Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3849

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,599,111	+		Echvi_3848	0.30	+1.2
4,599,213	+		Echvi_3848	0.39	-0.1
4,599,214	-		Echvi_3848	0.39	-1.0
4,599,214	-		Echvi_3848	0.39	+1.4
4,599,449	+		Echvi_3848	0.60	+2.6
4,599,786	+				+0.3
4,599,854	+				+0.8
4,599,876	-				+1.1
4,599,957	+				-1.5
4,599,958	-				+1.0
4,599,958	-				-0.5
4,600,060	+				-0.4
4,600,061	-				-0.8
4,600,061	-				+1.0
4,600,063	+				-2.2
4,600,178	+		Echvi_3849	0.13	-0.3
4,600,179	-		Echvi_3849	0.13	-2.1
4,600,329	+		Echvi_3849	0.29	-0.2
4,600,330	-				+1.8
4,600,330	-		Echvi_3849	0.29	+1.6
4,600,330	-		Echvi_3849	0.29	+0.3
4,600,469	+		Echvi_3849	0.44	-0.3
4,600,955	+				+0.2
4,600,989	-				+0.5
4,600,989	-				-0.5
4,600,989	-				-0.8
4,600,993	+				+0.2
4,600,994	-				-0.9
4,601,028	-				-1.0
4,601,035	+				-0.3
4,601,035	+				-0.2
4,601,036	-				+0.6
4,601,058	-				-0.0
4,601,096	+				+0.3
4,601,160	-		Echvi_3850	0.16	+0.3
4,601,225	+		Echvi_3850	0.25	+0.2
4,601,226	-		Echvi_3850	0.25	+2.3
4,601,250	+		Echvi_3850	0.28	+0.3
4,601,250	+		Echvi_3850	0.28	-0.3
4,601,250	+		Echvi_3850	0.28	+0.2
4,601,250	+		Echvi_3850	0.28	-0.7
4,601,250	+		Echvi_3850	0.28	+0.0
4,601,250	+		Echvi_3850	0.28	+0.3
4,601,250	+		Echvi_3850	0.28	-0.5
4,601,251	-		Echvi_3850	0.28	+0.7
4,601,267	+		Echvi_3850	0.30	-1.6
4,601,465	+		Echvi_3850	0.55	-2.2
4,601,465	+		Echvi_3850	0.55	-0.5
4,601,466	-		Echvi_3850	0.55	+1.1
4,601,562	+		Echvi_3850	0.67	-0.7
4,601,603	+		Echvi_3850	0.72	+0.1
4,601,603	+		Echvi_3850	0.72	+0.4
4,601,604	-		Echvi_3850	0.72	+0.1
4,601,644	-		Echvi_3850	0.77	+1.3
4,601,774	+				-1.6
4,601,775	-				+0.1
4,601,830	+				+0.2
4,601,850	+				-0.7
4,601,850	+				+1.1
4,601,874	+				+0.3
4,601,896	+				-0.2
4,601,897	-				-0.3
4,601,950	+				-0.8