_3887	0.80	-0.2
4,646,239	-		Echvi_3887	0.80	+0.3
4,646,361	+				-2.0
4,646,362	-				-1.7
4,646,431	+				+0.7
4,646,432	-				-0.4
4,646,472	+				+0.6
4,646,547	+		Echvi_3888	0.12	+0.2
4,646,667	+		Echvi_3888	0.30	-0.7
4,646,668	-		Echvi_3888	0.30	-0.3
4,646,760	+		Echvi_3888	0.43	+0.0
4,646,760	+		Echvi_3888	0.43	-0.4
4,646,760	+		Echvi_3888	0.43	-0.0
4,646,760	+		Echvi_3888	0.43	-0.1
4,646,760	+		Echvi_3888	0.43	+0.5
4,646,760	+		Echvi_3888	0.43	-1.5
4,646,760	+		Echvi_3888	0.43	-0.4
4,646,761	-		Echvi_3888	0.43	-1.7
4,646,761	-		Echvi_3888	0.43	+1.8
4,646,761	-		Echvi_3888	0.43	+2.0
4,646,762	+		Echvi_3888	0.43	-0.9
4,646,762	+		Echvi_3888	0.43	+4.4
4,646,762	+		Echvi_3888	0.43	-1.2
4,646,762	+		Echvi_3888	0.43	-0.4
4,646,762	+		Echvi_3888	0.43	+0.0
4,646,763	-		Echvi_3888	0.43	+0.8
4,646,763	-		Echvi_3888	0.43	-0.0
4,646,763	-		Echvi_3888	0.43	+0.4
4,646,763	-		Echvi_3888	0.43	-0.9
4,646,763	-		Echvi_3888	0.43	+0.5
4,646,763	-		Echvi_3888	0.43	-0.3
4,646,763	-		Echvi_3888	0.43	-0.2
4,646,954	-		Echvi_3888	0.71	-0.3
4,647,141	+				-1.2
4,647,141	+				+1.5
4,647,142	-				-0.4
4,647,143	+				-0.1
4,647,163	+				-0.0
4,647,164	-				-0.3
4,647,165	+				+1.3
4,647,165	+				+0.7
4,647,166	-				-0.2
4,647,166	-				+0.3
4,647,195	+				+1.1
4,647,195	+				-0.0
4,647,196	-				-1.9
4,647,196	-				+1.3
4,647,196	-				-0.2
4,647,196	-				-1.0
4,647,196	-				-0.2
4,647,196	-				-0.5
4,647,228	+				-0.2
4,647,228	+				-0.3
4,647,228	+				-0.1
4,647,229	-				-0.2
4,647,371	+				+0.4
4,647,371	+				-0.2
4,647,431	-				-0.5