Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3661

Experiment: m.b. Doxycycline hyclate 0.032 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Doxycycline hyclate 0.032 mg/ml
4,347,021	-		Echvi_3659	0.58	+0.3
4,347,044	+		Echvi_3659	0.60	+0.9
4,347,044	+		Echvi_3659	0.60	-1.5
4,347,045	-		Echvi_3659	0.60	+0.1
4,347,055	+		Echvi_3659	0.61	-0.8
4,347,055	+		Echvi_3659	0.61	+0.0
4,347,075	+		Echvi_3659	0.63	-1.0
4,347,109	+		Echvi_3659	0.66	-0.2
4,347,109	+		Echvi_3659	0.66	+0.8
4,347,110	-		Echvi_3659	0.66	+0.5
4,347,110	-		Echvi_3659	0.66	+0.5
4,347,112	-		Echvi_3659	0.67	-1.1
4,347,112	-		Echvi_3659	0.67	+0.5
4,347,112	-		Echvi_3659	0.67	-0.2
4,347,112	-		Echvi_3659	0.67	-0.6
4,347,130	+		Echvi_3659	0.68	+0.8
4,347,144	+		Echvi_3659	0.70	+0.9
4,347,224	-		Echvi_3659	0.77	-0.4
4,347,224	-		Echvi_3659	0.77	-0.5
4,347,226	+		Echvi_3659	0.78	-0.8
4,347,291	-		Echvi_3659	0.84	-0.4
4,347,291	-		Echvi_3659	0.84	-0.5
4,347,352	+		Echvi_3659	0.90	-1.7
4,347,353	-		Echvi_3659	0.90	+1.1
4,347,353	-		Echvi_3659	0.90	-0.0
4,347,353	-		Echvi_3659	0.90	-0.6
4,347,353	-		Echvi_3659	0.90	+0.1
4,347,498	+				-1.3
4,347,543	-				-1.0
4,347,587	+		Echvi_3660	0.17	-0.3
4,347,607	-		Echvi_3660	0.21	+0.5
4,347,637	+		Echvi_3660	0.29	-1.3
4,347,637	+		Echvi_3660	0.29	-1.1
4,347,703	+		Echvi_3660	0.45	-1.2
4,347,704	-		Echvi_3660	0.45	+0.2
4,347,709	+		Echvi_3660	0.46	-2.2
4,347,736	+		Echvi_3660	0.53	-0.4
4,347,779	+		Echvi_3660	0.63	-0.5
4,347,780	-		Echvi_3660	0.63	-0.4
4,347,883	+		Echvi_3660	0.88	-0.4
4,347,884	-		Echvi_3660	0.88	+0.8
4,347,907	-				-0.6
4,347,971	-				+0.8
4,347,985	+				-0.5
4,347,985	+				+1.5
4,347,991	-				+0.3
4,348,104	+				-0.5
4,348,106	+				+0.7
4,348,106	+				+0.7
4,348,106	+				-0.0
4,348,107	-				-1.6
4,348,107	-				+2.2
4,348,107	-				+0.6
4,348,140	+				-1.8
4,348,141	-				-0.3
4,348,206	+				-0.2
4,348,206	+				-0.5
4,348,206	+				-1.4
4,348,207	-				-0.6
4,348,236	-		Echvi_3661	0.10	+0.0
4,348,250	-		Echvi_3661	0.11	+1.5
4,348,267	+		Echvi_3661	0.12	-0.6
4,348,315	-		Echvi_3661	0.14	-0.6
4,348,315	-		Echvi_3661	0.14	+1.2
4,348,315	-		Echvi_3661	0.14	-1.3
4,348,348	+		Echvi_3661	0.16	-0.4
4,348,349	-		Echvi_3661	0.16	+0.8
4,348,393	-		Echvi_3661	0.18	-0.6
4,348,420	+		Echvi_3661	0.19	+3.4
4,348,421	-		Echvi_3661	0.19	+0.2
4,348,441	-		Echvi_3661	0.20	+0.2
4,348,455	+		Echvi_3661	0.21	-1.2
4,348,455	+		Echvi_3661	0.21	+0.2
4,348,457	+		Echvi_3661	0.21	-0.4
4,348,468	-		Echvi_3661	0.21	+0.3
4,348,468	-		Echvi_3661	0.21	-0.5
4,348,474	-		Echvi_3661	0.21	+1.0
4,348,511	-		Echvi_3661	0.23	+1.0
4,348,511	-		Echvi_3661	0.23	+0.1
4,348,532	+		Echvi_3661	0.24	+1.5
4,348,533	-		Echvi_3661	0.24	-0.2
4,348,569	-		Echvi_3661	0.26	-0.7
4,348,576	+		Echvi_3661	0.26	+1.4
4,348,577	-		Echvi_3661	0.26	+0.2
4,348,577	-		Echvi_3661	0.26	+0.5
4,348,637	+		Echvi_3661	0.29	-0.3
4,348,637	+		Echvi_3661	0.29	-0.2
4,348,638	-		Echvi_3661	0.29	-0.1
4,348,663	-		Echvi_3661	0.30	+0.2
4,348,694	+		Echvi_3661	0.32	+1.2
4,348,694	+		Echvi_3661	0.32	+0.1
4,348,695	-		Echvi_3661	0.32	+0.4
4,348,697	+		Echvi_3661	0.32	+0.0
4,348,697	+		Echvi_3661	0.32	+0.8
4,348,698	-		Echvi_3661	0.32	+1.3
4,348,699	+		Echvi_3661	0.32	+1.1
4,348,699	+		Echvi_3661	0.32	+0.8
4,348,700	-		Echvi_3661	0.32	+0.2
4,348,700	-		Echvi_3661	0.32	-1.2
4,348,706	+		Echvi_3661	0.32	-0.7
4,348,706	+		Echvi_3661	0.32	+0.0
4,348,707	-		Echvi_3661	0.32	-0.2
4,348,760	+		Echvi_3661	0.35	+0.2
4,348,760	+		Echvi_3661	0.35	+0.4
4,348,779	+		Echvi_3661	0.36	+0.1
4,348,779	+		Echvi_3661	0.36	-0.7
4,348,844	+		Echvi_3661	0.39	-1.0
4,348,845	-		Echvi_3661	0.39	-0.2
4,348,845	-		Echvi_3661	0.39	+0.8
4,348,860	-		Echvi_3661	0.39	+1.8
4,348,933	-		Echvi_3661	0.43	-2.9
4,348,980	+		Echvi_3661	0.45	-1.8
4,348,981	-		Echvi_3661	0.45	+0.7
4,349,000	+		Echvi_3661	0.46	+0.2
4,349,001	-		Echvi_3661	0.46	+0.7
4,349,032	-		Echvi_3661	0.47	-0.8
4,349,033	+				+0.8
4,349,055	-		Echvi_3661	0.48	+0.2
4,349,055	-		Echvi_3661	0.48	-0.5
4,349,055	-		Echvi_3661	0.48	+1.4
4,349,055	-		Echvi_3661	0.48	-1.2
4,349,056	+		Echvi_3661	0.48	-0.7
4,349,056	+		Echvi_3661	0.48	+0.4
4,349,056	+		Echvi_3661	0.48	+0.2
4,349,056	+		Echvi_3661	0.48	+0.6
4,349,056	+		Echvi_3661	0.48	+0.5
4,349,056	+		Echvi_3661	0.48	-0.9
4,349,056	+		Echvi_3661	0.48	-1.2
4,349,057	-		Echvi_3661	0.48	+1.0
4,349,057	-		Echvi_3661	0.48	-0.8
4,349,057	-		Echvi_3661	0.48	+0.5
4,349,057	-		Echvi_3661	0.48	+0.0
4,349,057	-		Echvi_3661	0.48	+0.2
4,349,057	-		Echvi_3661	0.48	-1.2
4,349,057	-		Echvi_3661	0.48	-0.8
4,349,068	+		Echvi_3661	0.49	-1.2
4,349,068	+		Echvi_3661	0.49	-1.7
4,349,069	-		Echvi_3661	0.49	-0.4
4,349,111	+		Echvi_3661	0.51	-0.1
4,349,227	+		Echvi_3661	0.56	+0.4
4,349,228	-		Echvi_3661	0.56	+1.1
4,349,228	-		Echvi_3661	0.56	-0.5
4,349,266	-		Echvi_3661	0.58	+1.0
4,349,266	-		Echvi_3661	0.58	-0.2
4,349,266	-		Echvi_3661	0.58	-0.8
4,349,354	+		Echvi_3661	0.62	-0.3
4,349,354	+		Echvi_3661	0.62	-0.2
4,349,357	+		Echvi_3661	0.62	+0.7
4,349,419	+		Echvi_3661	0.65	-0.4
4,349,419	+		Echvi_3661	0.65	+0.9
4,349,420	-		Echvi_3661	0.65	+0.2
4,349,421	+		Echvi_3661	0.65	+0.2
4,349,421	+		Echvi_3661	0.65	+0.6
4,349,421	+		Echvi_3661	0.65	-0.1
4,349,422	-		Echvi_3661	0.65	+0.5
4,349,422	-		Echvi_3661	0.65	+2.1
4,349,537	-		Echvi_3661	0.71	+0.4
4,349,539	+		Echvi_3661	0.71	-0.6
4,349,539	+		Echvi_3661	0.71	-0.8
4,349,542	+		Echvi_3661	0.71	+0.3
4,349,542	+		Echvi_3661	0.71	-0.5
4,349,543	-		Echvi_3661	0.71	-0.2
4,349,543	-		Echvi_3661	0.71	+1.0
4,349,625	+		Echvi_3661	0.75	+1.1
4,349,626	-		Echvi_3661	0.75	-0.0
4,349,626	-		Echvi_3661	0.75	-0.6
4,349,684	-		Echvi_3661	0.78	+1.8
4,349,701	+		Echvi_3661	0.78	+0.2
4,349,702	-		Echvi_3661	0.78	+0.4
4,349,718	+		Echvi_3661	0.79	-2.0
4,349,784	+		Echvi_3661	0.82	-0.0
4,349,890	-		Echvi_3661	0.87	-0.5
4,349,899	+		Echvi_3661	0.88	-0.3
4,349,905	-		Echvi_3661	0.88	+0.4
4,349,986	+				-0.5
4,350,010	-				+0.2
4,350,030	+				+0.5
4,350,030	+				-0.5
4,350,031	-				-0.2
4,350,049	-				+1.0
4,350,204	-				-0.7
4,350,204	-				-1.0
4,350,232	+		Echvi_3662	0.11	+1.8
4,350,239	+		Echvi_3662	0.12	-0.6
4,350,244	-		Echvi_3662	0.13	+1.1
4,350,244	-		Echvi_3662	0.13	+1.1
4,350,244	-		Echvi_3662	0.13	+1.2
4,350,244	-		Echvi_3662	0.13	-1.9
4,350,244	-		Echvi_3662	0.13	+0.2
4,350,295	+		Echvi_3662	0.21	+0.0
4,350,314	+		Echvi_3662	0.24	+1.4
4,350,314	+		Echvi_3662	0.24	-0.7
4,350,315	-		Echvi_3662	0.24	+0.5
4,350,315	-		Echvi_3662	0.24	+1.4
4,350,337	+		Echvi_3662	0.27	-2.0
4,350,517	+		Echvi_3662	0.56	+0.8
4,350,517	+		Echvi_3662	0.56	-1.7
4,350,517	+		Echvi_3662	0.56	+0.4
4,350,520	+		Echvi_3662	0.57	+0.5
4,350,520	+		Echvi_3662	0.57	+0.2
4,350,521	-		Echvi_3662	0.57	+0.8
4,350,548	+		Echvi_3662	0.61	+0.1
4,350,576	+		Echvi_3662	0.65	-1.1
4,350,577	-		Echvi_3662	0.66	+0.2
4,350,608	-		Echvi_3662	0.70	+0.6
4,350,689	+		Echvi_3662	0.83	+0.3
4,350,694	+		Echvi_3662	0.84	-1.3
4,350,793	+				-0.8
4,350,796	-				+0.5
4,350,796	-				+0.6
4,350,796	-				-0.1
4,350,809	+				-1.2
4,350,810	-				-2.1
4,350,810	-				+0.3
4,350,810	-				-0.2
4,350,810	-				-0.0
4,350,813	+				-0.5
4,350,818	+				-0.8
4,350,842	+				+0.1
4,350,843	-				-0.5
4,350,843	-				+0.7
4,350,855	+				+0.7
4,350,855	+				+1.8
4,350,855	+				+1.1
4,350,855	+				-0.7
4,350,855	+				+1.2
4,350,856	-				-0.4
4,350,857	+				+0.2
4,350,870	+				-1.1
4,350,871	-				+1.2
4,350,872	+				-0.6
4,350,879	-				-2.6
4,350,900	-				-0.3
4,350,900	-				+0.7
4,350,900	-				+1.2
4,350,943	-				-0.2
4,350,967	-		Echvi_3663	0.10	-2.0
4,351,014	+		Echvi_3663	0.13	-0.3
4,351,015	-		Echvi_3663	0.13	-0.9
4,351,015	-		Echvi_3663	0.13	+0.0
4,351,015	-		Echvi_3663	0.13	-0.2
4,351,041	-		Echvi_3663	0.15	+0.2
4,351,048	-		Echvi_3663	0.15	+0.4
4,351,104	+		Echvi_3663	0.18	+0.2
4,351,105	-		Echvi_3663	0.18	-0.3
4,351,109	+		Echvi_3663	0.19	+0.7
4,351,110	-		Echvi_3663	0.19	-2.3