Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3883

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,638,512	+		Echvi_3882	0.18	-0.0
4,638,513	-		Echvi_3882	0.18	-1.0
4,638,826	-		Echvi_3882	0.50	-0.7
4,638,852	-		Echvi_3882	0.52	-1.7
4,638,984	-		Echvi_3882	0.66	-0.3
4,638,984	-		Echvi_3882	0.66	+0.6
4,639,036	+		Echvi_3882	0.71	-0.2
4,639,039	-		Echvi_3882	0.71	-1.1
4,639,039	-		Echvi_3882	0.71	-0.5
4,639,039	-		Echvi_3882	0.71	-0.3
4,639,061	+		Echvi_3882	0.74	-1.1
4,639,062	-		Echvi_3882	0.74	-1.3
4,639,062	-		Echvi_3882	0.74	-2.0
4,639,152	+		Echvi_3882	0.83	+1.1
4,639,152	+		Echvi_3882	0.83	+1.3
4,639,153	-		Echvi_3882	0.83	-1.4
4,639,179	-		Echvi_3882	0.86	-0.8
4,639,253	+				-2.5
4,639,253	+				+0.6
4,639,253	+				-1.0
4,639,254	-				-1.4
4,639,298	-				-0.5
4,639,304	+				+0.7
4,639,330	+				+0.1
4,639,331	-				-0.4
4,639,331	-				-1.2
4,639,353	+				+0.7
4,639,382	+				+1.2
4,639,486	+				-0.7
4,639,496	+				-0.3
4,639,541	+		Echvi_3883	0.11	+3.4
4,639,608	+		Echvi_3883	0.28	-0.8
4,639,698	+		Echvi_3883	0.51	-2.0
4,639,698	+		Echvi_3883	0.51	+0.8
4,639,699	-		Echvi_3883	0.51	-2.0
4,639,699	-		Echvi_3883	0.51	-0.5
4,639,699	-		Echvi_3883	0.51	-1.0
4,639,700	+		Echvi_3883	0.52	+0.5
4,639,775	+		Echvi_3883	0.71	-0.7
4,639,776	-		Echvi_3883	0.71	-0.2
4,639,793	+		Echvi_3883	0.75	-0.0
4,639,794	-		Echvi_3883	0.76	-0.8
4,639,796	+		Echvi_3883	0.76	+1.2
4,639,797	-		Echvi_3883	0.76	-2.4
4,639,887	+				-0.3
4,639,922	+				+1.0
4,639,923	-				-1.0
4,639,926	-				-1.3
4,639,966	+				-0.0
4,640,134	+				+0.4
4,640,134	+				+0.2
4,640,134	+				-0.5
4,640,134	+				+0.4
4,640,135	-				+0.1
4,640,135	-				-0.5
4,640,135	-				-0.2
4,640,135	-				+0.9
4,640,163	+				+0.1
4,640,163	+				+1.1
4,640,164	-				+0.8
4,640,164	-				+1.5
4,640,209	-				+0.5
4,640,226	+		Echvi_3884	0.10	-1.5
4,640,308	+		Echvi_3884	0.13	+1.8
4,640,316	-		Echvi_3884	0.14	-0.0
4,640,324	+		Echvi_3884	0.14	+1.2
4,640,324	+		Echvi_3884	0.14	+1.8
4,640,328	+		Echvi_3884	0.14	+0.2
4,640,328	+		Echvi_3884	0.14	-0.7
4,640,402	-		Echvi_3884	0.17	-0.3
4,640,411	+		Echvi_3884	0.17	-0.0
4,640,412	-		Echvi_3884	0.17	+0.3
4,640,412	-		Echvi_3884	0.17	-0.1
4,640,412	-		Echvi_3884	0.17	-0.3
4,640,417	+		Echvi_3884	0.17	-0.1
4,640,438	+		Echvi_3884	0.18	+0.6
4,640,438	+		Echvi_3884	0.18	+1.8
4,640,439	-		Echvi_3884	0.18	+0.1
4,640,439	-		Echvi_3884	0.18	-2.1
4,640,469	+		Echvi_3884	0.19	+0.1
4,640,470	-		Echvi_3884	0.19	-2.1
4,640,470	-		Echvi_3884	0.19	-0.5
4,640,470	-		Echvi_3884	0.19	-0.4
4,640,470	-		Echvi_3884	0.19	+1.8
4,640,470	-		Echvi_3884	0.19	-3.6
4,640,499	+		Echvi_3884	0.20	-1.0
4,640,500	-		Echvi_3884	0.20	+1.5
4,640,580	-		Echvi_3884	0.23	-1.1
4,640,592	-		Echvi_3884	0.24	+0.7
4,640,614	-		Echvi_3884	0.24	-2.1
4,640,618	+		Echvi_3884	0.25	+0.8
4,640,640	+		Echvi_3884	0.25	-0.8
4,640,640	+		Echvi_3884	0.25	+0.5
4,640,643	+		Echvi_3884	0.26	-0.7
4,640,644	-		Echvi_3884	0.26	-0.6
4,640,657	-		Echvi_3884	0.26	+0.5
4,640,683	+		Echvi_3884	0.27	-1.9
4,640,683	+		Echvi_3884	0.27	-0.8
4,640,684	-		Echvi_3884	0.27	+0.1
4,640,685	+		Echvi_3884	0.27	-1.8
4,640,685	+		Echvi_3884	0.27	-0.9
4,640,686	-		Echvi_3884	0.27	+0.3
4,640,706	+		Echvi_3884	0.28	+0.6
4,640,706	+		Echvi_3884	0.28	-1.2
4,640,706	+		Echvi_3884	0.28	+0.1
4,640,706	+		Echvi_3884	0.28	-0.3
4,640,706	+		Echvi_3884	0.28	-0.5
4,640,706	+		Echvi_3884	0.28	-0.2
4,640,706	+		Echvi_3884	0.28	+0.0
4,640,706	+		Echvi_3884	0.28	+1.1
4,640,707	-		Echvi_3884	0.28	-0.7
4,640,707	-		Echvi_3884	0.28	+0.4
4,640,707	-		Echvi_3884	0.28	+0.7
4,640,707	-		Echvi_3884	0.28	+0.2
4,640,707	-		Echvi_3884	0.28	-2.2
4,640,707	-		Echvi_3884	0.28	-0.1
4,640,707	-		Echvi_3884	0.28	+0.6
4,640,707	-		Echvi_3884	0.28	+0.5
4,640,707	-		Echvi_3884	0.28	+0.5
4,640,708	+		Echvi_3884	0.28	-0.2
4,640,708	+		Echvi_3884	0.28	-0.7
4,640,708	+		Echvi_3884	0.28	-1.4
4,640,709	-		Echvi_3884	0.28	+0.3
4,640,732	-		Echvi_3884	0.29	-0.4
4,640,771	+		Echvi_3884	0.30	+1.2
4,640,771	+		Echvi_3884	0.30	+0.8
4,640,772	-		Echvi_3884	0.30	+0.1
4,640,793	+		Echvi_3884	0.31	+0.6
4,640,794	-		Echvi_3884	0.31	-1.2
4,640,802	+		Echvi_3884	0.31	-1.0
4,640,806	-		Echvi_3884	0.31	-0.5
4,640,806	-		Echvi_3884	0.31	+0.3
4,640,853	+		Echvi_3884	0.33	+1.3
4,640,853	+		Echvi_3884	0.33	-0.3
4,640,853	+		Echvi_3884	0.33	+0.3
4,640,853	+		Echvi_3884	0.33	-0.2
4,640,855	+		Echvi_3884	0.33	-2.3
4,640,855	+		Echvi_3884	0.33	+0.3
4,640,855	+		Echvi_3884	0.33	+0.4
4,640,856	-		Echvi_3884	0.33	-0.3