Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3677

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,380,632	-		Echvi_3675	0.82	+0.8
4,380,638	-		Echvi_3675	0.83	-0.2
4,380,643	+		Echvi_3675	0.83	-0.2
4,380,643	+		Echvi_3675	0.83	+0.2
4,380,644	-		Echvi_3675	0.83	+0.8
4,380,645	+		Echvi_3675	0.83	+1.0
4,380,646	-		Echvi_3675	0.83	+0.6
4,380,689	-		Echvi_3675	0.88	+0.6
4,380,702	-		Echvi_3675	0.89	+0.6
4,380,702	-		Echvi_3675	0.89	-0.2
4,380,723	+				-0.6
4,380,748	+				+1.6
4,380,749	-				+1.1
4,380,749	-				-1.9
4,380,788	+				+0.0
4,380,789	-				+0.5
4,380,828	+				-1.3
4,380,837	+				-0.1
4,380,837	+				-0.0
4,380,837	+				+0.2
4,380,838	-				-0.3
4,380,838	-				+0.1
4,380,856	-				+1.2
4,380,856	-				+0.0
4,380,953	+		Echvi_3676	0.34	+1.1
4,380,973	-		Echvi_3676	0.41	-1.5
4,380,980	-		Echvi_3676	0.44	-0.1
4,381,021	+		Echvi_3676	0.59	-1.3
4,381,022	-		Echvi_3676	0.59	-0.3
4,381,022	-		Echvi_3676	0.59	+0.5
4,381,077	+		Echvi_3676	0.79	+0.3
4,381,078	-		Echvi_3676	0.79	-0.3
4,381,078	-		Echvi_3676	0.79	+0.6
4,381,104	-		Echvi_3676	0.89	-0.8
4,381,104	-		Echvi_3676	0.89	+2.5
4,381,110	+				-1.2
4,381,111	-				+0.5
4,381,115	+				+0.4
4,381,120	-				-1.8
4,381,132	+				-1.1
4,381,132	+				-0.9
4,381,133	-				+0.9
4,381,133	-				-0.5
4,381,133	-				-1.1
4,381,166	+				-0.3
4,381,166	+				-1.3
4,381,166	+				+0.0
4,381,168	+				+0.8
4,381,168	+				-0.8
4,381,169	-				+1.0
4,381,169	-				+1.8
4,381,246	-				-0.6
4,381,270	-				+0.1
4,381,297	+				+0.1
4,381,380	+				-0.3
4,381,381	-				-0.2
4,381,387	-				-1.1
4,381,426	-				+0.2
4,381,436	-				-0.1
4,381,501	-				+0.1
4,381,557	-				-1.3
4,381,579	+				+0.8
4,381,580	-				+0.5
4,381,597	+				-1.3
4,381,599	+				-0.6
4,381,599	+				+0.3
4,381,600	-				-0.3
4,381,600	-				+1.6
4,381,602	+				-1.0
4,381,602	+				+1.4
4,381,673	-		Echvi_3677	0.18	+0.3
4,381,685	+		Echvi_3677	0.22	-0.8
4,381,686	-		Echvi_3677	0.22	-0.9
4,381,750	-		Echvi_3677	0.39	-1.0
4,381,758	+		Echvi_3677	0.42	-0.1
4,381,758	+		Echvi_3677	0.42	-1.9
4,381,760	+		Echvi_3677	0.42	-0.1
4,381,760	+		Echvi_3677	0.42	+0.5
4,381,760	+		Echvi_3677	0.42	+0.4
4,381,760	+		Echvi_3677	0.42	-0.2
4,381,760	+		Echvi_3677	0.42	-0.1
4,381,761	-		Echvi_3677	0.42	-0.5
4,381,761	-		Echvi_3677	0.42	-0.6
4,381,761	-		Echvi_3677	0.42	-0.8
4,381,769	+		Echvi_3677	0.45	-0.8
4,381,769	+		Echvi_3677	0.45	-0.2
4,381,770	-		Echvi_3677	0.45	-1.3
4,381,770	-		Echvi_3677	0.45	+0.8
4,381,792	-		Echvi_3677	0.51	-1.0
4,381,919	+		Echvi_3677	0.86	-2.0
4,381,920	-		Echvi_3677	0.86	-0.2
4,381,920	-		Echvi_3677	0.86	+0.4
4,382,002	+				+0.4
4,382,002	+				+0.3
4,382,003	-				+0.8
4,382,091	+				-0.1
4,382,101	-				+0.2
4,382,105	+				-0.1
4,382,106	-				-1.3
4,382,106	-				-0.9
4,382,107	+				-3.2
4,382,110	-				+0.6
4,382,110	-				-0.2
4,382,110	-				+0.2
4,382,112	+				-0.8
4,382,112	+				-0.5
4,382,113	-				+0.1
4,382,113	-				+2.6
4,382,209	-				+2.0
4,382,210	+				+0.9
4,382,211	-				-1.0
4,382,238	+				+0.7
4,382,320	+				+1.0
4,382,320	+				-0.5
4,382,380	+		Echvi_3678	0.12	+1.3
4,382,420	-		Echvi_3678	0.16	-2.0
4,382,420	-		Echvi_3678	0.16	+0.1
4,382,420	-		Echvi_3678	0.16	+0.2
4,382,484	-		Echvi_3678	0.22	+0.2
4,382,484	-		Echvi_3678	0.22	-0.7
4,382,505	+		Echvi_3678	0.24	+0.5
4,382,505	+		Echvi_3678	0.24	-1.2
4,382,520	-		Echvi_3678	0.25	-2.1
4,382,531	-		Echvi_3678	0.26	-0.6
4,382,531	-		Echvi_3678	0.26	+0.9
4,382,624	+		Echvi_3678	0.35	-0.5
4,382,665	+		Echvi_3678	0.38	-0.5
4,382,666	-		Echvi_3678	0.39	-0.8
4,382,677	-		Echvi_3678	0.40	-1.5
4,382,677	-		Echvi_3678	0.40	+0.2
4,382,682	+		Echvi_3678	0.40	-0.5
4,382,719	+		Echvi_3678	0.44	-0.2
4,382,719	+		Echvi_3678	0.44	-1.1
4,382,720	-		Echvi_3678	0.44	+0.5
4,382,734	+		Echvi_3678	0.45	+0.0
4,382,734	+		Echvi_3678	0.45	-0.7
4,382,742	+		Echvi_3678	0.46	+0.9
4,382,743	-		Echvi_3678	0.46	+1.0
4,382,805	+		Echvi_3678	0.52	-1.3
4,382,805	+		Echvi_3678	0.52	-0.8
4,382,805	+		Echvi_3678	0.52	-0.5
4,382,805	+		Echvi_3678	0.52	+0.7
4,382,806	-		Echvi_3678	0.52	-1.0
4,382,806	-		Echvi_3678	0.52	+0.1
4,382,838	+		Echvi_3678	0.55	-1.1
4,382,862	+		Echvi_3678	0.57	+0.8
4,382,863	-		Echvi_3678	0.57	+0.6
4,382,863	-		Echvi_3678	0.57	-0.2
4,382,964	+		Echvi_3678	0.66	+0.8