Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3779

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,504,686	+		Echvi_3778	0.55	+0.9
4,504,715	-		Echvi_3778	0.57	+0.9
4,504,733	-		Echvi_3778	0.58	+0.6
4,504,736	+		Echvi_3778	0.59	-0.7
4,504,805	-		Echvi_3778	0.63	-0.2
4,504,812	+		Echvi_3778	0.64	+1.0
4,504,813	-		Echvi_3778	0.64	-2.0
4,504,813	-		Echvi_3778	0.64	+0.9
4,504,841	+		Echvi_3778	0.66	-2.3
4,504,849	+		Echvi_3778	0.66	+0.2
4,504,925	-		Echvi_3778	0.71	-0.0
4,504,932	-		Echvi_3778	0.72	-1.1
4,505,114	-		Echvi_3778	0.84	-0.1
4,505,183	+		Echvi_3778	0.89	+0.5
4,505,183	+		Echvi_3778	0.89	+0.2
4,505,215	+				-0.3
4,505,215	+				+0.9
4,505,215	+				-0.3
4,505,216	-				-1.4
4,505,234	-				-1.0
4,505,250	+				+0.3
4,505,250	+				+0.8
4,505,303	-				+0.3
4,505,316	+				-0.5
4,505,329	-				-0.8
4,505,408	-				+0.4
4,505,419	+				+0.9
4,505,419	+				-0.2
4,505,523	-				+0.0
4,505,532	+				-1.2
4,505,630	+				+0.6
4,505,631	-				+0.7
4,505,631	-				+0.5
4,505,641	-				-1.1
4,505,645	-				+1.9
4,505,648	-				-0.3
4,505,648	-				+1.1
4,505,651	+				-0.4
4,505,652	-				-0.1
4,505,654	+				+3.1
4,505,654	+				+0.4
4,505,654	+				-0.2
4,505,654	+				+0.3
4,505,655	-				-0.8
4,505,655	-				-0.5
4,505,655	-				+1.3
4,505,656	+				+0.5
4,505,658	+				+0.2
4,505,659	-				+0.9
4,505,661	+				+1.4
4,505,661	+				+0.0
4,505,662	-				-0.3
4,505,662	-				-2.1
4,505,662	-				-0.8
4,505,674	-				-2.5
4,505,725	+				-1.0
4,505,732	+				-2.1
4,505,733	-				+0.9
4,505,733	-				-1.8
4,505,783	+				+0.3
4,505,783	+				-2.3
4,505,888	-		Echvi_3779	0.15	+0.4
4,505,897	+		Echvi_3779	0.16	+0.4
4,505,948	+		Echvi_3779	0.19	-2.2
4,505,949	-		Echvi_3779	0.19	+0.0
4,506,136	+		Echvi_3779	0.32	+0.9
4,506,136	+		Echvi_3779	0.32	-0.3
4,506,137	-		Echvi_3779	0.32	-1.1
4,506,137	-		Echvi_3779	0.32	-1.6
4,506,137	-		Echvi_3779	0.32	-1.7
4,506,137	-		Echvi_3779	0.32	-0.4
4,506,138	+		Echvi_3779	0.32	-0.2
4,506,138	+		Echvi_3779	0.32	+0.3
4,506,138	+		Echvi_3779	0.32	+0.3
4,506,138	+		Echvi_3779	0.32	-0.3
4,506,210	+		Echvi_3779	0.37	-0.5
4,506,210	+		Echvi_3779	0.37	-1.0
4,506,211	-		Echvi_3779	0.37	+1.3
4,506,211	-		Echvi_3779	0.37	+0.5
4,506,300	+		Echvi_3779	0.43	-0.7
4,506,300	+		Echvi_3779	0.43	-0.9
4,506,301	-		Echvi_3779	0.43	-1.1
4,506,301	-		Echvi_3779	0.43	-1.0
4,506,301	-		Echvi_3779	0.43	-1.0
4,506,304	+		Echvi_3779	0.43	-0.1
4,506,305	-		Echvi_3779	0.43	+0.2
4,506,333	+		Echvi_3779	0.45	-0.5
4,506,333	+		Echvi_3779	0.45	-2.2
4,506,338	-		Echvi_3779	0.46	+0.0
4,506,387	+		Echvi_3779	0.49	-1.1
4,506,388	-		Echvi_3779	0.49	-0.6
4,506,403	+		Echvi_3779	0.50	+1.1
4,506,403	+		Echvi_3779	0.50	+0.2
4,506,403	+		Echvi_3779	0.50	+0.6
4,506,404	-		Echvi_3779	0.50	+1.0
4,506,405	+		Echvi_3779	0.50	+0.6
4,506,406	-		Echvi_3779	0.50	+0.6
4,506,406	-		Echvi_3779	0.50	-1.1
4,506,471	+		Echvi_3779	0.55	-0.8
4,506,472	-		Echvi_3779	0.55	-0.6
4,506,508	+		Echvi_3779	0.57	-1.4
4,506,519	+		Echvi_3779	0.58	-1.3
4,506,622	+		Echvi_3779	0.65	-0.8
4,506,622	+		Echvi_3779	0.65	+0.7
4,506,622	+		Echvi_3779	0.65	-0.1
4,506,623	-		Echvi_3779	0.65	+1.3
4,506,623	-		Echvi_3779	0.65	+1.9
4,506,675	+		Echvi_3779	0.69	-1.0
4,506,678	+		Echvi_3779	0.69	-0.4
4,506,678	+		Echvi_3779	0.69	-0.1
4,506,679	-		Echvi_3779	0.69	+0.8
4,506,679	-		Echvi_3779	0.69	-1.0
4,506,679	-		Echvi_3779	0.69	-2.0
4,506,682	-		Echvi_3779	0.69	-0.9
4,506,697	+		Echvi_3779	0.70	+0.1
4,506,775	+		Echvi_3779	0.76	+0.9
4,506,795	+		Echvi_3779	0.77	+0.4
4,506,796	-		Echvi_3779	0.77	-1.7
4,506,820	-		Echvi_3779	0.79	+1.0
4,506,820	-		Echvi_3779	0.79	-0.5
4,506,831	-		Echvi_3779	0.79	-0.1
4,506,956	+		Echvi_3779	0.88	+1.0
4,506,956	+		Echvi_3779	0.88	-0.5
4,506,961	-		Echvi_3779	0.88	-0.1
4,506,972	+		Echvi_3779	0.89	-2.1
4,506,973	-		Echvi_3779	0.89	+0.5
4,507,058	+				-0.6
4,507,058	+				+0.5
4,507,059	-				-0.7
4,507,059	-				-0.8
4,507,059	-				-0.8
4,507,098	-				-0.5
4,507,106	-				+0.1
4,507,108	-				+1.4
4,507,108	-				-0.3
4,507,108	-				-0.4
4,507,108	-				+0.1
4,507,133	-				+0.6
4,507,165	+				+0.2
4,507,165	+				+2.6
4,507,191	-				+0.3
4,507,292	+				+0.3
4,507,292	+				-0.3
4,507,292	+				-0.9
4,507,293	-				+0.3
4,507,294	+				-1.0
4,507,295	-				-0.4
4,507,295	-				-1.9
4,507,295	-				+0.9
4,507,306	-				+0.0
4,507,314	+				-0.1
4,507,315	-				-0.7
4,507,338	-				+0.3
4,507,368	-				-1.1
4,507,381	+				+0.1
4,507,389	-				-0.1
4,507,440	-				+2.0
4,507,478	+				+0.4
4,507,479	-				+0.0
4,507,479	-				-1.6
4,507,524	+		Echvi_3780	0.11	-0.3
4,507,525	-		Echvi_3780	0.11	-0.5
4,507,532	-		Echvi_3780	0.11	-1.1
4,507,570	+		Echvi_3780	0.13	+0.1
4,507,570	+		Echvi_3780	0.13	-0.1
4,507,580	+		Echvi_3780	0.13	+0.5
4,507,608	+		Echvi_3780	0.14	-1.1
4,507,608	+		Echvi_3780	0.14	-0.4
4,507,622	+		Echvi_3780	0.14	+0.6
4,507,623	-		Echvi_3780	0.14	-0.4
4,507,623	-		Echvi_3780	0.14	-0.1
4,507,651	+		Echvi_3780	0.15	+0.1
4,507,726	-		Echvi_3780	0.17	+0.3
4,507,784	+		Echvi_3780	0.19	-0.1
4,507,784	+		Echvi_3780	0.19	+0.0
4,507,785	-		Echvi_3780	0.19	-1.6
4,507,785	-		Echvi_3780	0.19	+0.2
4,507,815	+		Echvi_3780	0.20	-1.8
4,507,926	+		Echvi_3780	0.23	+0.4
4,507,953	+		Echvi_3780	0.24	-0.1
4,508,010	+		Echvi_3780	0.26	-1.5
4,508,010	+		Echvi_3780	0.26	+1.9