Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3690

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,394,756	+		Echvi_3689	0.42	-0.8
4,394,756	+		Echvi_3689	0.42	+0.2
4,394,757	-		Echvi_3689	0.42	-0.2
4,394,757	-		Echvi_3689	0.42	-0.9
4,394,768	+		Echvi_3689	0.42	-0.2
4,394,768	+		Echvi_3689	0.42	-0.9
4,394,768	+		Echvi_3689	0.42	+0.8
4,394,768	+		Echvi_3689	0.42	-0.2
4,394,769	-		Echvi_3689	0.42	+0.0
4,394,769	-		Echvi_3689	0.42	-1.6
4,394,886	+		Echvi_3689	0.50	+0.2
4,394,931	-		Echvi_3689	0.53	+0.3
4,394,994	-		Echvi_3689	0.57	-1.0
4,395,157	+		Echvi_3689	0.67	+0.7
4,395,206	-		Echvi_3689	0.71	-0.3
4,395,230	+		Echvi_3689	0.72	-1.2
4,395,329	-		Echvi_3689	0.79	+0.5
4,395,385	-		Echvi_3689	0.82	-1.9
4,395,396	+		Echvi_3689	0.83	-1.0
4,395,396	+		Echvi_3689	0.83	+1.8
4,395,397	-		Echvi_3689	0.83	-0.7
4,395,397	-		Echvi_3689	0.83	-0.2
4,395,404	+		Echvi_3689	0.83	-1.7
4,395,404	+		Echvi_3689	0.83	-0.8
4,395,458	+		Echvi_3689	0.87	+0.4
4,395,458	+		Echvi_3689	0.87	-0.6
4,395,458	+		Echvi_3689	0.87	-0.5
4,395,459	-		Echvi_3689	0.87	+0.6
4,395,459	-		Echvi_3689	0.87	+1.6
4,395,459	-		Echvi_3689	0.87	-1.0
4,395,459	-		Echvi_3689	0.87	+1.8
4,395,459	-		Echvi_3689	0.87	+0.2
4,395,552	+				-0.2
4,395,579	+				-0.5
4,395,579	+				+0.5
4,395,580	-				-1.0
4,395,643	+				+1.4
4,395,644	-				-2.9
4,395,644	-				-1.9
4,395,644	-				+0.6
4,395,649	+				-1.8
4,395,649	+				-0.0
4,395,650	-				-1.2
4,395,654	+				+0.6
4,395,655	-				+0.6
4,395,656	+				-1.0
4,395,656	+				+0.9
4,395,656	+				+0.2
4,395,656	+				+0.2
4,395,656	+				+0.8
4,395,657	-				-0.1
4,395,657	-				-0.8
4,395,663	-				-0.8
4,395,722	+				-1.0
4,395,723	-				-0.4
4,395,787	-				-1.2
4,395,841	+				-0.4
4,395,842	-				+1.0
4,395,935	+		Echvi_3690	0.13	-0.8
4,395,983	-		Echvi_3690	0.16	-1.8
4,396,004	+		Echvi_3690	0.18	-1.3
4,396,004	+		Echvi_3690	0.18	-0.5
4,396,005	-		Echvi_3690	0.18	-0.5
4,396,023	-		Echvi_3690	0.19	-0.8
4,396,037	+		Echvi_3690	0.20	+0.1
4,396,038	-		Echvi_3690	0.20	-0.2
4,396,114	-		Echvi_3690	0.25	+0.2
4,396,253	+		Echvi_3690	0.35	+0.8
4,396,253	+		Echvi_3690	0.35	-0.2
4,396,254	-		Echvi_3690	0.35	-0.2
4,396,268	+		Echvi_3690	0.36	+0.8
4,396,330	+		Echvi_3690	0.40	-1.0
4,396,331	-		Echvi_3690	0.40	-0.2
4,396,346	-		Echvi_3690	0.41	-0.4
4,396,346	-		Echvi_3690	0.41	-0.2
4,396,346	-		Echvi_3690	0.41	+1.3
4,396,346	-		Echvi_3690	0.41	-0.6
4,396,408	+		Echvi_3690	0.45	+0.1
4,396,409	-		Echvi_3690	0.46	-0.3
4,396,409	-		Echvi_3690	0.46	-0.9
4,396,409	-		Echvi_3690	0.46	-0.8
4,396,409	-		Echvi_3690	0.46	+0.2
4,396,430	+		Echvi_3690	0.47	+0.2
4,396,430	+		Echvi_3690	0.47	+0.5
4,396,684	+		Echvi_3690	0.64	+0.7
4,396,685	-		Echvi_3690	0.64	+1.2
4,396,685	-		Echvi_3690	0.64	-0.3
4,396,685	-		Echvi_3690	0.64	-0.4
4,396,795	+		Echvi_3690	0.72	-0.6
4,396,817	+		Echvi_3690	0.73	+0.1
4,396,825	-		Echvi_3690	0.74	-1.0
4,396,846	+		Echvi_3690	0.75	-0.2
4,396,847	-		Echvi_3690	0.75	-0.3
4,396,849	+		Echvi_3690	0.76	-1.0
4,396,913	+		Echvi_3690	0.80	+0.7
4,396,916	+		Echvi_3690	0.80	-0.2
4,396,916	+		Echvi_3690	0.80	-1.4
4,396,917	-		Echvi_3690	0.80	-0.9
4,396,918	+		Echvi_3690	0.80	-0.0
4,396,945	+		Echvi_3690	0.82	-1.8
4,396,946	-		Echvi_3690	0.82	-1.6
4,396,958	+		Echvi_3690	0.83	+0.2
4,397,011	+		Echvi_3690	0.87	-0.5
4,397,188	-				-1.0
4,397,309	-				-0.3
4,397,312	+				-0.3
4,397,392	+				+0.4
4,397,493	+				+0.2
4,397,577	-		Echvi_3691	0.22	-0.2
4,397,620	-		Echvi_3691	0.30	+0.2
4,397,622	-		Echvi_3691	0.30	-2.4
4,397,695	+		Echvi_3691	0.43	-1.0
4,397,697	+		Echvi_3691	0.43	+1.4
4,397,697	+		Echvi_3691	0.43	-0.5
4,397,697	+		Echvi_3691	0.43	-1.2
4,397,697	+		Echvi_3691	0.43	+0.4
4,397,697	+		Echvi_3691	0.43	-0.5
4,397,697	+		Echvi_3691	0.43	-1.3
4,397,698	-		Echvi_3691	0.43	+0.3
4,397,698	-		Echvi_3691	0.43	+0.5
4,397,724	+		Echvi_3691	0.48	-1.2
4,397,724	+		Echvi_3691	0.48	+1.0
4,397,859	+		Echvi_3691	0.71	+0.4
4,397,860	-		Echvi_3691	0.71	+0.7
4,397,860	-		Echvi_3691	0.71	-1.2
4,397,994	+				-0.6
4,398,002	-				+1.0
4,398,058	-				-1.5
4,398,069	+				-1.4
4,398,069	+				-1.1
4,398,116	+				-1.0
4,398,184	-				-1.6
4,398,204	-				+0.7
4,398,205	+				-1.8
4,398,206	-				+0.6